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Variaous length of inverse folding sequences #143

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what-is-what opened this issue Nov 21, 2024 · 1 comment
Closed

Variaous length of inverse folding sequences #143

what-is-what opened this issue Nov 21, 2024 · 1 comment

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@what-is-what
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We are currently using inverse folding in ESM3.
When we increase the temperature from moderate 0.5 to 2 or 3, we see a wide range of sequence variation, which is very attractive.
However, if the sequence length variation occurs in the process, the number mismatch with the atom coordinate leads to an error.
We want to generate different sequence patterns regardless of the number of atom coordinates.
Is this possible?

@ebetica
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ebetica commented Dec 4, 2024

ESM3 only operates on fixed length prompts.

@ebetica ebetica closed this as completed Dec 27, 2024
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