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<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
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<title>CAFE: /mnt/c/Users/befulton/Documents/GIT/CAFE/cafe/cafe_commands.h File Reference</title>
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<li class="navelem"><a class="el" href="dir_815ec9b478b15e8b47eb45d0c766f1f4.html">cafe</a></li> </ul>
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<div class="header">
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<div class="title">cafe_commands.h File Reference</div> </div>
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<div class="textblock"><code>#include <vector></code><br />
<code>#include <string></code><br />
<code>#include <iosfwd></code><br />
<code>#include "<a class="el" href="family_8h_source.html">family.h</a>"</code><br />
</div>
<p><a href="cafe__commands_8h_source.html">Go to the source code of this file.</a></p>
<table class="memberdecls">
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="func-members"></a>
Functions</h2></td></tr>
<tr class="memitem:a1d7bfdc8357f1dd1aab426ce78fb69e3"><td class="memItemLeft" align="right" valign="top">int </td><td class="memItemRight" valign="bottom"><a class="el" href="cafe__commands_8h.html#a1d7bfdc8357f1dd1aab426ce78fb69e3">cafe_cmd_source</a> (<a class="el" href="family_8h.html#a74aeadd6aca74b33994949cd3b7017ea">pCafeParam</a> param, std::vector< std::string > tokens)</td></tr>
<tr class="separator:a1d7bfdc8357f1dd1aab426ce78fb69e3"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:ac1ff1844757ace68bee073533a83a55a"><td class="memItemLeft" align="right" valign="top">int </td><td class="memItemRight" valign="bottom"><a class="el" href="cafe__commands_8h.html#ac1ff1844757ace68bee073533a83a55a">cafe_cmd_list</a> (<a class="el" href="family_8h.html#a74aeadd6aca74b33994949cd3b7017ea">pCafeParam</a> param, std::vector< std::string > tokens)</td></tr>
<tr class="separator:ac1ff1844757ace68bee073533a83a55a"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a8b2fc001384e0d3c6b9be92650296efe"><td class="memItemLeft" align="right" valign="top">int </td><td class="memItemRight" valign="bottom"><a class="el" href="cafe__commands_8h.html#a8b2fc001384e0d3c6b9be92650296efe">cafe_cmd_echo</a> (<a class="el" href="family_8h.html#a74aeadd6aca74b33994949cd3b7017ea">pCafeParam</a> param, std::vector< std::string > tokens)</td></tr>
<tr class="separator:a8b2fc001384e0d3c6b9be92650296efe"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a12e6bbaf64d232b049afc8320e618e12"><td class="memItemLeft" align="right" valign="top">int </td><td class="memItemRight" valign="bottom"><a class="el" href="cafe__commands_8h.html#a12e6bbaf64d232b049afc8320e618e12">cafe_cmd_date</a> (<a class="el" href="family_8h.html#a74aeadd6aca74b33994949cd3b7017ea">pCafeParam</a> param, std::vector< std::string > tokens)</td></tr>
<tr class="separator:a12e6bbaf64d232b049afc8320e618e12"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a92f695a37bd42b626b1bd43c2daa2d7e"><td class="memItemLeft" align="right" valign="top">int </td><td class="memItemRight" valign="bottom"><a class="el" href="cafe__commands_8h.html#a92f695a37bd42b626b1bd43c2daa2d7e">cafe_cmd_exit</a> (<a class="el" href="family_8h.html#a74aeadd6aca74b33994949cd3b7017ea">pCafeParam</a> param, std::vector< std::string > tokens)</td></tr>
<tr class="separator:a92f695a37bd42b626b1bd43c2daa2d7e"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a83bf15faf005ce18f8207893de62b2ce"><td class="memItemLeft" align="right" valign="top">int </td><td class="memItemRight" valign="bottom"><a class="el" href="cafe__commands_8h.html#a83bf15faf005ce18f8207893de62b2ce">cafe_cmd_gainloss</a> (<a class="el" href="family_8h.html#a74aeadd6aca74b33994949cd3b7017ea">pCafeParam</a> param, std::vector< std::string > tokens)</td></tr>
<tr class="separator:a83bf15faf005ce18f8207893de62b2ce"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:ac1ed4ef75f3a0677cea6a5f35fc0f83e"><td class="memItemLeft" align="right" valign="top">int </td><td class="memItemRight" valign="bottom"><a class="el" href="cafe__commands_8h.html#ac1ed4ef75f3a0677cea6a5f35fc0f83e">cafe_cmd_generate_random_family</a> (<a class="el" href="family_8h.html#a74aeadd6aca74b33994949cd3b7017ea">pCafeParam</a> param, std::vector< std::string > tokens)</td></tr>
<tr class="separator:ac1ed4ef75f3a0677cea6a5f35fc0f83e"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:aa8a41a2eb004f7f58059a2f76c1ae979"><td class="memItemLeft" align="right" valign="top">int </td><td class="memItemRight" valign="bottom"><a class="el" href="cafe__commands_8h.html#aa8a41a2eb004f7f58059a2f76c1ae979">cafe_shell_dispatch_command</a> (char *cmd)</td></tr>
