s390x.yml

name: Test package on s390x

on:
  push:
    branches:
      - main
      - s390x-testing
  workflow_dispatch:
  
env:
  PKG: 'rhdf5'

jobs:
  install-depdendencies:
    name: Install package dependencies
    runs-on: ubuntu-22.04
    
    steps:
      - name: checkout
        uses: actions/checkout@v4
        
      - name: Set up QEMU
        uses: docker/setup-qemu-action@v3
        with:
          platforms: s390x
        
      - name: Make R library
        run: mkdir -p ${RUNNER_TEMP}/R-lib
        
      - name: Cache Dependencies
        id: cache-deps
        uses: actions/cache@v4
        with:
          path: ${{ runner.temp }}/R-lib
          key: R_lib-s390x-${{ hashFiles('**/DESCRIPTION') }}
          restore-keys: |
            R_lib-s390x-${{ hashFiles('**/DESCRIPTION') }}
            R_lib-s390x-
            
      - name: Run the build process with Docker
        uses: addnab/docker-run-action@v3
        with:
          image: s390x/r-base:latest
          options: |
            --platform linux/s390x
            -v ${{ runner.temp }}/R-lib:/R-lib
            -v ${{ github.workspace }}/../:/build
            --env R_LIBS_USER=/R-lib
            --env PKG=${{ env.PKG }}
          run: |
            uname -a
            echo "options(Ncpus=4L, timeout = 300)" >> ~/.Rprofile
            Rscript -e "install.packages(c('remotes', 'BiocManager'))" \
                    -e "library(remotes)" \
                    -e "pkgs <- remotes::dev_package_deps('/build/${PKG}', dependencies = TRUE)" \
                    -e 'BiocManager::install(pkgs$package, update = TRUE, ask = FALSE)'
            
  check-s390x:
    name: Test package on s390x
    runs-on: ubuntu-22.04
    needs:   install-depdendencies
    steps:

      - name: checkout
        uses: actions/checkout@v4

      - name: Make R library
        run: mkdir -p ${RUNNER_TEMP}/R-lib
        
      - name: Set up QEMU
        uses: docker/setup-qemu-action@v3
        with:
          platforms: s390x

      - name: Cache Dependencies
        id: cache-deps
        uses: actions/cache@v4
        with:
          path: ${{ runner.temp }}/R-lib
          key: R_lib-s390x-${{ hashFiles('**/DESCRIPTION') }}
          restore-keys: |
            R_lib-s390x-${{ hashFiles('**/DESCRIPTION') }}
            R_lib-s390x-

      - name: R CMD INSTALL
        uses: addnab/docker-run-action@v3
        with:
          image: s390x/r-base:latest
          options: |
            --platform linux/s390x
            -v ${{ runner.temp }}/R-lib:/R-lib
            -v ${{ github.workspace }}/../:/build
            --env R_LIBS_USER=/R-lib
            --env PKG=${{ env.PKG }}
            --workdir /build
          run: |
            ls -l
            R CMD INSTALL ${PKG} &> ${PKG}.install-out.txt 
            ls -l
          shell: bash

      - name: R CMD build
        uses: addnab/docker-run-action@v3
        with:
          image: s390x/r-base:latest
          options: |
            --platform linux/s390x
            -v ${{ runner.temp }}/R-lib:/R-lib
            -v ${{ github.workspace }}/../:/build
            --env R_LIBS_USER=/R-lib
            --env PKG=${{ env.PKG }}
            --workdir /build
          run: |
            ls -l "${R_LIBS_USER}"
            R CMD build --keep-empty-dirs --no-resave-data ${PKG}
            ls -l

      - name: R CMD check
        uses: addnab/docker-run-action@v3
        with:
          image: s390x/r-base:latest4
          options: |
            --platform linux/s390x
            -v ${{ runner.temp }}/R-lib:/R-lib
            -v ${{ github.workspace }}/../:/build
            --env R_LIBS_USER=/R-lib
            --env PKG=${{ env.PKG }}
            --workdir /build
          run: |
            ls -l
            R CMD check --install=check:${PKG}.install-out.txt --library="${R_LIBS_USER}" --no-vignettes --timings ${PKG}*.tar.gz
            cat ${PKG}.install-out.txt
            ls -l

      - name: Build Package Binary
        uses: addnab/docker-run-action@v3
        with:
          image: s390x/r-base:latest
          options: |
            --platform linux/s390x
            -v ${{ runner.temp }}/R-lib:/R-lib
            -v ${{ github.workspace }}/../:/build
            --env R_LIBS_USER=/R-lib
            --env PKG=${{ env.PKG }}
            --workdir /build
          run: |
            mkdir -p ${PKG}.buildbin-libdir
            R CMD INSTALL --build --library=${PKG}.buildbin-libdir ${PKG}*.tar.gz
            ls -l

      - uses: actions/upload-artifact@v4
        if: always()
        with:
          name: my-artifact
          path: |
            ~/**/*.tar.gz
            ~/**/*.install-out.txt
            ~/**/*.Rcheck
          if-no-files-found: warn