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Self-organization and symmetry breaking in intestinal organoid development - Materials

This repository contains three branches with materials of the Paper "Self-organization and symmetry breaking in intestinal organoid development":

  • Image Processing Pipeline for 2D/3D organoid segmentation - time course samples
  • Image Processing Pipeline for 2D/3D organoid segmentation - time lapse samples
  • Organoid linking algorithm

Further information are given in the README.md files of the corresponding branches.

Citation

If you decide to use materials from this repository in a published work, please kindly cite us using the following bibliography:

@Article{glaes, AUTHOR = {...}, TITLE = {Self-organization and symmetry breaking in intestinal organoid development}, JOURNAL = {Nature}, VOLUME = {...}, YEAR = {...}, NUMBER = {...}, ARTICLE NUMBER = {...}, URL = {...}, DOI = {...} }

License

MIT License

Copyright (c) 2019 Urs Mayr (FMI), Markus Rempfler (FMI), Dario Vischi (FMI)

You should have received a copy of the MIT License along with the source code. If not, see https://opensource.org/licenses/MIT