<tr class="separator:aa8a41a2eb004f7f58059a2f76c1ae979"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a2bfa532bad5b33246c667e1f7e8ddec5"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="cafe__commands_8h.html#a2bfa532bad5b33246c667e1f7e8ddec5">list_commands</a> (std::ostream &ost)</td></tr>
<tr class="separator:a2bfa532bad5b33246c667e1f7e8ddec5"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a84b7b60c6cfa36b6cadbc0cdc8845f7f"><td class="memItemLeft" align="right" valign="top">std::vector< std::string > </td><td class="memItemRight" valign="bottom"><a class="el" href="cafe__commands_8h.html#a84b7b60c6cfa36b6cadbc0cdc8845f7f">tokenize</a> (std::string s)</td></tr>
<tr class="separator:a84b7b60c6cfa36b6cadbc0cdc8845f7f"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:aa815aa35cb1ab8394c7107036deae1eb"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="cafe__commands_8h.html#aa815aa35cb1ab8394c7107036deae1eb">clear_tree_viterbis</a> (<a class="el" href="family_8h.html#a6a4ec1f259847cbd066832bc18512d2f">pCafeTree</a> psum)</td></tr>
<tr class="separator:aa815aa35cb1ab8394c7107036deae1eb"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a1eef17676a8e71d3ece9e5d1b20bc7e8"><td class="memItemLeft" align="right" valign="top">int </td><td class="memItemRight" valign="bottom"><a class="el" href="cafe__commands_8h.html#a1eef17676a8e71d3ece9e5d1b20bc7e8">get_num_trials</a> (std::vector< std::string > args)</td></tr>
<tr class="separator:a1eef17676a8e71d3ece9e5d1b20bc7e8"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:abc0614f4587f81c8eefb4c88270c031d"><td class="memItemLeft" align="right" valign="top">int </td><td class="memItemRight" valign="bottom"><a class="el" href="cafe__commands_8h.html#abc0614f4587f81c8eefb4c88270c031d">write_family_gainloss</a> (std::ostream &ofst, std::string family_id, <a class="el" href="family_8h.html#a6a4ec1f259847cbd066832bc18512d2f">pCafeTree</a> tree1, <a class="el" href="family_8h.html#a6a4ec1f259847cbd066832bc18512d2f">pCafeTree</a> tree2)</td></tr>
<tr class="separator:abc0614f4587f81c8eefb4c88270c031d"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a42a737dbfebe0cedb89344f3c397923e"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="cafe__commands_8h.html#a42a737dbfebe0cedb89344f3c397923e">set_node_familysize</a> (<a class="el" href="family_8h.html#a6a4ec1f259847cbd066832bc18512d2f">pCafeTree</a> tree, int **node_family_sizes, int i)</td></tr>
<tr class="separator:a42a737dbfebe0cedb89344f3c397923e"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:aeb6a15146efd70cce81611392a56e3e6"><td class="memItemLeft" align="right" valign="top"><a class="el" href="utils_8h.html#ad73ff6d7497dcfb930530cd89ce5a8c7">pArrayList</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="cafe__commands_8h.html#aeb6a15146efd70cce81611392a56e3e6">get_clusters</a> (int parameterized_k_value, int num_families, double *k_weights)</td></tr>
<tr class="separator:aeb6a15146efd70cce81611392a56e3e6"><td class="memSeparator" colspan="2"> </td></tr>
</table>
<h2 class="groupheader">Function Documentation</h2>
<a id="a12e6bbaf64d232b049afc8320e618e12"></a>
<h2 class="memtitle"><span class="permalink"><a href="#a12e6bbaf64d232b049afc8320e618e12">§ </a></span>cafe_cmd_date()</h2>
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<td class="memname">int cafe_cmd_date </td>
<td>(</td>
<td class="paramtype"><a class="el" href="family_8h.html#a74aeadd6aca74b33994949cd3b7017ea">pCafeParam</a> </td>
<td class="paramname"><em>param</em>, </td>
</tr>
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<td class="paramkey"></td>
<td></td>
<td class="paramtype">std::vector< std::string > </td>
<td class="paramname"><em>tokens</em> </td>
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<td></td>
<td>)</td>
<td></td><td></td>
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</div><div class="memdoc">
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<a id="a8b2fc001384e0d3c6b9be92650296efe"></a>
<h2 class="memtitle"><span class="permalink"><a href="#a8b2fc001384e0d3c6b9be92650296efe">§ </a></span>cafe_cmd_echo()</h2>
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<td class="memname">int cafe_cmd_echo </td>
<td>(</td>
<td class="paramtype"><a class="el" href="family_8h.html#a74aeadd6aca74b33994949cd3b7017ea">pCafeParam</a> </td>
<td class="paramname"><em>param</em>, </td>
</tr>
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<td class="paramkey"></td>
<td></td>
<td class="paramtype">std::vector< std::string > </td>
<td class="paramname"><em>tokens</em> </td>
</tr>
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<td></td>
<td>)</td>
<td></td><td></td>
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<a id="a92f695a37bd42b626b1bd43c2daa2d7e"></a>
<h2 class="memtitle"><span class="permalink"><a href="#a92f695a37bd42b626b1bd43c2daa2d7e">§ </a></span>cafe_cmd_exit()</h2>
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<td class="memname">int cafe_cmd_exit </td>
<td>(</td>
<td class="paramtype"><a class="el" href="family_8h.html#a74aeadd6aca74b33994949cd3b7017ea">pCafeParam</a> </td>
<td class="paramname"><em>param</em>, </td>
</tr>
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<td class="paramkey"></td>
<td></td>
<td class="paramtype">std::vector< std::string > </td>
<td class="paramname"><em>tokens</em> </td>
</tr>
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<td></td>
<td>)</td>
<td></td><td></td>
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</div><div class="memdoc">
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<a id="a83bf15faf005ce18f8207893de62b2ce"></a>
<h2 class="memtitle"><span class="permalink"><a href="#a83bf15faf005ce18f8207893de62b2ce">§ </a></span>cafe_cmd_gainloss()</h2>
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<td class="memname">int cafe_cmd_gainloss </td>
<td>(</td>
<td class="paramtype"><a class="el" href="family_8h.html#a74aeadd6aca74b33994949cd3b7017ea">pCafeParam</a> </td>
<td class="paramname"><em>param</em>, </td>
</tr>
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<td class="paramkey"></td>
<td></td>
<td class="paramtype">std::vector< std::string > </td>
<td class="paramname"><em>tokens</em> </td>
</tr>
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<td></td>
<td>)</td>
<td></td><td></td>
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</div><div class="memdoc">
</div>
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<a id="ac1ed4ef75f3a0677cea6a5f35fc0f83e"></a>
<h2 class="memtitle"><span class="permalink"><a href="#ac1ed4ef75f3a0677cea6a5f35fc0f83e">§ </a></span>cafe_cmd_generate_random_family()</h2>
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<td class="memname">int cafe_cmd_generate_random_family </td>
<td>(</td>
<td class="paramtype"><a class="el" href="family_8h.html#a74aeadd6aca74b33994949cd3b7017ea">pCafeParam</a> </td>
<td class="paramname"><em>param</em>, </td>
</tr>
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<td class="paramkey"></td>
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<td class="paramtype">std::vector< std::string > </td>
<td class="paramname"><em>tokens</em> </td>
</tr>
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<td></td>
<td>)</td>
<td></td><td></td>
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</div><div class="memdoc">
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<a id="ac1ff1844757ace68bee073533a83a55a"></a>
<h2 class="memtitle"><span class="permalink"><a href="#ac1ff1844757ace68bee073533a83a55a">§ </a></span>cafe_cmd_list()</h2>
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<td class="memname">int cafe_cmd_list </td>
<td>(</td>
<td class="paramtype"><a class="el" href="family_8h.html#a74aeadd6aca74b33994949cd3b7017ea">pCafeParam</a> </td>
<td class="paramname"><em>param</em>, </td>
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<td class="paramkey"></td>
<td></td>
<td class="paramtype">std::vector< std::string > </td>
<td class="paramname"><em>tokens</em> </td>
</tr>
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<td></td>
<td>)</td>
<td></td><td></td>
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<a id="a1d7bfdc8357f1dd1aab426ce78fb69e3"></a>
<h2 class="memtitle"><span class="permalink"><a href="#a1d7bfdc8357f1dd1aab426ce78fb69e3">§ </a></span>cafe_cmd_source()</h2>
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<td class="memname">int cafe_cmd_source </td>
<td>(</td>
<td class="paramtype"><a class="el" href="family_8h.html#a74aeadd6aca74b33994949cd3b7017ea">pCafeParam</a> </td>
<td class="paramname"><em>param</em>, </td>
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<td class="paramtype">std::vector< std::string > </td>
<td class="paramname"><em>tokens</em> </td>
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<h2 class="memtitle"><span class="permalink"><a href="#aa8a41a2eb004f7f58059a2f76c1ae979">§ </a></span>cafe_shell_dispatch_command()</h2>
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<td class="memname">int cafe_shell_dispatch_command </td>
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<td class="paramtype">char * </td>
<td class="paramname"><em>cmd</em></td><td>)</td>
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<h2 class="memtitle"><span class="permalink"><a href="#aa815aa35cb1ab8394c7107036deae1eb">§ </a></span>clear_tree_viterbis()</h2>
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<td class="memname">void clear_tree_viterbis </td>
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<td class="paramtype"><a class="el" href="family_8h.html#a6a4ec1f259847cbd066832bc18512d2f">pCafeTree</a> </td>
<td class="paramname"><em>psum</em></td><td>)</td>
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<h2 class="memtitle"><span class="permalink"><a href="#aeb6a15146efd70cce81611392a56e3e6">§ </a></span>get_clusters()</h2>
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<td class="memname"><a class="el" href="utils_8h.html#ad73ff6d7497dcfb930530cd89ce5a8c7">pArrayList</a> get_clusters </td>
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<td class="paramtype">int </td>
<td class="paramname"><em>parameterized_k_value</em>, </td>
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<td class="paramtype">int </td>
<td class="paramname"><em>num_families</em>, </td>
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<td class="paramtype">double * </td>
<td class="paramname"><em>k_weights</em> </td>
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<td>)</td>
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<h2 class="memtitle"><span class="permalink"><a href="#a1eef17676a8e71d3ece9e5d1b20bc7e8">§ </a></span>get_num_trials()</h2>
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<td class="memname">int get_num_trials </td>
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<td class="paramtype">std::vector< std::string > </td>
<td class="paramname"><em>args</em></td><td>)</td>
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<h2 class="memtitle"><span class="permalink"><a href="#a2bfa532bad5b33246c667e1f7e8ddec5">§ </a></span>list_commands()</h2>
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<td class="memname">void list_commands </td>
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<td class="paramname"><em>ost</em></td><td>)</td>
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<h2 class="memtitle"><span class="permalink"><a href="#a42a737dbfebe0cedb89344f3c397923e">§ </a></span>set_node_familysize()</h2>
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<td class="memname">void set_node_familysize </td>
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<td class="paramtype"><a class="el" href="family_8h.html#a6a4ec1f259847cbd066832bc18512d2f">pCafeTree</a> </td>
<td class="paramname"><em>tree</em>, </td>
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<td></td>
<td class="paramtype">int ** </td>
<td class="paramname"><em>node_family_sizes</em>, </td>
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<td class="paramtype">int </td>
<td class="paramname"><em>i</em> </td>
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<td>)</td>
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<h2 class="memtitle"><span class="permalink"><a href="#a84b7b60c6cfa36b6cadbc0cdc8845f7f">§ </a></span>tokenize()</h2>
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<td class="memname">std::vector<std::string> tokenize </td>
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<td class="paramname"><em>s</em></td><td>)</td>
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<h2 class="memtitle"><span class="permalink"><a href="#abc0614f4587f81c8eefb4c88270c031d">§ </a></span>write_family_gainloss()</h2>
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<td class="memname">int write_family_gainloss </td>
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<td class="paramkey"></td>
<td></td>
<td class="paramtype">std::string </td>
<td class="paramname"><em>family_id</em>, </td>
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<td class="paramkey"></td>
<td></td>
<td class="paramtype"><a class="el" href="family_8h.html#a6a4ec1f259847cbd066832bc18512d2f">pCafeTree</a> </td>
<td class="paramname"><em>tree1</em>, </td>
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<td class="paramkey"></td>
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<td class="paramtype"><a class="el" href="family_8h.html#a6a4ec1f259847cbd066832bc18512d2f">pCafeTree</a> </td>
<td class="paramname"><em>tree2</em> </td>
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<td>)</td>
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