_pkgdown.yml

navbar:
  title: BayesianTools
  type: default
  left:
  - icon: fa-home fa-lg
    href: index.html
  - text: Get Started
    href: articles/BayesianTools.html
  - text: Reference
    href: reference/index.html
  right:
  - icon: fa-github fa-lg
    href: https://github.com/florianhartig/BayesianTools

reference:
- title: All functions
  desc: ~
  contents:
  - '`applySettingsDefault`'
  - '`BayesianTools`'
  - '`bridgesample`'
  - '`checkBayesianSetup`'
  - '`convertCoda`'
  - '`correctThin`'
  - '`correlationPlot`'
  - '`createBayesianSetup`'
  - '`createBetaPrior`'
  - '`createBreakMat`'
  - '`createLikelihood`'
  - '`createMcmcSamplerList`'
  - '`createPosterior`'
  - '`createPrior`'
  - '`createPriorDensity`'
  - '`createProposalGenerator`'
  - '`createSmcSamplerList`'
  - '`createTruncatedNormalPrior`'
  - '`createUniformPrior`'
  - '`DE`'
  - '`DEzs`'
  - '`DIC`'
  - '`DREAM`'
  - '`DREAMzs`'
  - '`gelmanDiagnostics`'
  - '`generateParallelExecuter`'
  - '`generateTestDensityMultiNormal`'
  - '`getCredibleIntervals`'
  - '`getDharmaResiduals`'
  - '`getMetropolisDefaultSettings`'
  - '`getPanels`'
  - '`getPossibleSamplerTypes`'
  - '`getPredictiveDistribution`'
  - '`getPredictiveIntervals`'
  - '`getSample`'
  - '`getVolume`'
  - '`GOF`'
  - '`histMarginal`'
  - '`likelihoodAR1`'
  - '`likelihoodIidNormal`'
  - '`logSumExp`'
  - '`MAP`'
  - '`marginalLikelihood`'
  - '`marginalPlot`'
  - '`mcmcMultipleChains`'
  - '`Metropolis`'
  - '`metropolisRatio`'
  - '`createMixWithDefaults`'
  - '`plotHist`'
  - '`plotSensitivity`'
  - '`plotTimeSeries`'
  - '`plotTimeSeriesResiduals`'
  - '`plotTimeSeriesResults`'
  - '`rescale`'
  - '`runMCMC`'
  - '`sampleEquallySpaced`'
  - '`sampleMetropolis`'
  - '`setupStartProposal`'
  - '`smcSampler`'
  - '`stopParallel`'
  - '`testDensityBanana`'
  - '`testDensityInfinity`'
  - '`testDensityMultiNormal`'
  - '`testDensityNormal`'
  - '`testLinearModel`'
  - '`tracePlot`'
  - '`Twalk`'
  - '`updateProposalGenerator`'
  - '`violinPlot`'
  - '`VSEM`'
  - '`vsemC`'
  - '`VSEMcreateLikelihood`'
  - '`VSEMcreatePAR`'
  - '`VSEMgetDefaults`'
  - '`WAIC`'

articles:
- title: All vignettes
  desc: ~
  contents: '`BayesianTools`'