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fhcrc/microbiome-demo
Please consider adding a License

We would like to use the example data for writing test suites for pplacer package in debian. So please consider adding a license to the data so that we could use them
  • rrrrrrmb
  • 2
  • Opened 
    on Apr 11, 2022
  • #7

fhcrc/microbiome-demo
examples/sqlite/demo.sh fails with current pplacer.

Could someone with some guppy DB experience lend a hand here (@nhoffman, @metasoarous)? # `guppy classify` can build SQLite databases for easy and fast access to # results. guppy classify --mrca-class ...
  • matsen
  • 1
  • Opened 
    on Feb 11, 2014
  • #6

fhcrc/microbiome-demo
guppy kr_heat fails in dev branch of pplacer

I was (perhaps erroneously) running off the dev branch of pplacer (matsen/pplacer@06ce6554cb47c20780497532531a31afdec7883d) and hit this error, both manually and using the pplacer_demo.sh script. $ guppy ...
  • bcclaywell
  • Opened 
    on Feb 6, 2013
  • #5

fhcrc/microbiome-demo
README.md needs to be updated in advanced-new-multiclass

  • matsen
  • Opened 
    on Jun 7, 2012
  • #4

fhcrc/microbiome-demo
shocco is taking commands out of alignment

At least for me, the page at http://fhcrc.github.com/microbiome-demo/ does not have the command description lining up with the command-- it s one click off. I had this problem before when building on ...
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  • matsen
  • 2
  • Opened 
    on Jan 20, 2012
  • #3

fhcrc/microbiome-demo
bring up to date and add rppr convexify

  • matsen
  • 2
  • Opened 
    on Oct 25, 2011
  • #2

fhcrc/microbiome-demo
we should taxit reroot the reference package

This sounds trivial, but we also have to re-run the various samples on the re-rooted package. Another option would just be to run everything on the new refset.
easy
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  • matsen
  • 2
  • Opened 
    on May 26, 2011
  • #1
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