diff --git a/containers/popv/context/main.py b/containers/popv/context/main.py index 746a648..9b2dcf7 100644 --- a/containers/popv/context/main.py +++ b/containers/popv/context/main.py @@ -144,7 +144,7 @@ def _find_in_dir( def normalize_var_names( self, data: scanpy.AnnData, options: PopvOptions - ) -> t.Tuple[scanpy.AnnData, pandas.Index]: + ) -> scanpy.AnnData: lookup = self.load_ensemble_lookup(options) names = data.var_names