From 333c24847004aeb66a6f942a4a1e14a516c6caf1 Mon Sep 17 00:00:00 2001
From: AldovdN <90687940+AldovdN@users.noreply.github.com>
Date: Wed, 27 Jul 2022 13:13:19 +0200
Subject: [PATCH] added comments

---
 src/cport/modules/scannet.py | 3 ++-
 1 file changed, 2 insertions(+), 1 deletion(-)

diff --git a/src/cport/modules/scannet.py b/src/cport/modules/scannet.py
index 130efbd..6b7a06f 100644
--- a/src/cport/modules/scannet.py
+++ b/src/cport/modules/scannet.py
@@ -15,7 +15,6 @@
 
 # Total wait (seconds) = WAIT_INTERVAL * NUM_RETRIES
 WAIT_INTERVAL = 30  # seconds
-# any request should never take more than 15min so theoretical max is 90 retries
 NUM_RETRIES = 36
 
 
@@ -133,6 +132,7 @@ def parse_prediction(self, url=None, test_file=None):
             browser = ms.StatefulBrowser()
 
             browser.open(url)
+            # page contains PDB file as a string with results in b_factor column
             pdb_string = re.findall(
                 r"stringContainingTheWholePdbFile = (.*?);",
                 str(browser.page),
@@ -153,6 +153,7 @@ def parse_prediction(self, url=None, test_file=None):
             for atom in res:
                 b_fact = atom.get_bfactor()
 
+            # arbitrary value for active
             if b_fact >= 0.5:
                 prediction_dict["active"].append([res.id[1], b_fact])
             else: