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ROG_utils.py
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1266 lines (1174 loc) · 58.1 KB
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import os
# from torch import tensor
# from torch.distributed.distributed_c10d import recv
import socket
import queue
import random
import threading
import pickle
import multiprocessing as mp
import time
from utils import AverageMeter, accuracy, mkdir_p, savefig
import torch
# from math import cos, pi
import numpy as np
from DEFSGDM.DEFSGDM import compress_cost, decompress_cost, serialize, deserialize
import zlib
from torch.optim.lr_scheduler import MultiStepLR
# from tqdm import tqdm
import math
from operator import itemgetter
import logging
logging.basicConfig(format='%(asctime)s %(message)s', level=logging.DEBUG)
# import datetime
#from sympy import *
rows_per_transmission=1000
PRINT_LOCK = threading.Lock()
MAX_RECV_SIZE=2*1024*1024
MTA_static=[1.0,1.0,0.5,0.38197,0.32,0.27551,
0.24512,0.22191,0.203456,0.188348,0.175699,
0.164921,0.155602,0.147449,0.140243,0.133819,
0.128049,0.122833,0.11809,0.113755,0.109774,
0.106105,0.102708,0.0995547,0.096617,0.0938728,
0.0913025,0.0888893,0.0866184,0.084477,0.0824538,
0.0805386,0.0787228,0.0769982,0.075358,0.0737957,
0.0723056,0.0708827,0.0695222,0.0682199,0.066972]
Gradient_Value_static = [0.0,0.0,0.0,0.0,0.0,0.03,
0.05,0.06,0.05,0.07,0.075,
0.085,0.09,0.095,0.10,0.102,
0.104,0.106,0.107,0.108,0.11,
0.11,0.111,0.111,0.112,0.112,
0.112,0.113,0.113,0.113,0.113,
0.114,0.114,0.114,0.114,0.114,
0.115,0.115,0.115,0.115,0.115]
Gradient_Value=0.0
old_print = print
def print(*args, **kwargs):
with PRINT_LOCK:
return old_print(*args, **kwargs)
def MTA(threshold):
global Gradient_Value
## (1-P)**(S-1)=P
if threshold<len(MTA_static):
Gradient_Value = Gradient_Value_static[threshold]
return MTA_static[threshold]
else:
print("unsupported threshold!",flush=True)
exit(0)
def freeze_bn(m):
if isinstance(m, torch.nn.LayerNorm) or isinstance(m, torch.nn.BatchNorm2d):
m.training = False
m.track_running_stats = True
TCP_NUM_SIZE=4
class TCPMessageStream:
NUM_SIZE=4
BYTES_LEAST = 4
BYTES_ID_DEFAULT = 4
BYTES_TIMEOUT = 4
def __init__(self,sock:socket.socket):
self.sock=sock
self.send_queue=queue.Queue()
self.finish_queue=queue.Queue()
self.recv_buffer = bytearray()
self.timeout_recv_buffer = bytearray()
self.total_recved = 0
self.timeout_send_meter = AverageMeter()
self.blocking_send_meter = AverageMeter()
self.send_lock = threading.Lock()
self.recv_lock = threading.Lock()
self.sock.setblocking(True)
def set_timeoutsock(self, timeout_sock:socket.socket):
self.timeout_sock = timeout_sock
def get_unique_id_bytes(self, msg, length):
s = bytes(os.urandom(length))
attempt_times = 0
while msg.find(s) >= 0:
s = bytes(os.urandom(length))
attempt_times += 1
if attempt_times % 10 == 0:
length += 1
print('Warning attempt to get unique id for too many times')
return s
def send_with_timeout(self, msg, extra_msg,timeout, least_bytes, info=''):
assert msg is not None
stime = time.time()
msize = len(msg)
if timeout <= 0.0:
timeout = 0.0
msg = msg[: least_bytes]
else:
timeout = int(timeout * 10) / 10.
bytes_id = self.get_unique_id_bytes(msg, self.BYTES_ID_DEFAULT)
headers = int(least_bytes).to_bytes(self.BYTES_LEAST, "big") + int(len(msg)).to_bytes(self.NUM_SIZE, "big") + int(timeout * 10).to_bytes(self.BYTES_TIMEOUT, 'big') + int(len(extra_msg)).to_bytes(self.NUM_SIZE, "big") + extra_msg + bytes_id
assert least_bytes <= len(msg), f"least {least_bytes} total {len(msg)}"
# The bytes representing the end of the transmission
self.send(headers)
t_report_header = time.time()
if timeout <= 0.0:
_msize = len(msg)
msg = _msize.to_bytes(self.NUM_SIZE, "big") + msg
self.sock.sendall(msg)
t_timeout_send = time.time()
transmitted_bytes = least_bytes
else:
self.timeout_sock.settimeout(timeout)
try:
self.timeout_sock.sendall(bytes_id + msg + bytes_id)
t_timeout_send = time.time()
except socket.timeout:
t_timeout_send = time.time()
transmitted_bytes = pickle.loads(self.recv())
self.timeout_sock.settimeout(None)
t_get_transmitted = time.time()
print(info, f'Sending with timeout {timeout:.2E} report_header {t_report_header-stime:.2f} timeout_send {t_timeout_send-t_report_header:.2f} get_transmitted {t_get_transmitted-t_timeout_send:.2f} \n First transmitted {transmitted_bytes} total {msize} least {least_bytes} {bytes_id}')
if t_get_transmitted - t_timeout_send > 0.5:
print('Warning: send end bytes takes too long')
# Send remaining
if transmitted_bytes < least_bytes:
self.send(msg[transmitted_bytes: least_bytes])
transmitted_bytes = least_bytes
t_send_remaining = time.time()
print(info, f'Sending with timeout {timeout} send_remaining {t_send_remaining-t_get_transmitted:.2f} Finally transmitted {transmitted_bytes} least {least_bytes}')
return transmitted_bytes
def recv_with_timeout(self, info=''):
stime = time.time()
# The ending bytes of this transmission
headers = self.recv(info)
t_get_headers = time.time()
least_bytes = int.from_bytes(headers[: self.BYTES_LEAST], 'big')
if least_bytes == 0:
print("recv early break")
return headers[self.BYTES_LEAST:],[],False
msize = int.from_bytes(headers[self.BYTES_LEAST: self.BYTES_LEAST+self.NUM_SIZE], 'big')
timeout = int.from_bytes(headers[self.BYTES_LEAST+self.NUM_SIZE: self.BYTES_LEAST+self.NUM_SIZE+self.BYTES_TIMEOUT], 'big') / 10. # to keep decimal fraction part of the timeout
extra_msize = int.from_bytes(headers[self.BYTES_LEAST+self.NUM_SIZE+self.BYTES_TIMEOUT: self.BYTES_LEAST+2*self.NUM_SIZE+self.BYTES_TIMEOUT], 'big')
extra_msg = headers[self.BYTES_LEAST+2*self.NUM_SIZE+self.BYTES_TIMEOUT:self.BYTES_LEAST+2*self.NUM_SIZE+self.BYTES_TIMEOUT+extra_msize]
bytes_id = headers[self.BYTES_LEAST+2*self.NUM_SIZE+self.BYTES_TIMEOUT+extra_msize:]
assert least_bytes <= msize, f'least_bytes {least_bytes} total bytes {msize}'
self.timeout_sock.settimeout(None)
if timeout <= 0.0:
self.timeout_recv_buffer = self.timeout_recv_buffer[:0]
self.timeout_recv_buffer += self.recv(info)
transmitted_bytes = len(self.timeout_recv_buffer)
t_timeout_recv = time.time()
else:
# get real start position
while self.timeout_recv_buffer.find(bytes_id) < 0:
self.timeout_recv_buffer += self.timeout_sock.recv(1024)
start = self.timeout_recv_buffer.find(bytes_id)
self.timeout_recv_buffer = self.timeout_recv_buffer[start + len(bytes_id):]
# recv send_with_timeout; can break due to either complete transmission or timeout
start_pos = -100 * len(bytes_id)
while self.timeout_recv_buffer.find(bytes_id, start_pos) < 0:
remain_time = (t_get_headers + timeout) - time.time()
if remain_time <= 0.:
break
self.timeout_sock.settimeout(remain_time)
try:
self.timeout_recv_buffer += self.timeout_sock.recv(1024)
except socket.timeout:
break
self.timeout_sock.settimeout(None)
self.timeout_recv_buffer = self.timeout_recv_buffer[: msize]
transmitted_bytes = len(self.timeout_recv_buffer)
t_timeout_recv = time.time()
self.send(pickle.dumps(transmitted_bytes))
# report the transmitted bytes to the sender to decide whether to transmit remaining bytes
t_report_transmitted = time.time()
print(info, f'recv with timeout {timeout} get_id {t_get_headers - stime:.2f} timeout_recv {t_timeout_recv-t_get_headers:.2f} report_transmitted {t_report_transmitted - t_timeout_recv:.2f} transmitted {transmitted_bytes} least {least_bytes} {bytes_id}')
if t_report_transmitted - t_timeout_recv > 0.5:
print('Warning: send transmitted bytes takes too long')
# assert (t_report_transmitted - stime) < t_timeout_recv - stime + 2, 'Warning: report transmitted takes too long'
if transmitted_bytes < least_bytes:
while len(self.timeout_recv_buffer) < least_bytes:
self.timeout_recv_buffer += self.recv()
assert len(self.timeout_recv_buffer) == least_bytes
transmitted_bytes = least_bytes
# parse the received bytes
recv_objects = []
remaining_bytes = transmitted_bytes
while True:
if remaining_bytes < self.NUM_SIZE:
break
_msize = int.from_bytes(self.timeout_recv_buffer[: self.NUM_SIZE], "big")
self.timeout_recv_buffer = self.timeout_recv_buffer[self.NUM_SIZE:]
remaining_bytes -= self.NUM_SIZE
if remaining_bytes < _msize:
break
recv_objects.append(self.timeout_recv_buffer[:_msize])
self.timeout_recv_buffer = self.timeout_recv_buffer[_msize:]
remaining_bytes -= _msize
if remaining_bytes > 0:
self.timeout_recv_buffer = self.timeout_recv_buffer[remaining_bytes:]
if timeout > 0.0:
self.total_recved += transmitted_bytes + 2 * len(bytes_id)
print(info, f'recv with timeout Finally {time.time() - stime:.2f} transmitted {transmitted_bytes} {len(recv_objects)}')
return extra_msg, recv_objects, True
def send_iscomplete(self, count):
return True
def send(self, msg, add_head=True, info=''):
if add_head:
msize = len(msg)
msg = msize.to_bytes(self.NUM_SIZE, "big") + msg
sent = 0
total = len(msg)
while sent < total:
sent += self.sock.send(msg)
# if len(msg) < 200:
# try:
# print(info, 'socket send', pickle.loads(msg))
# except:
# try:
# print(info, 'socket send', pickle.loads(msg[self.NUM_SIZE:]))
# except:
# print(info, 'socket send', msg)
return sent
def special_send(self,msg,info=''):
self.send(int(0).to_bytes(self.BYTES_LEAST, "big")+msg)
def recv(self, info=''):
while len(self.recv_buffer) < self.NUM_SIZE:
self.recv_buffer += self.sock.recv(MAX_RECV_SIZE)
msize = int.from_bytes(self.recv_buffer[:self.NUM_SIZE], "big")
self.recv_buffer = self.recv_buffer[self.NUM_SIZE:]
while len(self.recv_buffer) < msize:
self.recv_buffer += self.sock.recv(MAX_RECV_SIZE)
msg = self.recv_buffer[:msize]
self.recv_buffer = self.recv_buffer[msize:]
self.total_recved += msize + self.NUM_SIZE
# if msize < 200:
# try:
# print(info, 'socket recv', msize, pickle.loads(msg))
# except:
# print(info, 'socket recv', msize, msg)
return msg
class row:
def __init__(self, idx,start_pos_total,start_pos_layer,length):
self.idx=idx
self.start_pos=start_pos_total
self.end_pos=start_pos_total+length
self.compress_start_pos=math.floor(self.start_pos/8.0)
self.compress_end_pos=math.floor((self.end_pos-1)/8.0)+1
self.layer_start_pos=start_pos_layer
self.layer_end_pos=start_pos_layer+length
def layer_unit(tensor,start_idx,start_pos):
rows=[]
if len(tensor.shape) == 1 or tensor.numel() < 1000:
rows.append(row(start_idx,start_pos,0,tensor.numel()))
return rows,start_idx+1,start_pos+tensor.numel()
else:
length=int(tensor.numel()/tensor.shape[0])
for i in range(tensor.shape[0]):
rows.append(row(start_idx+i,start_pos+i*length,i*length,length))
return rows,start_idx+tensor.shape[0],start_pos+tensor.numel()
class ROG_Parameter_Server:
def __init__(self, args, model, layer_info, communication_library, device,optimizer,compression_enable=True):
self.world_size = args.world_size -1
self.threshold = args.threshold
self.model = model
self.lock = threading.Lock()
self.training_step=[0 for _ in range(self.world_size)]
self.transmission_step=[0 for _ in range(self.world_size)]
self.stall_count = [0 for _ in range(self.world_size)]
self.stall_time = [AverageMeter() for _ in range(self.world_size)]
self.min_step = [mp.Queue(maxsize=1) for _ in range(self.world_size)]
self.communication_library=communication_library
self.device = device
self.COMPRESSION = compression_enable
if self.COMPRESSION:
assert self.communication_library == 'rog'
self.updated = True
self.recved = True
self.optimizer = optimizer
self.MTA_transmission_time_sum=0.0
self.MTA_transmission_time_count = 0
self.recent_transmission_time=np.array([0.0 for _ in range(30)])
self.rows_number=0
for i in range(len(layer_info)):
self.rows_number+=len(layer_info[i])
logging.info(f"rows number: {self.rows_number}")
self.MTA_threshold=math.ceil(MTA(self.threshold)*self.rows_number)-1
self.Gradient_Value_threshold=math.ceil(Gradient_Value*self.rows_number)-1
logging.info(f"COMPRESSION_enabled {compression_enable}")
sock = socket.socket(socket.AF_INET, socket.SOCK_STREAM)
sock.setsockopt(socket.SOL_SOCKET, socket.SO_REUSEADDR, 1)
# sock.setsockopt(socket.IPPROTO_TCP, socket.TCP_NODELAY, 1)
sock.bind((args.ps_ip, args.ps_port))
sock.listen(self.world_size)
self.chkpt_dir = args.chkpt_dir
self.layer_info=layer_info
self.row_index=[]
for i in range(len(layer_info)):
for j in range(len(layer_info[i])):
self.row_index.append((i,j))
self.model_numel=0
for p in self.model.parameters():
self.model_numel+=p.numel()
self.row_states=[np.array([0 for _ in range(self.world_size)]) for _ in range(self.rows_number)]
self.row_states_per_worker=[[np.array([0 for _ in range(self.world_size)]) for _ in range(self.rows_number)]for _ in range(self.world_size)]
self.temp_row_states_per_worker=[[np.array([0 for _ in range(self.world_size)]) for _ in range(self.rows_number)]for _ in range(self.world_size)]
self.row_importance=[[0.0 for _ in range(self.rows_number)] for _ in range(self.world_size)]
self.row_importance_idx=[[0 for _ in range(self.rows_number)] for _ in range(self.world_size)]
self._stop_event = threading.Event()
proc = []
t = threading.Thread(target=self.checkpoint_per_period, daemon=True)
proc.append(t)
self.sleep_time_lock = threading.Lock()
self.print_lock = threading.Lock()
self.must_update=[mp.Queue() for i in range(self.world_size)]
self.isupdate=[[mp.Queue() for i in range(self.world_size)] for _ in range(self.world_size)]
self.computation_compression = np.zeros([self.world_size, 3])
self.client_addresses = []
self.total_client_stream = []
for i in range(self.world_size):
client_sock, client_address = sock.accept()
client_stream = TCPMessageStream(client_sock)
self.total_client_stream.append(client_stream)
t = threading.Thread(target=self.each_parameter_server,args=(client_stream,client_address,i), daemon=True)
proc.append(t)
self.client_addresses.append(client_address[0])
logging.info(f'client address {self.client_addresses}')
timeout_sock = socket.socket(socket.AF_INET, socket.SOCK_STREAM)
timeout_sock.setsockopt(socket.SOL_SOCKET, socket.SO_REUSEADDR, 1)
# timeout_sock.setsockopt(socket.SOL_SOCKET, socket.SO_SNDBUF, 4096) # 4k
# timeout_sock.setsockopt(socket.IPPROTO_TCP, socket.TCP_NODELAY, 1) # no delay
timeout_sock.bind((args.ps_ip, args.ps_port + 11))
timeout_sock.listen(self.world_size)
for s in self.total_client_stream:
s.send(pickle.dumps('ok'))
client_timeout_sock, client_address = timeout_sock.accept()
idx = self.client_addresses.index(client_address[0])
client_timeout_sock.send(pickle.dumps(self.client_addresses[idx]))
self.total_client_stream[idx].set_timeoutsock(client_timeout_sock)
self.client_addresses[idx]='0.0.0.0'
for t in proc:
t.start()
logging.info("start parameter server")
for t in proc:
t.join()
sock.close()
def suggest_sleep_time(self, l, rank):
# first tune the batch size of the slow devices (small batchszie)
# to take a bit less time than fast devices (large batchsize) to finish computation and compression,
# then use this function to make the slow devices the sleep for certain time
# computation_compression: [[compute&compress time, sleep time, batchsize]]
self.sleep_time_lock.acquire()
arr = self.computation_compression
arr[rank] = np.array(l)
# if some workers have not sent its batchsize
if np.any(self.computation_compression[:, 2] <= 0.):
self.sleep_time_lock.release()
return
# largest batchsize
fast = arr.argmax(axis=0)[2]
# same batchsize can appear
all_fast = np.where(arr[:, 2] == arr[fast, 2])[0]
# find the one with largest compute&compress time
fast = all_fast[np.argmax(arr[:, 0][all_fast])]
if arr[fast, 0] < np.max(arr[:, 0]):
logging.info(f'Warning: slow devices are still taking longer time to compute and compress;\narray {arr}')
slowest = np.argmax(arr[:, 0])
arr[:, 1] = arr[slowest, 0] - arr[:, 0]
else:
arr[:, 1] = arr[fast, 0] - arr[:, 0]
self.sleep_time_lock.release()
def decide_row_importance_metric(self,rank,scales):
gradeint_value_important = [0 for _ in range(self.rows_number)]
gradient_values=[]
# tag=(self.threshold+1)*self.world_size
for i in range(len(self.layer_info)):
gradient_values.append(scales[0][i].item())
factor = max(gradient_values)+1
# iteration=self.training_step[rank]
for i in range(len(self.layer_info)):
gradient_value=gradient_values[i]/factor
for j in range(len(self.layer_info[i])):
idx=self.layer_info[i][j].idx
# tag1=iteration-min(self.row_states_per_worker[rank][idx])
# if tag1 >= self.threshold:
# self.row_importance[rank][idx] = float("inf")
# else:
tag2=sum(self.temp_row_states_per_worker[rank][idx]-self.row_states_per_worker[rank][idx])
# if tag2==0:
# freshness=0
# else:
freshness=tag2
self.row_importance[rank][idx]=freshness+gradient_value
gradeint_value_important[idx] = gradient_value
MTA_part_idx,_=zip(*sorted(enumerate(self.row_importance[rank]),key=itemgetter(1),reverse=True))
MTA_part_idx = list(MTA_part_idx[:self.MTA_threshold])
for idx in MTA_part_idx:
gradeint_value_important[idx]=-1
Gradient_Value_part_idx,_=zip(*sorted(enumerate(gradeint_value_important),key=itemgetter(1),reverse=True))
Gradient_Value_part_idx = list(Gradient_Value_part_idx[:-self.MTA_threshold])
self.row_importance_idx[rank] = MTA_part_idx + Gradient_Value_part_idx
def get_most_important_row(self,sign_model,rank):
poses = []
last_row_idx=self.row_importance_idx[rank][0]
start=last_row_idx
end=last_row_idx
idx=1
while idx< self.rows_number:
row_idx = self.row_importance_idx[rank][idx]
if row_idx != last_row_idx + 1:
poses.append((start,end))
start = row_idx
end = row_idx
last_row_idx = row_idx
idx += 1
poses.append((start,end))
count=0
whole_model=None
least_bytes = 0
compressed_idx = []
for i,pair in enumerate(poses):
length = pair[1]-pair[0] + 1
start_idx = pair[0]
pos=self.row_index[start_idx]
pos=self.layer_info[pos[0]][pos[1]]
start_pos=pos.compress_start_pos
end_idx = pair[1]
pos=self.row_index[end_idx]
pos=self.layer_info[pos[0]][pos[1]]
end_pos=pos.compress_end_pos
sign_row=sign_model['param'][start_pos:end_pos]
data=pickle.dumps(sign_row, protocol=4)
msize=len(data)
if whole_model == None:
whole_model = msize.to_bytes(TCP_NUM_SIZE,"big") + data
else:
whole_model += msize.to_bytes(TCP_NUM_SIZE,"big") + data
compressed_idx.append((count+length,len(whole_model)))
if count+length >= self.MTA_threshold + self.Gradient_Value_threshold and least_bytes == 0:
least_bytes = len(whole_model)
count += length
return whole_model, compressed_idx,least_bytes,poses
def update_transmission_time(self,transmission_time):
with self.lock:
self.recent_transmission_time[self.MTA_transmission_time_count%len(self.recent_transmission_time)]=transmission_time
self.MTA_transmission_time_sum+=transmission_time
self.MTA_transmission_time_count+=1
def decide_mta_transmission_time(self,rank):
with self.lock:
if 0 in self.transmission_step:
return 5
slowest_idx = np.argmin(self.transmission_step)
times_diff = self.transmission_step[rank] - self.transmission_step[slowest_idx]
if times_diff < 2:
return 0
else:
tag1 = np.max(self.recent_transmission_time)
tag2 = self.MTA_transmission_time_sum/self.MTA_transmission_time_count
return max(tag1, tag2)
# slowest_idx = np.argmin([self.transmission_step[i] for i in range(self.world_size)])
# fastest_idx = np.argmax([self.transmission_step[i] for i in range(self.world_size)])
# times_diff = self.transmission_step[rank] - self.transmission_step[slowest_idx]
# transmission_time_diff = self.MTA_transmission_time[rank].sum - self.MTA_transmission_time[slowest_idx].sum
# if times_diff == 0:
# if abs(transmission_time_diff) < self.MTA_transmission_time[slowest_idx].avg:
# # This worker is straggler itself
# if self.transmission_step[rank] < self.transmission_step[fastest_idx]:
# return 0
# # no straggler
# else:
# return self.MTA_transmission_time[slowest_idx].avg
# # this worker risks straggling
# elif transmission_time_diff > self.MTA_transmission_time[slowest_idx].avg:
# return 0
# else:
# return self.MTA_transmission_time[slowest_idx].avg * 2
# else:
# return self.MTA_transmission_time[slowest_idx].avg * 2**times_diff
def must_update_early_break(self,rank,client_stream: TCPMessageStream):
must_update = self.ask_for_new_rows(rank)
if must_update == []:
logging.info(f"{rank} really empty")
return
logging.info(f"{rank} must update early break, {len(must_update)}")
client_stream.special_send(zlib.compress(pickle.dumps(("must_update",must_update), protocol=4)))
param_group,recv_shape,sign_row=pickle.loads(client_stream.recv(rank))
recv_model=np.zeros(recv_shape,dtype=np.uint8)
version=self.training_step[rank]
count=0
start_idx=0
while start_idx < len(sign_row):
row_idx = must_update[count]
count += 1
self.row_states[row_idx][rank]=version
pos=self.row_index[row_idx]
pos=self.layer_info[pos[0]][pos[1]]
recv_model[pos.compress_start_pos:pos.compress_end_pos]=sign_row[start_idx:start_idx + pos.compress_end_pos- pos.compress_start_pos]
start_idx += pos.compress_end_pos- pos.compress_start_pos
logging.info(f"{rank} recv {count}")
data = {
'length': self.model_numel,
'param': recv_model
}
recv_model=deserialize(data)
sign_model=torch.zeros_like(recv_model)
rows_pos=self.get_pos(must_update)
for pos in rows_pos:
sign_model[pos[0]:pos[1]]=recv_model[pos[0]:pos[1]]
self.optimizer.recv(sign_model, param_group, rank,decompress_here=False)
for i in range(self.world_size):
if self.isupdate[rank][i].qsize()>0:
try:
self.isupdate[rank][i].get_nowait()
except queue.Empty:
pass
self.isupdate[rank][i].put("ok")
logging.info(f"{rank} early break complete")
def check_threshold(self,rank,client_stream: TCPMessageStream):
check_list=[]
waiting_for_new=[[] for _ in range(self.world_size)]
threshold=self.threshold
iteration=self.training_step[rank]
for i in range(self.rows_number):
for j in range(self.world_size):
if iteration>self.row_states[i][j]+threshold:
waiting_for_new[j].append(i)
for i in range(self.world_size):
if waiting_for_new[i]==[]:
continue
if self.isupdate[i][rank].qsize()>0:
try:
self.isupdate[i][rank].get_nowait()
except queue.Empty:
pass
logging.info(f"now must update {i} has size {self.must_update[i].qsize()}")
self.must_update[i].put((iteration,waiting_for_new[i]))
logging.info(f"{rank} put {len(waiting_for_new[i])} in {i} with iteration {iteration} and size now {self.must_update[i].qsize()}")
check_list.extend(waiting_for_new[i])
check_list=set(check_list)
stall_time=0.0
if check_list!=[]:
for idx_required in check_list:
now=min(self.row_states[idx_required])
while iteration > now + threshold:
for i in range(self.world_size):
while iteration>self.row_states[idx_required][i]+threshold:
logging.info(f"{rank} stalling on, {self.row_states[idx_required]},{i},{idx_required}")
logging.info(f"{rank} now must_update{rank} has size {self.must_update[rank].qsize()} and must_update{i} has size {self.must_update[i].qsize()}")
tag=time.time()
if self.must_update[rank].qsize()>0:
logging.info(f"{rank} is not empty and size {self.must_update[rank].qsize()} {self.must_update[rank].empty()}")
self.must_update_early_break(rank,client_stream)
else:
logging.info(f"{rank} is empty and size {self.must_update[rank].qsize()} {self.must_update[rank].empty()}")
self.isupdate[i][rank].get()
stall_time+=time.time()-tag
now=min(self.row_states[idx_required])
with self.print_lock:
logging.info(f"{rank} stall waiting {stall_time}")
self.stall_time[rank].update(stall_time)
with self.print_lock:
logging.info(f"{rank} threshold satisfy")
def ask_for_new_rows(self,rank):
threshold=self.threshold
must_update_rows=[]
while self.must_update[rank].qsize() >0:
logging.info(f"ask_for_new_rows: must update {rank} has size {self.must_update[rank].qsize()}")
iteration,waiting_for_new=self.must_update[rank].get()
logging.info(f"{rank} get {len(waiting_for_new)} {iteration}")
for idx in waiting_for_new:
if iteration<=self.row_states[idx][rank]+threshold:
continue
must_update_rows.append(idx)
logging.info(f"now must update size is {len(must_update_rows)} and queue size is {self.must_update[rank].qsize()} and is empty {self.must_update[rank].empty()}")
return sorted(set(must_update_rows))
def get_pos(self,recv_rows):
if recv_rows==[]:
return []
sorted_recv_rows=sorted(set(recv_rows))
poses=[]
if len(sorted_recv_rows) == self.rows_number:
poses.append((0,self.rows_number-1))
else:
last_row_idx=sorted_recv_rows[0]
start=last_row_idx
end=last_row_idx
idx=1
while idx<len(sorted_recv_rows):
row_idx = sorted_recv_rows[idx]
if row_idx != last_row_idx + 1:
poses.append((start,end))
start = row_idx
end = row_idx
last_row_idx = row_idx
idx += 1
poses.append((start,end))
row_pos=[]
for pair in poses:
pos=self.row_index[pair[0]]
pos=self.layer_info[pos[0]][pos[1]]
start_pos=pos.start_pos
pos=self.row_index[pair[1]]
pos=self.layer_info[pos[0]][pos[1]]
end_pos=pos.end_pos
row_pos.append((start_pos,end_pos))
return row_pos
def fix_unfinished(self,data,transmitted_bytes,compressed_idx,rank):
if transmitted_bytes == len(data):
return [i for i in range(self.rows_number)]
for i in range(len(compressed_idx)):
if compressed_idx[i][1] == transmitted_bytes:
at_least_idx = i
break
if compressed_idx[i][1] > transmitted_bytes:
at_least_idx = i-1
break
transmitted=[self.row_importance_idx[rank][i] for i in range(compressed_idx[at_least_idx][0])]
return sorted(transmitted)
def checkpoint_per_period(self, period=60, decay_step=20):
step = 1
start = time.time()
sleep_time = 0
while True:
if self._stop_event.is_set():
return
if sleep_time > 60:
time.sleep(60)
sleep_time -= 60
continue
elif sleep_time > 0:
time.sleep(sleep_time)
sleep_time = 0
if not self.recved:
time.sleep(5)
continue
else:
self.recved = False
if self.COMPRESSION:
self.optimizer.step()
torch.save(self.model.state_dict(), f'{self.chkpt_dir}/{time.time() - start:8.2f}-{max(self.training_step)}.chkpt')
sleep_time = period - (time.time() - start) % period
step += 1
if step % decay_step == 0:
period *= 3
def each_parameter_server(self, client_stream: TCPMessageStream, client_address, rank):
client_stream.send(pickle.dumps(rank), True, rank)
time.sleep(random.randint(1, 40)/10.)
client_stream.send_iscomplete(1)
while True:
msg = pickle.loads(client_stream.recv(rank))
logging.info(f"{rank} "+msg)
if self._stop_event.is_set():
msg = 'terminate'
if msg[:3]=='ask':
self.update_transmission_time(float(msg[3:]))
self.transmission_step[rank]+=1
tag=time.time()
self.check_threshold(rank,client_stream)
logging.info(f"{rank} ask step0 {time.time()-tag}")
self.temp_row_states_per_worker[rank] = self.row_states
sign_model, param_group = self.optimizer.send(rank,compress_here=True)
logging.info(f"{rank} ask step1 {time.time()-tag}")
self.decide_row_importance_metric(rank,param_group)
data, compressed_idx, least_bytes,poses=self.get_most_important_row(sign_model,rank)
logging.info(f"{rank} ask step2 {time.time()-tag}")
timeout = self.decide_mta_transmission_time(rank)
logging.info(f"{rank} timeout {timeout}")
transmission_start_time = time.time()
transmitted_bytes=client_stream.send_with_timeout(data, zlib.compress(pickle.dumps((param_group,sign_model["param"].shape,self.computation_compression[rank, 1],poses,timeout),protocol=4)),timeout, least_bytes=least_bytes, info=rank)
transmission_end_time = time.time()
self.update_transmission_time(transmission_end_time-transmission_start_time)
self.transmission_step[rank]+=1
logging.info(f"{rank} ask step3 transmission time {transmission_end_time-transmission_start_time} {time.time()-tag}")
transmitted=self.fix_unfinished(data,transmitted_bytes,compressed_idx,rank)
logging.info(f"{rank} ask step4 transmission rate {len(transmitted)/self.rows_number} {time.time()-tag}")
idx=0
for i,p in enumerate(self.model.parameters()):
for j in range(len(self.layer_info[i])):
if idx<len(transmitted) and self.layer_info[i][j].idx == transmitted[idx]:
start=self.layer_info[i][j].layer_start_pos
end=self.layer_info[i][j].layer_end_pos
p.error_per_worker[rank][start:end].copy_(p.temp_error_per_worker[rank][start:end])
p.grad_per_worker[rank][start:end].add_(p.temp_grad_per_worker[rank][start:end],alpha=-1.)
self.row_states_per_worker[rank][transmitted[idx]]=self.temp_row_states_per_worker[rank][transmitted[idx]]
idx+=1
logging.info(f"{rank} compress {compress_cost.avg:.2E}; decompress {decompress_cost.avg:.2E}; recv volume {client_stream.total_recved/1024./1024.:.2f}MB")
logging.info(f"IMPORTANT stall time avg:, {[round(t.avg,2) for t in self.stall_time]}, {round(sum([t.avg for t in self.stall_time])/len(self.stall_time),2)}, sum:, {[round(t.sum,2) for t in self.stall_time]}")
if msg=='send':
tag=time.time()
extra_msg, row_groups,succeed = client_stream.recv_with_timeout(info=rank)
logging.info(f"{rank} send step0 {time.time()-tag}")
param_group,recv_shape,computation_compression,poses=pickle.loads(zlib.decompress(extra_msg))
logging.info(f"{rank} send step1 {time.time()-tag}")
recv_model=np.zeros(recv_shape,dtype=np.uint8)
recv_rows=[]
rows_pos = []
version=self.training_step[rank] + 1
count=0
for group in row_groups: #pickle.dumps("ok")
data=pickle.loads(group)
sign_row=data
start_idx=0
while start_idx < len(sign_row):
row_idx_pairs = poses[count]
count += 1
for row_idx in range(row_idx_pairs[0],row_idx_pairs[1]+1):
self.row_states[row_idx][rank]=version
recv_rows.append(row_idx)
pos=self.row_index[row_idx_pairs[0]]
pos=self.layer_info[pos[0]][pos[1]]
start_pos=pos.compress_start_pos
start_decompress = pos.start_pos
pos=self.row_index[row_idx_pairs[1]]
pos=self.layer_info[pos[0]][pos[1]]
end_pos=pos.compress_end_pos
end_decompress = pos.end_pos
recv_model[start_pos:end_pos]=sign_row[start_idx:start_idx + end_pos- start_pos]
start_idx += end_pos- start_pos
rows_pos.append((start_decompress,end_decompress))
with self.print_lock:
logging.info(f"{rank} send step2 transmission rate {len(recv_rows)/self.rows_number} {time.time()-tag}")
# client_stream.send(pickle.dumps("ok"), True, rank)
data = {
'length': self.model_numel,
'param': recv_model
}
recv_model=deserialize(data)
sign_model=torch.zeros_like(recv_model)
for pos in rows_pos:
sign_model[pos[0]:pos[1]]=recv_model[pos[0]:pos[1]]
self.optimizer.recv(sign_model, param_group, rank,decompress_here=False)
for i in range(self.world_size):
if self.isupdate[rank][i].qsize()>0:
try:
self.isupdate[rank][i].get_nowait()
except queue.Empty:
pass
self.isupdate[rank][i].put("ok")
with self.lock:
logging.info(f"{rank} {self.training_step} before")
before = min(self.training_step)
self.training_step[rank] += 1
now = min(self.training_step)
logging.info(f"{rank} {self.training_step} after")
if self.training_step[rank] == 1:
for i in range(self.world_size):
self.isupdate[i][rank].get()
self.suggest_sleep_time(computation_compression, rank)
self.recved = True
# print(f'Fine Recv parameters from client {rank}')
client_stream.send_iscomplete(2)
if msg == "terminate":
if not self.COMPRESSION:
self.gathered_weight.put((None,None,None))
self._stop_event.set()
logging.info(f"server for {rank} terminated")
break
logging.info(f"{rank} complete")
class ROG_Local_Worker:
def __init__(self, args, model, layer_info,
communication_library, device, optimizer, compression_enable=True):
self.args = args
self.threshold = args.threshold
self.communication_library = communication_library
self.device = device
self.model = model
self.optimizer = optimizer
self.world_size=args.world_size-1
self.rows_number=0
for i in range(len(layer_info)):
self.rows_number+=len(layer_info[i])
logging.info(f"rows number: {self.rows_number}")
self.row_importance=[0. for _ in range(self.rows_number)]
self.row_importance_idx=[0 for _ in range(self.rows_number)]
self.row_index=[]
for i in range(len(layer_info)):
for j in range(len(layer_info[i])):
self.row_index.append((i,j))
self.model_numel=0
for p in self.model.parameters():
self.model_numel+=p.numel()
self.MTA_threshold=math.ceil(MTA(args.threshold)*self.rows_number)-1
self.Gradient_Value_threshold=math.ceil(Gradient_Value*self.rows_number)-1
self.max_MTA_transmission_time = 5.0
self.layer_info=layer_info
self.remain_number=[0 for _ in range(self.rows_number)]
self.COMPRESSION = compression_enable
self.t_communication = AverageMeter()
self.t_computation = AverageMeter()
self.batchsize = 0
self.sleep_time = 0.
self.lock = threading.Lock()
self.losses = AverageMeter()
if self.COMPRESSION:
assert self.communication_library == 'rog'
logging.info(f"Device {device}; cudnn.benchmark={torch.backends.cudnn.benchmark}; cudnn.enabled={torch.backends.cudnn.enabled}")
# Warm up phase
# self.train(0, 0, 0, 0.0001, local_update=args.E, warm_up=True, warm_up_iter=10)
# print('Warm up complete')
sock = socket.socket(socket.AF_INET, socket.SOCK_STREAM)
time.sleep(1) # waiting for ps start
sock.connect((args.ps_ip, args.ps_port))
# sock.setsockopt(socket.IPPROTO_TCP, socket.TCP_NODELAY, 1)
self.sock = TCPMessageStream(sock)
logging.info("conneted to parameter server")
assert pickle.loads(self.sock.recv()) == 'ok'
timeout_sock = socket.socket(socket.AF_INET, socket.SOCK_STREAM)
timeout_sock.connect((args.ps_ip, args.ps_port + 11))
# timeout_sock.setsockopt(socket.SOL_SOCKET, socket.SO_SNDBUF, 4096) # 4k
# timeout_sock.setsockopt(socket.IPPROTO_TCP, socket.TCP_NODELAY, 1) # no delay
logging.info(pickle.loads(timeout_sock.recv(MAX_RECV_SIZE)))
self.sock.set_timeoutsock(timeout_sock)
logging.info("Timeout sock connected.")
self.rank=pickle.loads(self.sock.recv())
logging.info(f"All workers ready, my rank is {self.rank}")
logging.info(self.optimizer.defaults)
self.gpu_running = AverageMeter()
self._stop_event = threading.Event()
self.checkpoint_thread = None
self.training_step = 0
logging.info('Worker started')
# print(datetime.datetime.now(), 'Worker started.')
self.recording=[AverageMeter() for _ in range(20)]
def decide_row_importance_metric(self,scales):
gradeint_value_important = [0 for _ in range(self.rows_number)]
gradient_values=[]
for i in range(len(self.layer_info)):
gradient_values.append(scales[0][i][0].item())
factor = max(gradient_values)+0.1
for i in range(len(self.layer_info)):
gradient_value=gradient_values[i]/factor
for j in range(len(self.layer_info[i])):
idx=self.layer_info[i][j].idx
freshness=self.remain_number[idx]
self.row_importance[idx]=freshness+gradient_value
gradeint_value_important[idx] = gradient_value
MTA_part_idx,_=zip(*sorted(enumerate(self.row_importance),key=itemgetter(1),reverse=True))
MTA_part_idx = list(MTA_part_idx[:self.MTA_threshold])
for idx in MTA_part_idx:
gradeint_value_important[idx]=-1
Gradient_Value_part_idx,_=zip(*sorted(enumerate(gradeint_value_important),key=itemgetter(1),reverse=True))
Gradient_Value_part_idx = list(Gradient_Value_part_idx[:-self.MTA_threshold])
self.row_importance_idx = MTA_part_idx + Gradient_Value_part_idx
# gradient_values=[]
# for i in range(len(self.layer_info)):
# gradient_values.append(scales[0][i][0].item())
# factor = max(gradient_values)+0.1
# for i in range(len(self.layer_info)):
# gradient_value=gradient_values[i]/factor
# for j in range(len(self.layer_info[i])):
# idx=self.layer_info[i][j].idx
# freshness=self.remain_number[idx]
# # if freshness >= self.threshold:
# # freshness=float("inf")
# self.row_importance[idx]=freshness+gradient_value
# for idx in must_update:
# self.row_importance[idx]=float("inf")
# self.row_importance_idx,_=zip(*sorted(enumerate(self.row_importance),key=itemgetter(1),reverse=True))
def set_adapt_noise(self,train_dl, criterion, mixup_fn):
self.train_loader = train_dl
self.criterion=criterion
self.mixup_fn=mixup_fn
self.lr_scheduler=MultiStepLR(self.optimizer, milestones=[800,1600,2400,3200], gamma=0.5)
def get_most_important_row(self,sign_model):
poses = []
last_row_idx=self.row_importance_idx[0]
start=last_row_idx
end=last_row_idx
idx=1
while idx< self.rows_number:
row_idx = self.row_importance_idx[idx]
if row_idx != last_row_idx + 1:
poses.append((start,end))
start = row_idx
end = row_idx
last_row_idx = row_idx
idx += 1
poses.append((start,end))
count=0
whole_model=None
least_bytes = 0
compressed_idx = []
for i,pair in enumerate(poses):
length = pair[1]-pair[0] + 1
start_idx = pair[0]
pos=self.row_index[start_idx]
pos=self.layer_info[pos[0]][pos[1]]
start_pos=pos.compress_start_pos
end_idx = pair[1]
pos=self.row_index[end_idx]
pos=self.layer_info[pos[0]][pos[1]]
end_pos=pos.compress_end_pos
sign_row=sign_model['param'][start_pos:end_pos]
data=pickle.dumps(sign_row, protocol=4)
msize=len(data)
if whole_model == None:
whole_model = msize.to_bytes(TCP_NUM_SIZE,"big") + data
else:
whole_model += msize.to_bytes(TCP_NUM_SIZE,"big") + data
compressed_idx.append((count+length,len(whole_model)))
if count+length >= self.MTA_threshold + self.Gradient_Value_threshold and least_bytes == 0:
least_bytes = len(whole_model)
count += length
return whole_model, compressed_idx,least_bytes,poses
def get_pos(self,recv_rows):
if recv_rows==[]:
return []
sorted_recv_rows=sorted(set(recv_rows))
poses=[]
if len(sorted_recv_rows) == self.rows_number:
poses.append((0,self.rows_number-1))
else:
last_row_idx=sorted_recv_rows[0]
start=last_row_idx
end=last_row_idx
idx=1
while idx<len(sorted_recv_rows):
row_idx = sorted_recv_rows[idx]
if row_idx != last_row_idx + 1:
poses.append((start,end))
start = row_idx
end = row_idx
last_row_idx = row_idx
idx += 1
poses.append((start,end))
row_pos=[]
for pair in poses: