From 4b93bf450a5f78fc81f8ab5ab3b5d85ca4fb0086 Mon Sep 17 00:00:00 2001
From: Stefan Verhoeven <stefan.verhoeven@gmail.com>
Date: Wed, 1 May 2024 13:26:41 +0200
Subject: [PATCH 01/11] Skip exit module + regen catalogs

Fixes #153
---
 .../generate_haddock3_catalog.py              |  6 +-
 .../public/catalog/haddock3.easy.yaml         | 87 +++++++++++-------
 .../public/catalog/haddock3.expert.yaml       | 91 ++++++++++++-------
 .../public/catalog/haddock3.guru.yaml         | 91 ++++++++++++-------
 4 files changed, 176 insertions(+), 99 deletions(-)

diff --git a/packages/haddock3_catalog/generate_haddock3_catalog.py b/packages/haddock3_catalog/generate_haddock3_catalog.py
index 404a248..f1ea0ab 100755
--- a/packages/haddock3_catalog/generate_haddock3_catalog.py
+++ b/packages/haddock3_catalog/generate_haddock3_catalog.py
@@ -430,11 +430,15 @@ def process_level(level_fn: Path, level: str):
 
     broken_modules = {
         'topocg', # Gives `AttributeError: module 'haddock.modules.topology.topocg' has no attribute 'HaddockModule'` error
+        'exit', # Does not make sense to have exit module in the catalog
     }
     # TODO define module order like category order
-    # now they are sorted alphabetically
+    # now they are sorted by insert
     nodes = [process_module(module, category, level) for module, category in sorted(modules_category.items()) if module not in broken_modules]
 
+    # remove catagories without nodes
+    categories = [c for c in categories if any(n['category'] == c['name'] for n in nodes)]
+
     catalog = {
         "title": f"Haddock 3 on {level} level",
         "categories": categories,
diff --git a/packages/haddock3_catalog/public/catalog/haddock3.easy.yaml b/packages/haddock3_catalog/public/catalog/haddock3.easy.yaml
index a2b1bcb..03def31 100644
--- a/packages/haddock3_catalog/public/catalog/haddock3.easy.yaml
+++ b/packages/haddock3_catalog/public/catalog/haddock3.easy.yaml
@@ -15,18 +15,6 @@ categories:
 - name: analysis
   description: HADDOCK3 modules related to model analysis.
   collapsed: false
-- name: extras
-  description: '
-
-    HADDOCK3 extra modules.
-
-
-    The extra modules are modules that do not belong to any of the standard
-
-    simulation categories but that help further configuring the workflow.
-
-    '
-  collapsed: true
 global:
   schema:
     type: object
@@ -460,6 +448,13 @@ nodes:
         type: number
         maximum: 1000
         minimum: 1
+      allatoms:
+        default: false
+        title: Atoms to be considered during the analysis.
+        description: Atoms to be considered during the analysis.
+        $comment: Atoms to be considered during the analysis. If false (default),
+          only backbone atoms will be considered, otherwise all the heavy-atoms.
+        type: boolean
     required: []
     additionalProperties: false
   uiSchema:
@@ -494,6 +489,8 @@ nodes:
       ui:group: analysis
     clt_threshold:
       ui:group: analysis
+    allatoms:
+      ui:group: analysis
   tomlSchema: {}
 - id: clustfcc
   category: analysis
@@ -898,25 +895,6 @@ nodes:
     elecflag:
       ui:group: force field
   tomlSchema: {}
-- id: exit
-  category: extras
-  label: Exit module
-  description: Stop the workflow when this module is reached.
-  schema:
-    type: object
-    properties:
-      message:
-        default: Stopping the workflow.
-        title: Exiting message.
-        description: The message to print when exiting.
-        $comment: The message to print when exiting.
-        type: string
-        minLength: 0
-        maxLength: 1000
-    required: []
-    additionalProperties: false
-  uiSchema: {}
-  tomlSchema: {}
 - id: flexref
   category: refinement
   label: Flexible refinement with CNS.
@@ -1055,6 +1033,8 @@ nodes:
       ui:group: other restraints
     elecflag:
       ui:group: force field
+    sinter_rigid_final:
+      ui:group: sampling
   tomlSchema:
     mol_shape:
       indexed: true
@@ -1073,6 +1053,7 @@ nodes:
   uiSchema:
     ambig_fname:
       ui:widget: file
+      ui:group: distance restraints
   tomlSchema: {}
 - id: ilrmsdmatrix
   category: analysis
@@ -1207,7 +1188,35 @@ nodes:
         type: boolean
     required: []
     additionalProperties: false
-  uiSchema: {}
+  uiSchema:
+    glowworms:
+      ui:group: sampling
+    steps:
+      ui:group: sampling
+    swarms:
+      ui:group: sampling
+    scoring:
+      ui:group: scoring
+    top:
+      ui:group: analysis
+    receptor_chains:
+      ui:group: restraints
+    receptor_active:
+      ui:group: restraints
+    receptor_passive:
+      ui:group: restraints
+    ligand_chains:
+      ui:group: restraints
+    ligand_active:
+      ui:group: restraints
+    ligand_passive:
+      ui:group: restraints
+    noxt:
+      ui:group: topology
+    noh:
+      ui:group: topology
+    restraints:
+      ui:group: distance restraints
   tomlSchema: {}
 - id: mdref
   category: refinement
@@ -1644,6 +1653,18 @@ nodes:
         type: number
         maximum: 99999
         minimum: 1
+      sortby:
+        default: score
+        title: Method used to define `best cluster`.
+        description: Best cluster can be defined based either on cluster models scores,
+          or on cluster size. By default, 'score' is selected.
+        $comment: if the selection is done by 'score' the average score of the top
+          (4) models of each cluster is used to define the cluster rank. When clustering
+          by 'size', a bigger cluster size corresponds to a higher rank. By default,
+          'score' is selected.
+        type: string
+        minLength: 2
+        maxLength: 15
     required: []
     additionalProperties: false
   uiSchema:
@@ -1651,6 +1672,8 @@ nodes:
       ui:group: analysis
     top_models:
       ui:group: analysis
+    sortby:
+      ui:group: analysis
   tomlSchema: {}
 - id: topoaa
   category: topology
diff --git a/packages/haddock3_catalog/public/catalog/haddock3.expert.yaml b/packages/haddock3_catalog/public/catalog/haddock3.expert.yaml
index 4c88449..64cfe5e 100644
--- a/packages/haddock3_catalog/public/catalog/haddock3.expert.yaml
+++ b/packages/haddock3_catalog/public/catalog/haddock3.expert.yaml
@@ -15,18 +15,6 @@ categories:
 - name: analysis
   description: HADDOCK3 modules related to model analysis.
   collapsed: false
-- name: extras
-  description: '
-
-    HADDOCK3 extra modules.
-
-
-    The extra modules are modules that do not belong to any of the standard
-
-    simulation categories but that help further configuring the workflow.
-
-    '
-  collapsed: true
 global:
   schema:
     type: object
@@ -498,6 +486,13 @@ nodes:
         type: number
         maximum: 1000
         minimum: 1
+      allatoms:
+        default: false
+        title: Atoms to be considered during the analysis.
+        description: Atoms to be considered during the analysis.
+        $comment: Atoms to be considered during the analysis. If false (default),
+          only backbone atoms will be considered, otherwise all the heavy-atoms.
+        type: boolean
     required: []
     additionalProperties: false
   uiSchema:
@@ -532,6 +527,8 @@ nodes:
       ui:group: analysis
     clt_threshold:
       ui:group: analysis
+    allatoms:
+      ui:group: analysis
   tomlSchema: {}
 - id: clustfcc
   category: analysis
@@ -817,7 +814,7 @@ nodes:
     generate_chordchart:
       ui:group: analysis
     topX:
-      ui:group: sample
+      ui:group: analysis
     cluster_heatmap_datatype:
       ui:group: analysis
     chordchart_datatype:
@@ -2973,25 +2970,6 @@ nodes:
     tolerance:
       ui:group: module
   tomlSchema: {}
-- id: exit
-  category: extras
-  label: Exit module
-  description: Stop the workflow when this module is reached.
-  schema:
-    type: object
-    properties:
-      message:
-        default: Stopping the workflow.
-        title: Exiting message.
-        description: The message to print when exiting.
-        $comment: The message to print when exiting.
-        type: string
-        minLength: 0
-        maxLength: 1000
-    required: []
-    additionalProperties: false
-  uiSchema: {}
-  tomlSchema: {}
 - id: flexref
   category: refinement
   label: Flexible refinement with CNS.
@@ -5113,6 +5091,8 @@ nodes:
       ui:group: sampling
     mdsteps_cool3:
       ui:group: sampling
+    sinter_rigid_final:
+      ui:group: sampling
     tolerance:
       ui:group: module
     nseg1:
@@ -5263,6 +5243,7 @@ nodes:
   uiSchema:
     ambig_fname:
       ui:widget: file
+      ui:group: distance restraints
   tomlSchema: {}
 - id: ilrmsdmatrix
   category: analysis
@@ -5397,7 +5378,35 @@ nodes:
         type: boolean
     required: []
     additionalProperties: false
-  uiSchema: {}
+  uiSchema:
+    glowworms:
+      ui:group: sampling
+    steps:
+      ui:group: sampling
+    swarms:
+      ui:group: sampling
+    scoring:
+      ui:group: scoring
+    top:
+      ui:group: analysis
+    receptor_chains:
+      ui:group: restraints
+    receptor_active:
+      ui:group: restraints
+    receptor_passive:
+      ui:group: restraints
+    ligand_chains:
+      ui:group: restraints
+    ligand_active:
+      ui:group: restraints
+    ligand_passive:
+      ui:group: restraints
+    noxt:
+      ui:group: topology
+    noh:
+      ui:group: topology
+    restraints:
+      ui:group: distance restraints
   tomlSchema: {}
 - id: mdref
   category: refinement
@@ -9288,6 +9297,18 @@ nodes:
         type: number
         maximum: 99999
         minimum: 1
+      sortby:
+        default: score
+        title: Method used to define `best cluster`.
+        description: Best cluster can be defined based either on cluster models scores,
+          or on cluster size. By default, 'score' is selected.
+        $comment: if the selection is done by 'score' the average score of the top
+          (4) models of each cluster is used to define the cluster rank. When clustering
+          by 'size', a bigger cluster size corresponds to a higher rank. By default,
+          'score' is selected.
+        type: string
+        minLength: 2
+        maxLength: 15
     required: []
     additionalProperties: false
   uiSchema:
@@ -9295,6 +9316,8 @@ nodes:
       ui:group: analysis
     top_models:
       ui:group: analysis
+    sortby:
+      ui:group: analysis
   tomlSchema: {}
 - id: topoaa
   category: topology
@@ -9434,6 +9457,8 @@ nodes:
     ligand_top_fname:
       ui:widget: file
       ui:group: force field
+    limit:
+      ui:group: sampling
     tolerance:
       ui:group: module
     mol:
diff --git a/packages/haddock3_catalog/public/catalog/haddock3.guru.yaml b/packages/haddock3_catalog/public/catalog/haddock3.guru.yaml
index f662e3a..0fe685b 100644
--- a/packages/haddock3_catalog/public/catalog/haddock3.guru.yaml
+++ b/packages/haddock3_catalog/public/catalog/haddock3.guru.yaml
@@ -15,18 +15,6 @@ categories:
 - name: analysis
   description: HADDOCK3 modules related to model analysis.
   collapsed: false
-- name: extras
-  description: '
-
-    HADDOCK3 extra modules.
-
-
-    The extra modules are modules that do not belong to any of the standard
-
-    simulation categories but that help further configuring the workflow.
-
-    '
-  collapsed: true
 global:
   schema:
     type: object
@@ -510,6 +498,13 @@ nodes:
         type: number
         maximum: 1000
         minimum: 1
+      allatoms:
+        default: false
+        title: Atoms to be considered during the analysis.
+        description: Atoms to be considered during the analysis.
+        $comment: Atoms to be considered during the analysis. If false (default),
+          only backbone atoms will be considered, otherwise all the heavy-atoms.
+        type: boolean
     required: []
     additionalProperties: false
   uiSchema:
@@ -544,6 +539,8 @@ nodes:
       ui:group: analysis
     clt_threshold:
       ui:group: analysis
+    allatoms:
+      ui:group: analysis
   tomlSchema: {}
 - id: clustfcc
   category: analysis
@@ -829,7 +826,7 @@ nodes:
     generate_chordchart:
       ui:group: analysis
     topX:
-      ui:group: sample
+      ui:group: analysis
     cluster_heatmap_datatype:
       ui:group: analysis
     chordchart_datatype:
@@ -3035,25 +3032,6 @@ nodes:
     log_level:
       ui:group: module
   tomlSchema: {}
-- id: exit
-  category: extras
-  label: Exit module
-  description: Stop the workflow when this module is reached.
-  schema:
-    type: object
-    properties:
-      message:
-        default: Stopping the workflow.
-        title: Exiting message.
-        description: The message to print when exiting.
-        $comment: The message to print when exiting.
-        type: string
-        minLength: 0
-        maxLength: 1000
-    required: []
-    additionalProperties: false
-  uiSchema: {}
-  tomlSchema: {}
 - id: flexref
   category: refinement
   label: Flexible refinement with CNS.
@@ -5383,6 +5361,8 @@ nodes:
       ui:group: sampling
     sinter_rigid_init:
       ui:group: sampling
+    sinter_rigid_final:
+      ui:group: sampling
     sinter_cool2_init:
       ui:group: sampling
     sinter_cool2_final:
@@ -5547,6 +5527,7 @@ nodes:
   uiSchema:
     ambig_fname:
       ui:widget: file
+      ui:group: distance restraints
   tomlSchema: {}
 - id: ilrmsdmatrix
   category: analysis
@@ -5694,7 +5675,35 @@ nodes:
         type: boolean
     required: []
     additionalProperties: false
-  uiSchema: {}
+  uiSchema:
+    glowworms:
+      ui:group: sampling
+    steps:
+      ui:group: sampling
+    swarms:
+      ui:group: sampling
+    scoring:
+      ui:group: scoring
+    top:
+      ui:group: analysis
+    receptor_chains:
+      ui:group: restraints
+    receptor_active:
+      ui:group: restraints
+    receptor_passive:
+      ui:group: restraints
+    ligand_chains:
+      ui:group: restraints
+    ligand_active:
+      ui:group: restraints
+    ligand_passive:
+      ui:group: restraints
+    noxt:
+      ui:group: topology
+    noh:
+      ui:group: topology
+    restraints:
+      ui:group: distance restraints
   tomlSchema: {}
 - id: mdref
   category: refinement
@@ -9716,6 +9725,18 @@ nodes:
         type: number
         maximum: 99999
         minimum: 1
+      sortby:
+        default: score
+        title: Method used to define `best cluster`.
+        description: Best cluster can be defined based either on cluster models scores,
+          or on cluster size. By default, 'score' is selected.
+        $comment: if the selection is done by 'score' the average score of the top
+          (4) models of each cluster is used to define the cluster rank. When clustering
+          by 'size', a bigger cluster size corresponds to a higher rank. By default,
+          'score' is selected.
+        type: string
+        minLength: 2
+        maxLength: 15
     required: []
     additionalProperties: false
   uiSchema:
@@ -9723,6 +9744,8 @@ nodes:
       ui:group: analysis
     top_models:
       ui:group: analysis
+    sortby:
+      ui:group: analysis
   tomlSchema: {}
 - id: topoaa
   category: topology
@@ -9888,6 +9911,8 @@ nodes:
     ligand_top_fname:
       ui:widget: file
       ui:group: force field
+    limit:
+      ui:group: sampling
     tolerance:
       ui:group: module
     mol:

From 515b2cb55e61fe57dc0be6b9e4d1b64561fe76c6 Mon Sep 17 00:00:00 2001
From: Stefan Verhoeven <stefan.verhoeven@gmail.com>
Date: Wed, 1 May 2024 14:05:36 +0200
Subject: [PATCH 02/11] Add test for group / name conflict

---
 packages/core/src/grouper.test.ts | 82 +++++++++++++++++++++++++++++++
 1 file changed, 82 insertions(+)

diff --git a/packages/core/src/grouper.test.ts b/packages/core/src/grouper.test.ts
index b608c75..0af8a23 100644
--- a/packages/core/src/grouper.test.ts
+++ b/packages/core/src/grouper.test.ts
@@ -504,6 +504,88 @@ describe('given a un-grouped prop with same name as group', () => {
   })
 })
 
+describe('given a prop in own group with same name as group of another prop', () => {
+  describe('groupSchema()', () => {
+    it('should make 2 groups each with a prop', () => {
+      const schema: JSONSchema7 = {
+        type: 'object',
+        properties: {
+          receptor_chains: {
+            type: 'string'
+          },
+          restraints: {
+            type: 'string'
+          }
+        },
+        additionalProperties: false
+      }
+      const uiSchema: UiSchema = {
+        receptor_chains: {
+          'ui:group': 'restraints'
+        },
+        restraints: {
+          'ui:group': 'distance restraints'
+        }
+      }
+      const groupedSchema = groupSchema(schema, uiSchema)
+
+      const expectedSchema: JSONSchema7 = {
+        type: 'object',
+        properties: {
+          restraints: {
+            type: 'object',
+            properties: {
+              receptor_chains: {
+                type: 'string'
+              }
+            },
+            additionalProperties: false
+          },
+          'distance restraints': {
+            type: 'object',
+            properties: {
+              restraints: {
+                type: 'string'
+              }
+            },
+            additionalProperties: false
+          }
+        },
+        additionalProperties: false
+      }
+      expect(groupedSchema).toEqual(expectedSchema)
+    })
+  })
+
+  describe('unGroupParameters()', () => {
+    it('should work', () => {
+      const groupedParameters = {
+        restraints: {
+          receptor_chains: 'val1'
+        },
+        'distance restraints': {
+          restraints: 'val2'
+        }
+      }
+
+      const actual = unGroupParameters(groupedParameters, {
+        receptor_chains: {
+          'ui:group': 'restraints'
+        },
+        restraints: {
+          'ui:group': 'distance restraints'
+        }
+      })
+
+      const expectedParameters = {
+        receptor_chains: 'val1',
+        restraints: 'val2'
+      }
+      expect(actual).toEqual(expectedParameters)
+    })
+  })
+})
+
 describe('given a prop with same name as group and another prop in same group', () => {
   describe('groupSchema()', () => {
     it('should move property inside object with same name', () => {

From 663a1ad81171c8292153c17b42853176484783bb Mon Sep 17 00:00:00 2001
From: Stefan Verhoeven <stefan.verhoeven@gmail.com>
Date: Fri, 3 May 2024 08:19:50 +0200
Subject: [PATCH 03/11] add todos

---
 packages/core/src/grouper.ts | 4 ++++
 1 file changed, 4 insertions(+)

diff --git a/packages/core/src/grouper.ts b/packages/core/src/grouper.ts
index 404b197..4563f49 100644
--- a/packages/core/src/grouper.ts
+++ b/packages/core/src/grouper.ts
@@ -37,6 +37,10 @@ export function groupSchema (
       .filter((v) => 'ui:group' in v)
       .map((v) => v['ui:group'])
   )
+  // TODO direct prop with same name as group throw error
+  // TODO prop with group and same name as any group should be nested first
+  // todos should replace lines 44-65
+
   const directProps = schema.properties ?? {}
   const directPropNamesWithSameNameAsGroup = new Set(
     Object.keys(directProps).filter((k) => definedGroups.has(k))

From 201d6d954354cc6438add95cfce27f99e3e2ef1b Mon Sep 17 00:00:00 2001
From: sverhoeven <s.verhoeven@esciencecenter.nl>
Date: Fri, 3 May 2024 10:52:14 +0200
Subject: [PATCH 04/11] Update vitest so vitest VS Code extension works

---
 packages/core/package.json |    2 +-
 packages/form/package.json |    2 +-
 vitest.workspace.ts        |    3 +
 yarn.lock                  | 1009 ++++++++++++++++++++++++++++++++----
 4 files changed, 927 insertions(+), 89 deletions(-)
 create mode 100644 vitest.workspace.ts

diff --git a/packages/core/package.json b/packages/core/package.json
index abcbb7d..1df314b 100644
--- a/packages/core/package.json
+++ b/packages/core/package.json
@@ -59,7 +59,7 @@
     "tsup": "^6.1.3",
     "typedoc": "^0.23.7",
     "vite": "^3.0.4",
-    "vitest": "^0.20.2"
+    "vitest": "1.5.3"
   },
   "dependencies": {
     "@dnd-kit/core": "^6.0.5",
diff --git a/packages/form/package.json b/packages/form/package.json
index f8b8eca..3c1fbe7 100644
--- a/packages/form/package.json
+++ b/packages/form/package.json
@@ -60,7 +60,7 @@
     "ts-standard": "^11.0.0",
     "tsup": "^6.1.3",
     "typedoc": "^0.23.7",
-    "vitest": "^0.20.2"
+    "vitest": "^1.5.3"
   },
   "tsup": {
     "entry": [
diff --git a/vitest.workspace.ts b/vitest.workspace.ts
new file mode 100644
index 0000000..c00c0cf
--- /dev/null
+++ b/vitest.workspace.ts
@@ -0,0 +1,3 @@
+export default [
+    'packages/*/vitest.config.ts'
+  ]
\ No newline at end of file
diff --git a/yarn.lock b/yarn.lock
index 04d6bc0..2ffe88c 100644
--- a/yarn.lock
+++ b/yarn.lock
@@ -1909,6 +1909,167 @@ __metadata:
   languageName: node
   linkType: hard
 
+"@esbuild/aix-ppc64@npm:0.20.2":
+  version: 0.20.2
+  resolution: "@esbuild/aix-ppc64@npm:0.20.2"
+  conditions: os=aix & cpu=ppc64
+  languageName: node
+  linkType: hard
+
+"@esbuild/android-arm64@npm:0.20.2":
+  version: 0.20.2
+  resolution: "@esbuild/android-arm64@npm:0.20.2"
+  conditions: os=android & cpu=arm64
+  languageName: node
+  linkType: hard
+
+"@esbuild/android-arm@npm:0.20.2":
+  version: 0.20.2
+  resolution: "@esbuild/android-arm@npm:0.20.2"
+  conditions: os=android & cpu=arm
+  languageName: node
+  linkType: hard
+
+"@esbuild/android-x64@npm:0.20.2":
+  version: 0.20.2
+  resolution: "@esbuild/android-x64@npm:0.20.2"
+  conditions: os=android & cpu=x64
+  languageName: node
+  linkType: hard
+
+"@esbuild/darwin-arm64@npm:0.20.2":
+  version: 0.20.2
+  resolution: "@esbuild/darwin-arm64@npm:0.20.2"
+  conditions: os=darwin & cpu=arm64
+  languageName: node
+  linkType: hard
+
+"@esbuild/darwin-x64@npm:0.20.2":
+  version: 0.20.2
+  resolution: "@esbuild/darwin-x64@npm:0.20.2"
+  conditions: os=darwin & cpu=x64
+  languageName: node
+  linkType: hard
+
+"@esbuild/freebsd-arm64@npm:0.20.2":
+  version: 0.20.2
+  resolution: "@esbuild/freebsd-arm64@npm:0.20.2"
+  conditions: os=freebsd & cpu=arm64
+  languageName: node
+  linkType: hard
+
+"@esbuild/freebsd-x64@npm:0.20.2":
+  version: 0.20.2
+  resolution: "@esbuild/freebsd-x64@npm:0.20.2"
+  conditions: os=freebsd & cpu=x64
+  languageName: node
+  linkType: hard
+
+"@esbuild/linux-arm64@npm:0.20.2":
+  version: 0.20.2
+  resolution: "@esbuild/linux-arm64@npm:0.20.2"
+  conditions: os=linux & cpu=arm64
+  languageName: node
+  linkType: hard
+
+"@esbuild/linux-arm@npm:0.20.2":
+  version: 0.20.2
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+  languageName: node
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+  resolution: "@esbuild/linux-s390x@npm:0.20.2"
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+  resolution: "@esbuild/linux-x64@npm:0.20.2"
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+  languageName: node
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+  resolution: "@esbuild/netbsd-x64@npm:0.20.2"
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+  linkType: hard
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+  resolution: "@esbuild/sunos-x64@npm:0.20.2"
+  conditions: os=sunos & cpu=x64
+  languageName: node
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+  resolution: "@esbuild/win32-arm64@npm:0.20.2"
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+  languageName: node
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+  resolution: "@esbuild/win32-ia32@npm:0.20.2"
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+  resolution: "@esbuild/win32-x64@npm:0.20.2"
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+  linkType: hard
+
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   resolution: "@eslint/eslintrc@npm:0.4.3"
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     typedoc: ^0.23.7
     vite: ^3.0.4
-    vitest: ^0.20.2
+    vitest: 1.5.3
     web-encoding: ^1.1.5
   peerDependencies:
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     tsup: ^6.1.3
     typedoc: ^0.23.7
-    vitest: ^0.20.2
+    vitest: ^1.5.3
   peerDependencies:
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     react-dom: ^17.0.0 || ^18.0.0
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+  resolution: "@jest/schemas@npm:29.6.3"
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   resolution: "@jridgewell/trace-mapping@npm:0.3.14"
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+  languageName: node
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+  resolution: "@rollup/rollup-darwin-x64@npm:4.17.2"
+  conditions: os=darwin & cpu=x64
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+  conditions: os=linux & cpu=arm & libc=musl
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+  resolution: "@rollup/rollup-linux-arm64-gnu@npm:4.17.2"
+  conditions: os=linux & cpu=arm64 & libc=glibc
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+  conditions: os=linux & cpu=arm64 & libc=musl
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+  languageName: node
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   resolution: "@storybook/addon-actions@npm:6.5.9"
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-  resolution: "@types/chai-subset@npm:1.3.3"
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@@ -3911,6 +4191,13 @@ __metadata:
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+  resolution: "@types/estree@npm:1.0.5"
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+  languageName: node
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+
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   resolution: "@types/estree@npm:0.0.51"
@@ -4399,6 +4686,60 @@ __metadata:
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+  resolution: "@vitest/expect@npm:1.5.3"
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+  languageName: node
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+  languageName: node
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+  languageName: node
+  linkType: hard
+
 "@webassemblyjs/ast@npm:1.11.1":
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   resolution: "@webassemblyjs/ast@npm:1.11.1"
@@ -4818,6 +5159,13 @@ __metadata:
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+  resolution: "acorn-walk@npm:8.3.2"
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+  languageName: node
+  linkType: hard
+
 "acorn@npm:^6.4.1":
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   resolution: "acorn@npm:6.4.2"
@@ -4836,6 +5184,15 @@ __metadata:
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   linkType: hard
 
+"acorn@npm:^8.11.3":
+  version: 8.11.3
+  resolution: "acorn@npm:8.11.3"
+  bin:
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+  languageName: node
+  linkType: hard
+
 "acorn@npm:^8.4.1, acorn@npm:^8.5.0, acorn@npm:^8.6.0, acorn@npm:^8.7.1":
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   resolution: "acorn@npm:8.7.1"
@@ -5926,6 +6283,13 @@ __metadata:
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+  resolution: "cac@npm:6.7.14"
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+  languageName: node
+  linkType: hard
+
 "cacache@npm:^12.0.2":
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   resolution: "cacache@npm:12.0.4"
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-  version: 4.3.6
-  resolution: "chai@npm:4.3.6"
+"chai@npm:^4.3.10":
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+  resolution: "chai@npm:4.4.1"
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-    check-error: ^1.0.2
-    deep-eql: ^3.0.1
-    get-func-name: ^2.0.0
-    loupe: ^2.3.1
+    check-error: ^1.0.3
+    deep-eql: ^4.1.3
+    get-func-name: ^2.0.2
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     pathval: ^1.1.1
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@@ -6547,6 +6913,13 @@ __metadata:
   languageName: node
   linkType: hard
 
+"confbox@npm:^0.1.7":
+  version: 0.1.7
+  resolution: "confbox@npm:0.1.7"
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+  languageName: node
+  linkType: hard
+
 "console-browserify@npm:^1.1.0":
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   resolution: "console-browserify@npm:1.2.0"
@@ -6975,12 +7348,12 @@ __metadata:
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-"deep-eql@npm:^3.0.1":
-  version: 3.0.1
-  resolution: "deep-eql@npm:3.0.1"
+"deep-eql@npm:^4.1.3":
+  version: 4.1.3
+  resolution: "deep-eql@npm:4.1.3"
   dependencies:
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@@ -7139,6 +7512,13 @@ __metadata:
   languageName: node
   linkType: hard
 
+"diff-sequences@npm:^29.6.3":
+  version: 29.6.3
+  resolution: "diff-sequences@npm:29.6.3"
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+  languageName: node
+  linkType: hard
+
 "diffie-hellman@npm:^5.0.0":
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   resolution: "diffie-hellman@npm:5.0.3"
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+  version: 0.20.2
+  resolution: "esbuild@npm:0.20.2"
+  dependencies:
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+    "@esbuild/darwin-x64": 0.20.2
+    "@esbuild/freebsd-arm64": 0.20.2
+    "@esbuild/freebsd-x64": 0.20.2
+    "@esbuild/linux-arm": 0.20.2
+    "@esbuild/linux-arm64": 0.20.2
+    "@esbuild/linux-ia32": 0.20.2
+    "@esbuild/linux-loong64": 0.20.2
+    "@esbuild/linux-mips64el": 0.20.2
+    "@esbuild/linux-ppc64": 0.20.2
+    "@esbuild/linux-riscv64": 0.20.2
+    "@esbuild/linux-s390x": 0.20.2
+    "@esbuild/linux-x64": 0.20.2
+    "@esbuild/netbsd-x64": 0.20.2
+    "@esbuild/openbsd-x64": 0.20.2
+    "@esbuild/sunos-x64": 0.20.2
+    "@esbuild/win32-arm64": 0.20.2
+    "@esbuild/win32-ia32": 0.20.2
+    "@esbuild/win32-x64": 0.20.2
+  dependenciesMeta:
+    "@esbuild/aix-ppc64":
+      optional: true
+    "@esbuild/android-arm":
+      optional: true
+    "@esbuild/android-arm64":
+      optional: true
+    "@esbuild/android-x64":
+      optional: true
+    "@esbuild/darwin-arm64":
+      optional: true
+    "@esbuild/darwin-x64":
+      optional: true
+    "@esbuild/freebsd-arm64":
+      optional: true
+    "@esbuild/freebsd-x64":
+      optional: true
+    "@esbuild/linux-arm":
+      optional: true
+    "@esbuild/linux-arm64":
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+    "@esbuild/linux-ia32":
+      optional: true
+    "@esbuild/linux-loong64":
+      optional: true
+    "@esbuild/linux-mips64el":
+      optional: true
+    "@esbuild/linux-ppc64":
+      optional: true
+    "@esbuild/linux-riscv64":
+      optional: true
+    "@esbuild/linux-s390x":
+      optional: true
+    "@esbuild/linux-x64":
+      optional: true
+    "@esbuild/netbsd-x64":
+      optional: true
+    "@esbuild/openbsd-x64":
+      optional: true
+    "@esbuild/sunos-x64":
+      optional: true
+    "@esbuild/win32-arm64":
+      optional: true
+    "@esbuild/win32-ia32":
+      optional: true
+    "@esbuild/win32-x64":
+      optional: true
+  bin:
+    esbuild: bin/esbuild
+  checksum: bc88050fc1ca5c1bd03648f9979e514bdefb956a63aa3974373bb7b9cbac0b3aac9b9da1b5bdca0b3490e39d6b451c72815dbd6b7d7f978c91fbe9c9e9aa4e4c
+  languageName: node
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+
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   resolution: "escalade@npm:3.1.1"
@@ -8253,6 +8713,15 @@ __metadata:
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+"estree-walker@npm:^3.0.3":
+  version: 3.0.3
+  resolution: "estree-walker@npm:3.0.3"
+  dependencies:
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+  languageName: node
+  linkType: hard
+
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   resolution: "esutils@npm:2.0.3"
@@ -8324,6 +8793,23 @@ __metadata:
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+"execa@npm:^8.0.1":
+  version: 8.0.1
+  resolution: "execa@npm:8.0.1"
+  dependencies:
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+    get-stream: ^8.0.1
+    human-signals: ^5.0.0
+    is-stream: ^3.0.0
+    merge-stream: ^2.0.0
+    npm-run-path: ^5.1.0
+    onetime: ^6.0.0
+    signal-exit: ^4.1.0
+    strip-final-newline: ^3.0.0
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+  languageName: node
+  linkType: hard
+
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   resolution: "expand-brackets@npm:2.1.4"
@@ -8923,6 +9409,16 @@ __metadata:
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+"fsevents@npm:~2.3.3":
+  version: 2.3.3
+  resolution: "fsevents@npm:2.3.3"
+  dependencies:
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+  checksum: 11e6ea6fea15e42461fc55b4b0e4a0a3c654faa567f1877dbd353f39156f69def97a69936d1746619d656c4b93de2238bf731f6085a03a50cabf287c9d024317
+  conditions: os=darwin
+  languageName: node
+  linkType: hard
+
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   resolution: "fsevents@patch:fsevents@npm%3A1.2.13#~builtin<compat/fsevents>::version=1.2.13&hash=18f3a7"
@@ -8942,6 +9438,15 @@ __metadata:
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+"fsevents@patch:fsevents@~2.3.3#~builtin<compat/fsevents>":
+  version: 2.3.3
+  resolution: "fsevents@patch:fsevents@npm%3A2.3.3#~builtin<compat/fsevents>::version=2.3.3&hash=18f3a7"
+  dependencies:
+    node-gyp: latest
+  conditions: os=darwin
+  languageName: node
+  linkType: hard
+
 "function-bind@npm:^1.1.1":
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   resolution: "function-bind@npm:1.1.1"
@@ -9022,10 +9527,10 @@ __metadata:
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-"get-func-name@npm:^2.0.0":
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-  resolution: "get-func-name@npm:2.0.0"
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+"get-func-name@npm:^2.0.1, get-func-name@npm:^2.0.2":
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+  resolution: "get-func-name@npm:2.0.2"
+  checksum: 3f62f4c23647de9d46e6f76d2b3eafe58933a9b3830c60669e4180d6c601ce1b4aa310ba8366143f55e52b139f992087a9f0647274e8745621fa2af7e0acf13b
   languageName: node
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@@ -9077,6 +9582,13 @@ __metadata:
   languageName: node
   linkType: hard
 
+"get-stream@npm:^8.0.1":
+  version: 8.0.1
+  resolution: "get-stream@npm:8.0.1"
+  checksum: 01e3d3cf29e1393f05f44d2f00445c5f9ec3d1c49e8179b31795484b9c117f4c695e5e07b88b50785d5c8248a788c85d9913a79266fc77e3ef11f78f10f1b974
+  languageName: node
+  linkType: hard
+
 "get-symbol-description@npm:^1.0.0":
   version: 1.0.0
   resolution: "get-symbol-description@npm:1.0.0"
@@ -9709,6 +10221,13 @@ __metadata:
   languageName: node
   linkType: hard
 
+"human-signals@npm:^5.0.0":
+  version: 5.0.0
+  resolution: "human-signals@npm:5.0.0"
+  checksum: 6504560d5ed91444f16bea3bd9dfc66110a339442084e56c3e7fa7bbdf3f406426d6563d662bdce67064b165eac31eeabfc0857ed170aaa612cf14ec9f9a464c
+  languageName: node
+  linkType: hard
+
 "humanize-ms@npm:^1.2.1":
   version: 1.2.1
   resolution: "humanize-ms@npm:1.2.1"
@@ -10321,6 +10840,13 @@ __metadata:
   languageName: node
   linkType: hard
 
+"is-stream@npm:^3.0.0":
+  version: 3.0.0
+  resolution: "is-stream@npm:3.0.0"
+  checksum: 172093fe99119ffd07611ab6d1bcccfe8bc4aa80d864b15f43e63e54b7abc71e779acd69afdb854c4e2a67fdc16ae710e370eda40088d1cfc956a50ed82d8f16
+  languageName: node
+  linkType: hard
+
 "is-string@npm:^1.0.5, is-string@npm:^1.0.7":
   version: 1.0.7
   resolution: "is-string@npm:1.0.7"
@@ -10647,6 +11173,13 @@ __metadata:
   languageName: node
   linkType: hard
 
+"js-tokens@npm:^9.0.0":
+  version: 9.0.0
+  resolution: "js-tokens@npm:9.0.0"
+  checksum: 427d0db681caab0c906cfc78a0235bbe7b41712cee83f3f14785c1de079a1b1a85693cc8f99a3f71685d0d76acaa5b9c8920850b67f93d3eeb7ef186987d186c
+  languageName: node
+  linkType: hard
+
 "js-yaml@npm:^3.13.1":
   version: 3.14.1
   resolution: "js-yaml@npm:3.14.1"
@@ -11016,10 +11549,13 @@ __metadata:
   languageName: node
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-"local-pkg@npm:^0.4.2":
-  version: 0.4.2
-  resolution: "local-pkg@npm:0.4.2"
-  checksum: 22be451353c25c4411b552bf01880ebc9e995b93574b2facc7757968d888356df59199cacada14162ab53bbc9da055bb692c907b4171f008dbce45a2afc777c1
+"local-pkg@npm:^0.5.0":
+  version: 0.5.0
+  resolution: "local-pkg@npm:0.5.0"
+  dependencies:
+    mlly: ^1.4.2
+    pkg-types: ^1.0.3
+  checksum: b0a6931e588ad4f7bf4ab49faacf49e07fc4d05030f895aa055d46727a15b99300d39491cf2c3e3f05284aec65565fb760debb74c32e64109f4a101f9300d81a
   languageName: node
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@@ -11197,12 +11733,12 @@ __metadata:
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-"loupe@npm:^2.3.1":
-  version: 2.3.4
-  resolution: "loupe@npm:2.3.4"
+"loupe@npm:^2.3.6, loupe@npm:^2.3.7":
+  version: 2.3.7
+  resolution: "loupe@npm:2.3.7"
   dependencies:
-    get-func-name: ^2.0.0
-  checksum: 5af91db61aa18530f1749a64735ee194ac263e65e9f4d1562bf3036c591f1baa948289c193e0e34c7b5e2c1b75d3c1dc4fce87f5edb3cee10b0c0df46bc9ffb3
+    get-func-name: ^2.0.1
+  checksum: 96c058ec7167598e238bb7fb9def2f9339215e97d6685d9c1e3e4bdb33d14600e11fe7a812cf0c003dfb73ca2df374f146280b2287cae9e8d989e9d7a69a203b
   languageName: node
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@@ -11275,6 +11811,15 @@ __metadata:
   languageName: node
   linkType: hard
 
+"magic-string@npm:^0.30.5":
+  version: 0.30.10
+  resolution: "magic-string@npm:0.30.10"
+  dependencies:
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+  checksum: 456fd47c39b296c47dff967e1965121ace35417eab7f45a99e681e725b8661b48e1573c366ee67a27715025b3740773c46b088f115421c7365ea4ea6fa10d399
+  languageName: node
+  linkType: hard
+
 "make-dir@npm:^2.0.0, make-dir@npm:^2.1.0":
   version: 2.1.0
   resolution: "make-dir@npm:2.1.0"
@@ -11614,6 +12159,13 @@ __metadata:
   languageName: node
   linkType: hard
 
+"mimic-fn@npm:^4.0.0":
+  version: 4.0.0
+  resolution: "mimic-fn@npm:4.0.0"
+  checksum: 995dcece15ee29aa16e188de6633d43a3db4611bcf93620e7e62109ec41c79c0f34277165b8ce5e361205049766e371851264c21ac64ca35499acb5421c2ba56
+  languageName: node
+  linkType: hard
+
 "min-document@npm:^2.19.0":
   version: 2.19.0
   resolution: "min-document@npm:2.19.0"
@@ -11787,6 +12339,18 @@ __metadata:
   languageName: node
   linkType: hard
 
+"mlly@npm:^1.4.2, mlly@npm:^1.6.1":
+  version: 1.7.0
+  resolution: "mlly@npm:1.7.0"
+  dependencies:
+    acorn: ^8.11.3
+    pathe: ^1.1.2
+    pkg-types: ^1.1.0
+    ufo: ^1.5.3
+  checksum: c1548f4dd0e31ce15d293ebb7c61778bd28c405573dc43dcf799eaeb8f6b776d7dadd95e957d6631b9cc4bb963cd01079d58b7e2290ed540aa460e061bdbd1fa
+  languageName: node
+  linkType: hard
+
 "move-concurrently@npm:^1.0.1":
   version: 1.0.1
   resolution: "move-concurrently@npm:1.0.1"
@@ -11858,6 +12422,15 @@ __metadata:
   languageName: node
   linkType: hard
 
+"nanoid@npm:^3.3.7":
+  version: 3.3.7
+  resolution: "nanoid@npm:3.3.7"
+  bin:
+    nanoid: bin/nanoid.cjs
+  checksum: d36c427e530713e4ac6567d488b489a36582ef89da1d6d4e3b87eded11eb10d7042a877958c6f104929809b2ab0bafa17652b076cdf84324aa75b30b722204f2
+  languageName: node
+  linkType: hard
+
 "nanoid@npm:^4.0.0":
   version: 4.0.0
   resolution: "nanoid@npm:4.0.0"
@@ -12083,6 +12656,15 @@ __metadata:
   languageName: node
   linkType: hard
 
+"npm-run-path@npm:^5.1.0":
+  version: 5.3.0
+  resolution: "npm-run-path@npm:5.3.0"
+  dependencies:
+    path-key: ^4.0.0
+  checksum: ae8e7a89da9594fb9c308f6555c73f618152340dcaae423e5fb3620026fefbec463618a8b761920382d666fa7a2d8d240b6fe320e8a6cdd54dc3687e2b659d25
+  languageName: node
+  linkType: hard
+
 "npmlog@npm:^5.0.1":
   version: 5.0.1
   resolution: "npmlog@npm:5.0.1"
@@ -12288,6 +12870,15 @@ __metadata:
   languageName: node
   linkType: hard
 
+"onetime@npm:^6.0.0":
+  version: 6.0.0
+  resolution: "onetime@npm:6.0.0"
+  dependencies:
+    mimic-fn: ^4.0.0
+  checksum: 0846ce78e440841335d4e9182ef69d5762e9f38aa7499b19f42ea1c4cd40f0b4446094c455c713f9adac3f4ae86f613bb5e30c99e52652764d06a89f709b3788
+  languageName: node
+  linkType: hard
+
 "open@npm:^7.0.3":
   version: 7.4.2
   resolution: "open@npm:7.4.2"
@@ -12412,6 +13003,15 @@ __metadata:
   languageName: node
   linkType: hard
 
+"p-limit@npm:^5.0.0":
+  version: 5.0.0
+  resolution: "p-limit@npm:5.0.0"
+  dependencies:
+    yocto-queue: ^1.0.0
+  checksum: 87bf5837dee6942f0dbeff318436179931d9a97848d1b07dbd86140a477a5d2e6b90d9701b210b4e21fe7beaea2979dfde366e4f576fa644a59bd4d6a6371da7
+  languageName: node
+  linkType: hard
+
 "p-locate@npm:^2.0.0":
   version: 2.0.0
   resolution: "p-locate@npm:2.0.0"
@@ -12696,6 +13296,13 @@ __metadata:
   languageName: node
   linkType: hard
 
+"path-key@npm:^4.0.0":
+  version: 4.0.0
+  resolution: "path-key@npm:4.0.0"
+  checksum: 8e6c314ae6d16b83e93032c61020129f6f4484590a777eed709c4a01b50e498822b00f76ceaf94bc64dbd90b327df56ceadce27da3d83393790f1219e07721d7
+  languageName: node
+  linkType: hard
+
 "path-parse@npm:^1.0.7":
   version: 1.0.7
   resolution: "path-parse@npm:1.0.7"
@@ -12737,6 +13344,13 @@ __metadata:
   languageName: node
   linkType: hard
 
+"pathe@npm:^1.1.1, pathe@npm:^1.1.2":
+  version: 1.1.2
+  resolution: "pathe@npm:1.1.2"
+  checksum: ec5f778d9790e7b9ffc3e4c1df39a5bb1ce94657a4e3ad830c1276491ca9d79f189f47609884671db173400256b005f4955f7952f52a2aeb5834ad5fb4faf134
+  languageName: node
+  linkType: hard
+
 "pathval@npm:^1.1.1":
   version: 1.1.1
   resolution: "pathval@npm:1.1.1"
@@ -12859,6 +13473,17 @@ __metadata:
   languageName: node
   linkType: hard
 
+"pkg-types@npm:^1.0.3, pkg-types@npm:^1.1.0":
+  version: 1.1.0
+  resolution: "pkg-types@npm:1.1.0"
+  dependencies:
+    confbox: ^0.1.7
+    mlly: ^1.6.1
+    pathe: ^1.1.2
+  checksum: 9cd3684e308c622db79efc8edc9291662e01cb42ed624ea2fa5400fb6eab94679b4e5b28808e9b763298a023c2381fd72a363a1c84a9073c96609af4c5c59f8f
+  languageName: node
+  linkType: hard
+
 "playwright-core@npm:1.23.2":
   version: 1.23.2
   resolution: "playwright-core@npm:1.23.2"
@@ -13015,6 +13640,17 @@ __metadata:
   languageName: node
   linkType: hard
 
+"postcss@npm:^8.4.38":
+  version: 8.4.38
+  resolution: "postcss@npm:8.4.38"
+  dependencies:
+    nanoid: ^3.3.7
+    picocolors: ^1.0.0
+    source-map-js: ^1.2.0
+  checksum: 649f9e60a763ca4b5a7bbec446a069edf07f057f6d780a5a0070576b841538d1ecf7dd888f2fbfd1f76200e26c969e405aeeae66332e6927dbdc8bdcb90b9451
+  languageName: node
+  linkType: hard
+
 "prelude-ls@npm:^1.2.1":
   version: 1.2.1
   resolution: "prelude-ls@npm:1.2.1"
@@ -13059,6 +13695,17 @@ __metadata:
   languageName: node
   linkType: hard
 
+"pretty-format@npm:^29.7.0":
+  version: 29.7.0
+  resolution: "pretty-format@npm:29.7.0"
+  dependencies:
+    "@jest/schemas": ^29.6.3
+    ansi-styles: ^5.0.0
+    react-is: ^18.0.0
+  checksum: 032c1602383e71e9c0c02a01bbd25d6759d60e9c7cf21937dde8357aa753da348fcec5def5d1002c9678a8524d5fe099ad98861286550ef44de8808cc61e43b6
+  languageName: node
+  linkType: hard
+
 "pretty-hrtime@npm:^1.0.3":
   version: 1.0.3
   resolution: "pretty-hrtime@npm:1.0.3"
@@ -13564,6 +14211,13 @@ __metadata:
   languageName: node
   linkType: hard
 
+"react-is@npm:^18.0.0":
+  version: 18.3.1
+  resolution: "react-is@npm:18.3.1"
+  checksum: e20fe84c86ff172fc8d898251b7cc2c43645d108bf96d0b8edf39b98f9a2cae97b40520ee7ed8ee0085ccc94736c4886294456033304151c3f94978cec03df21
+  languageName: node
+  linkType: hard
+
 "react-lifecycles-compat@npm:^3.0.4":
   version: 3.0.4
   resolution: "react-lifecycles-compat@npm:3.0.4"
@@ -14196,6 +14850,69 @@ __metadata:
   languageName: node
   linkType: hard
 
+"rollup@npm:^4.13.0":
+  version: 4.17.2
+  resolution: "rollup@npm:4.17.2"
+  dependencies:
+    "@rollup/rollup-android-arm-eabi": 4.17.2
+    "@rollup/rollup-android-arm64": 4.17.2
+    "@rollup/rollup-darwin-arm64": 4.17.2
+    "@rollup/rollup-darwin-x64": 4.17.2
+    "@rollup/rollup-linux-arm-gnueabihf": 4.17.2
+    "@rollup/rollup-linux-arm-musleabihf": 4.17.2
+    "@rollup/rollup-linux-arm64-gnu": 4.17.2
+    "@rollup/rollup-linux-arm64-musl": 4.17.2
+    "@rollup/rollup-linux-powerpc64le-gnu": 4.17.2
+    "@rollup/rollup-linux-riscv64-gnu": 4.17.2
+    "@rollup/rollup-linux-s390x-gnu": 4.17.2
+    "@rollup/rollup-linux-x64-gnu": 4.17.2
+    "@rollup/rollup-linux-x64-musl": 4.17.2
+    "@rollup/rollup-win32-arm64-msvc": 4.17.2
+    "@rollup/rollup-win32-ia32-msvc": 4.17.2
+    "@rollup/rollup-win32-x64-msvc": 4.17.2
+    "@types/estree": 1.0.5
+    fsevents: ~2.3.2
+  dependenciesMeta:
+    "@rollup/rollup-android-arm-eabi":
+      optional: true
+    "@rollup/rollup-android-arm64":
+      optional: true
+    "@rollup/rollup-darwin-arm64":
+      optional: true
+    "@rollup/rollup-darwin-x64":
+      optional: true
+    "@rollup/rollup-linux-arm-gnueabihf":
+      optional: true
+    "@rollup/rollup-linux-arm-musleabihf":
+      optional: true
+    "@rollup/rollup-linux-arm64-gnu":
+      optional: true
+    "@rollup/rollup-linux-arm64-musl":
+      optional: true
+    "@rollup/rollup-linux-powerpc64le-gnu":
+      optional: true
+    "@rollup/rollup-linux-riscv64-gnu":
+      optional: true
+    "@rollup/rollup-linux-s390x-gnu":
+      optional: true
+    "@rollup/rollup-linux-x64-gnu":
+      optional: true
+    "@rollup/rollup-linux-x64-musl":
+      optional: true
+    "@rollup/rollup-win32-arm64-msvc":
+      optional: true
+    "@rollup/rollup-win32-ia32-msvc":
+      optional: true
+    "@rollup/rollup-win32-x64-msvc":
+      optional: true
+    fsevents:
+      optional: true
+  bin:
+    rollup: dist/bin/rollup
+  checksum: e6a2813fea25ea816ce582a04c2ffccc0b841ddc22842325c39353620214055bf827e0d7f6714e836170079faf0443ffc27966ccae27900ae3baa039aa36a8e1
+  languageName: node
+  linkType: hard
+
 "rsvp@npm:^4.8.4":
   version: 4.8.5
   resolution: "rsvp@npm:4.8.5"
@@ -14559,6 +15276,13 @@ __metadata:
   languageName: node
   linkType: hard
 
+"siginfo@npm:^2.0.0":
+  version: 2.0.0
+  resolution: "siginfo@npm:2.0.0"
+  checksum: 8aa5a98640ca09fe00d74416eca97551b3e42991614a3d1b824b115fc1401543650914f651ab1311518177e4d297e80b953f4cd4cd7ea1eabe824e8f2091de01
+  languageName: node
+  linkType: hard
+
 "signal-exit@npm:^3.0.0, signal-exit@npm:^3.0.2, signal-exit@npm:^3.0.3, signal-exit@npm:^3.0.7":
   version: 3.0.7
   resolution: "signal-exit@npm:3.0.7"
@@ -14566,6 +15290,13 @@ __metadata:
   languageName: node
   linkType: hard
 
+"signal-exit@npm:^4.1.0":
+  version: 4.1.0
+  resolution: "signal-exit@npm:4.1.0"
+  checksum: 64c757b498cb8629ffa5f75485340594d2f8189e9b08700e69199069c8e3070fb3e255f7ab873c05dc0b3cec412aea7402e10a5990cb6a050bd33ba062a6c549
+  languageName: node
+  linkType: hard
+
 "sisteransi@npm:^1.0.5":
   version: 1.0.5
   resolution: "sisteransi@npm:1.0.5"
@@ -14676,6 +15407,13 @@ __metadata:
   languageName: node
   linkType: hard
 
+"source-map-js@npm:^1.2.0":
+  version: 1.2.0
+  resolution: "source-map-js@npm:1.2.0"
+  checksum: 791a43306d9223792e84293b00458bf102a8946e7188f3db0e4e22d8d530b5f80a4ce468eb5ec0bf585443ad55ebbd630bf379c98db0b1f317fd902500217f97
+  languageName: node
+  linkType: hard
+
 "source-map-resolve@npm:^0.5.0":
   version: 0.5.3
   resolution: "source-map-resolve@npm:0.5.3"
@@ -14834,6 +15572,13 @@ __metadata:
   languageName: node
   linkType: hard
 
+"stackback@npm:0.0.2":
+  version: 0.0.2
+  resolution: "stackback@npm:0.0.2"
+  checksum: 2d4dc4e64e2db796de4a3c856d5943daccdfa3dd092e452a1ce059c81e9a9c29e0b9badba91b43ef0d5ff5c04ee62feb3bcc559a804e16faf447bac2d883aa99
+  languageName: node
+  linkType: hard
+
 "stackframe@npm:^1.3.4":
   version: 1.3.4
   resolution: "stackframe@npm:1.3.4"
@@ -14877,6 +15622,13 @@ __metadata:
   languageName: node
   linkType: hard
 
+"std-env@npm:^3.5.0":
+  version: 3.7.0
+  resolution: "std-env@npm:3.7.0"
+  checksum: 4f489d13ff2ab838c9acd4ed6b786b51aa52ecacdfeaefe9275fcb220ff2ac80c6e95674723508fd29850a694569563a8caaaea738eb82ca16429b3a0b50e510
+  languageName: node
+  linkType: hard
+
 "store2@npm:^2.12.0":
   version: 2.13.2
   resolution: "store2@npm:2.13.2"
@@ -15061,6 +15813,13 @@ __metadata:
   languageName: node
   linkType: hard
 
+"strip-final-newline@npm:^3.0.0":
+  version: 3.0.0
+  resolution: "strip-final-newline@npm:3.0.0"
+  checksum: 23ee263adfa2070cd0f23d1ac14e2ed2f000c9b44229aec9c799f1367ec001478469560abefd00c5c99ee6f0b31c137d53ec6029c53e9f32a93804e18c201050
+  languageName: node
+  linkType: hard
+
 "strip-indent@npm:^1.0.1":
   version: 1.0.1
   resolution: "strip-indent@npm:1.0.1"
@@ -15088,6 +15847,15 @@ __metadata:
   languageName: node
   linkType: hard
 
+"strip-literal@npm:^2.0.0":
+  version: 2.1.0
+  resolution: "strip-literal@npm:2.1.0"
+  dependencies:
+    js-tokens: ^9.0.0
+  checksum: 37c2072634d2de11a3644fe1bcf4abd566d85e89f0d8e8b10d35d04e7bef962e7c112fbe5b805ce63e59dfacedc240356eeef57976351502966b7c64b742c6ac
+  languageName: node
+  linkType: hard
+
 "style-loader@npm:^1.3.0":
   version: 1.3.0
   resolution: "style-loader@npm:1.3.0"
@@ -15403,17 +16171,24 @@ __metadata:
   languageName: node
   linkType: hard
 
-"tinypool@npm:^0.2.4":
-  version: 0.2.4
-  resolution: "tinypool@npm:0.2.4"
-  checksum: f050bd36c89529a2a0d3f9c1fdbba3f317114e3ee6eb5d5ba72c51e887d45ef3ef8d8533fb2ca2eba7189d19d2231712b81b3a75e099248532f5563369929c33
+"tinybench@npm:^2.5.1":
+  version: 2.8.0
+  resolution: "tinybench@npm:2.8.0"
+  checksum: 024a307c6a71f6e2903e110952457ee3dfa606093b45d7f49efcfd01d452650e099474080677ff650b0fd76b49074425ac68ff2a70561699a78515a278bf0862
   languageName: node
   linkType: hard
 
-"tinyspy@npm:^1.0.0":
-  version: 1.0.0
-  resolution: "tinyspy@npm:1.0.0"
-  checksum: f9a7cea406db9b0f99a4ef162eb0a45d88fc36facbc309702c8d568283baa363ab3c4138d8402fbfdef7a8d3157ff7cfae3e99ec6c75d8f684bd7b23485b5ec5
+"tinypool@npm:^0.8.3":
+  version: 0.8.4
+  resolution: "tinypool@npm:0.8.4"
+  checksum: d40c40e062d5eeae85dadc39294dde6bc7b9a7a7cf0c972acbbe5a2b42491dfd4c48381c1e48bbe02aff4890e63de73d115b2e7de2ce4c81356aa5e654a43caf
+  languageName: node
+  linkType: hard
+
+"tinyspy@npm:^2.2.0":
+  version: 2.2.1
+  resolution: "tinyspy@npm:2.2.1"
+  checksum: 170d6232e87f9044f537b50b406a38fbfd6f79a261cd12b92879947bd340939a833a678632ce4f5c4a6feab4477e9c21cd43faac3b90b68b77dd0536c4149736
   languageName: node
   linkType: hard
 
@@ -15861,7 +16636,7 @@ __metadata:
   languageName: node
   linkType: hard
 
-"type-detect@npm:^4.0.0, type-detect@npm:^4.0.5":
+"type-detect@npm:^4.0.0, type-detect@npm:^4.0.8":
   version: 4.0.8
   resolution: "type-detect@npm:4.0.8"
   checksum: 62b5628bff67c0eb0b66afa371bd73e230399a8d2ad30d852716efcc4656a7516904570cd8631a49a3ce57c10225adf5d0cbdcb47f6b0255fe6557c453925a15
@@ -15958,6 +16733,13 @@ __metadata:
   languageName: node
   linkType: hard
 
+"ufo@npm:^1.5.3":
+  version: 1.5.3
+  resolution: "ufo@npm:1.5.3"
+  checksum: 2f54fa543b2e689cc4ab341fe2194937afe37c5ee43cd782e6ecc184e36859e84d4197a43ae4cd6e9a56f793ca7c5b950dfff3f16fadaeef9b6b88b05c88c8ef
+  languageName: node
+  linkType: hard
+
 "uglify-js@npm:^3.1.4":
   version: 3.16.2
   resolution: "uglify-js@npm:3.16.2"
@@ -16465,9 +17247,24 @@ __metadata:
   languageName: node
   linkType: hard
 
-"vite@npm:^2.9.12 || ^3.0.0-0":
-  version: 3.0.0-beta.8
-  resolution: "vite@npm:3.0.0-beta.8"
+"vite-node@npm:1.5.3":
+  version: 1.5.3
+  resolution: "vite-node@npm:1.5.3"
+  dependencies:
+    cac: ^6.7.14
+    debug: ^4.3.4
+    pathe: ^1.1.1
+    picocolors: ^1.0.0
+    vite: ^5.0.0
+  bin:
+    vite-node: vite-node.mjs
+  checksum: 6f3a851f5490ed8b7fa9ca2a2e6b2b0f6f74569dbd606b6437458792c3f0423deae1c9f5127a3d35c6d47b3f32dce459c406dd59f5cb9f59b52f86287b73e153
+  languageName: node
+  linkType: hard
+
+"vite@npm:^3.0.4":
+  version: 3.0.4
+  resolution: "vite@npm:3.0.4"
   dependencies:
     esbuild: ^0.14.47
     fsevents: ~2.3.2
@@ -16493,78 +17290,97 @@ __metadata:
       optional: true
   bin:
     vite: bin/vite.js
-  checksum: 22c66cbcf69a428c0844d76158ac8e65337915b741105e68461427b880dd345eb1f8573c766bdfdeb4c2d3df7b84f85833663b4b3fe8f20f7d7b381f952c4726
+  checksum: f13eceb94f7b399942ce5e7c10df73314f7b073171d6594228b078cc1203042c4cdb9e8356fe64ad444c3533c31437abb3c64ac56478f0865fab598e924cf68b
   languageName: node
   linkType: hard
 
-"vite@npm:^3.0.4":
-  version: 3.0.4
-  resolution: "vite@npm:3.0.4"
+"vite@npm:^5.0.0":
+  version: 5.2.11
+  resolution: "vite@npm:5.2.11"
   dependencies:
-    esbuild: ^0.14.47
-    fsevents: ~2.3.2
-    postcss: ^8.4.14
-    resolve: ^1.22.1
-    rollup: ^2.75.6
+    esbuild: ^0.20.1
+    fsevents: ~2.3.3
+    postcss: ^8.4.38
+    rollup: ^4.13.0
   peerDependencies:
+    "@types/node": ^18.0.0 || >=20.0.0
     less: "*"
+    lightningcss: ^1.21.0
     sass: "*"
     stylus: "*"
+    sugarss: "*"
     terser: ^5.4.0
   dependenciesMeta:
     fsevents:
       optional: true
   peerDependenciesMeta:
+    "@types/node":
+      optional: true
     less:
       optional: true
+    lightningcss:
+      optional: true
     sass:
       optional: true
     stylus:
       optional: true
+    sugarss:
+      optional: true
     terser:
       optional: true
   bin:
     vite: bin/vite.js
-  checksum: f13eceb94f7b399942ce5e7c10df73314f7b073171d6594228b078cc1203042c4cdb9e8356fe64ad444c3533c31437abb3c64ac56478f0865fab598e924cf68b
+  checksum: 3f9f976cc6ada93aca56abcc683a140e807725b351abc241a1ec0763ec561a4bf5760e1ad94de4e59505904ddaa88727de66af02f61ecf540c7720045de55d0a
   languageName: node
   linkType: hard
 
-"vitest@npm:^0.20.2":
-  version: 0.20.2
-  resolution: "vitest@npm:0.20.2"
+"vitest@npm:1.5.3, vitest@npm:^1.5.3":
+  version: 1.5.3
+  resolution: "vitest@npm:1.5.3"
   dependencies:
-    "@types/chai": ^4.3.1
-    "@types/chai-subset": ^1.3.3
-    "@types/node": "*"
-    chai: ^4.3.6
+    "@vitest/expect": 1.5.3
+    "@vitest/runner": 1.5.3
+    "@vitest/snapshot": 1.5.3
+    "@vitest/spy": 1.5.3
+    "@vitest/utils": 1.5.3
+    acorn-walk: ^8.3.2
+    chai: ^4.3.10
     debug: ^4.3.4
-    local-pkg: ^0.4.2
-    tinypool: ^0.2.4
-    tinyspy: ^1.0.0
-    vite: ^2.9.12 || ^3.0.0-0
+    execa: ^8.0.1
+    local-pkg: ^0.5.0
+    magic-string: ^0.30.5
+    pathe: ^1.1.1
+    picocolors: ^1.0.0
+    std-env: ^3.5.0
+    strip-literal: ^2.0.0
+    tinybench: ^2.5.1
+    tinypool: ^0.8.3
+    vite: ^5.0.0
+    vite-node: 1.5.3
+    why-is-node-running: ^2.2.2
   peerDependencies:
     "@edge-runtime/vm": "*"
-    "@vitest/browser": "*"
-    "@vitest/ui": "*"
-    c8: "*"
+    "@types/node": ^18.0.0 || >=20.0.0
+    "@vitest/browser": 1.5.3
+    "@vitest/ui": 1.5.3
     happy-dom: "*"
     jsdom: "*"
   peerDependenciesMeta:
     "@edge-runtime/vm":
       optional: true
+    "@types/node":
+      optional: true
     "@vitest/browser":
       optional: true
     "@vitest/ui":
       optional: true
-    c8:
-      optional: true
     happy-dom:
       optional: true
     jsdom:
       optional: true
   bin:
     vitest: vitest.mjs
-  checksum: eea156689f119bd45cf3cfaa2d0af42f3c86e3952fd4cec0e8b6ee67da9b4ad4266180573f6750293285324f40535b698795eff520da535419fff076d1e3bc3a
+  checksum: 1cd965e34dcd9a3f4dead3b455470d1fc4c7aa09ca7a3e0b2493c85cf2d5e9913aace1ee41cb17caaada4e4ba3effa552a2ae5f3cc689b6899a5ef85e856e8c6
   languageName: node
   linkType: hard
 
@@ -16945,6 +17761,18 @@ __metadata:
   languageName: node
   linkType: hard
 
+"why-is-node-running@npm:^2.2.2":
+  version: 2.2.2
+  resolution: "why-is-node-running@npm:2.2.2"
+  dependencies:
+    siginfo: ^2.0.0
+    stackback: 0.0.2
+  bin:
+    why-is-node-running: cli.js
+  checksum: 50820428f6a82dfc3cbce661570bcae9b658723217359b6037b67e495255409b4c8bc7931745f5c175df71210450464517cab32b2f7458ac9c40b4925065200a
+  languageName: node
+  linkType: hard
+
 "wide-align@npm:^1.1.2, wide-align@npm:^1.1.5":
   version: 1.1.5
   resolution: "wide-align@npm:1.1.5"
@@ -17170,6 +17998,13 @@ __metadata:
   languageName: node
   linkType: hard
 
+"yocto-queue@npm:^1.0.0":
+  version: 1.0.0
+  resolution: "yocto-queue@npm:1.0.0"
+  checksum: 2cac84540f65c64ccc1683c267edce396b26b1e931aa429660aefac8fbe0188167b7aee815a3c22fa59a28a58d898d1a2b1825048f834d8d629f4c2a5d443801
+  languageName: node
+  linkType: hard
+
 "zwitch@npm:^1.0.0":
   version: 1.0.5
   resolution: "zwitch@npm:1.0.5"

From 922b3a3afb5a45d5855c9bbecd3685c9d694c302 Mon Sep 17 00:00:00 2001
From: sverhoeven <s.verhoeven@esciencecenter.nl>
Date: Fri, 3 May 2024 10:53:19 +0200
Subject: [PATCH 05/11] Fix group overlap with prop name

---
 packages/core/src/grouper.test.ts |  2 +-
 packages/core/src/grouper.ts      | 61 ++++++++++++++++++++-----------
 2 files changed, 40 insertions(+), 23 deletions(-)

diff --git a/packages/core/src/grouper.test.ts b/packages/core/src/grouper.test.ts
index 0af8a23..145e475 100644
--- a/packages/core/src/grouper.test.ts
+++ b/packages/core/src/grouper.test.ts
@@ -5,7 +5,7 @@ import { groupCatalog, groupParameters, groupSchema, groupUiSchema, unGroupParam
 import { ICatalog, IParameters } from './types'
 
 function deepCopy<T> (value: T): T {
-  return JSON.parse(JSON.stringify(value))
+  return structuredClone(value)
 }
 
 describe('given a schema without any property with ui:group in uiSchema', () => {
diff --git a/packages/core/src/grouper.ts b/packages/core/src/grouper.ts
index 4563f49..c7bff7a 100644
--- a/packages/core/src/grouper.ts
+++ b/packages/core/src/grouper.ts
@@ -29,7 +29,7 @@ export function groupSchema (
   schema: JSONSchema7,
   uiSchema: UiSchema
 ): JSONSchema7 {
-  const newSchema = JSON.parse(JSON.stringify(schema))
+  const newSchema = structuredClone(schema)
 
   // Handle overlap between groups and direct prop names.
   const definedGroups = new Set(
@@ -37,28 +37,38 @@ export function groupSchema (
       .filter((v) => 'ui:group' in v)
       .map((v) => v['ui:group'])
   )
-  // TODO direct prop with same name as group throw error
-  // TODO prop with group and same name as any group should be nested first
-  // todos should replace lines 44-65
-
-  const directProps = schema.properties ?? {}
-  const directPropNamesWithSameNameAsGroup = new Set(
-    Object.keys(directProps).filter((k) => definedGroups.has(k))
+  const propsWithGroup = new Set(
+    Object.keys(uiSchema).filter((k) => 'ui:group' in uiSchema[k])
   )
-  for (const k of directPropNamesWithSameNameAsGroup) {
-    const propHasGroup =
-      k in uiSchema && 'ui:group' in uiSchema[k] && 'ui:group' in uiSchema[k]
-    if (!(propHasGroup && uiSchema[k]['ui:group'] === k)) {
-      throw new Error(
-        `Can not have group and un-grouped parameter with same name ${k}`
-      )
-    }
-    // Prop has same name as its group so nest it
-    const v = newSchema.properties[k]
-    newSchema.properties[k] = {
+  const allProps = new Set(Object.keys(schema.properties ?? {}))
+  const grouplessProps = new Set([...allProps].filter((x) => !propsWithGroup.has(x)))
+  const grouplessPropsWithSameNameAsGroup = new Set(
+    [...grouplessProps].filter((x) => definedGroups.has(x))
+  )
+  // direct prop with same name as group throw error
+  if (grouplessPropsWithSameNameAsGroup.size > 0) {
+    const msg = Array.from(grouplessPropsWithSameNameAsGroup).join(', ')
+    throw new Error(
+      `Can not have group and un-grouped parameter with same name ${msg}`
+    )
+  }
+
+  if (!('properties' in newSchema && typeof newSchema.properties === 'object')) {
+    throw new Error('Schema must have properties')
+  }
+
+  // prop with group and same name as any group should be nested first
+  const propsWithSameNameAsAnyGroup = new Set(Object.entries(uiSchema).filter(([k, v]) => 'ui:group' in v && definedGroups.has(k)).map((d) => d[0]))
+  for (const k of propsWithSameNameAsAnyGroup) {
+    const prop = newSchema.properties[k]
+    /* eslint-disable @typescript-eslint/no-dynamic-delete */
+    delete newSchema.properties[k]
+    /* eslint-enable @typescript-eslint/no-dynamic-delete */
+    const group = uiSchema[k]['ui:group']
+    newSchema.properties[group] = {
       type: 'object',
       properties: {
-        [k]: v
+        [k]: prop
       },
       additionalProperties: false
     }
@@ -66,8 +76,11 @@ export function groupSchema (
 
   Object.entries(uiSchema).forEach(([k, v]) => {
     // TODO recursivly, now only loops over first direct props
-    if ('ui:group' in v && !directPropNamesWithSameNameAsGroup.has(k)) {
+    if ('ui:group' in v && !propsWithSameNameAsAnyGroup.has(k)) {
       const group = v['ui:group']
+      if (!('properties' in newSchema && typeof newSchema.properties === 'object')) {
+        throw new Error('Schema must have properties')
+      }
       if (!(group in newSchema.properties)) {
         newSchema.properties[group] = {
           type: 'object',
@@ -75,7 +88,11 @@ export function groupSchema (
           additionalProperties: false
         }
       }
-      newSchema.properties[group].properties[k] = newSchema.properties[k]
+      const newGroup = newSchema.properties[group]
+      if (typeof newGroup === 'boolean' || newGroup.properties === undefined) {
+        throw new Error('Schema must have properties')
+      }
+      newGroup.properties[k] = newSchema.properties[k]
       // Remove k as it now is in the group
       /* eslint-disable @typescript-eslint/no-dynamic-delete */
       delete newSchema.properties[k]

From 6c1cec417a12a940d083f728f31640fbe849de29 Mon Sep 17 00:00:00 2001
From: sverhoeven <s.verhoeven@esciencecenter.nl>
Date: Fri, 3 May 2024 11:07:52 +0200
Subject: [PATCH 06/11] Add test coverage dependency

---
 packages/core/package.json |   1 +
 packages/form/package.json |   1 +
 yarn.lock                  | 176 ++++++++++++++++++++++++++++++++++++-
 3 files changed, 177 insertions(+), 1 deletion(-)

diff --git a/packages/core/package.json b/packages/core/package.json
index 1df314b..5278eb1 100644
--- a/packages/core/package.json
+++ b/packages/core/package.json
@@ -51,6 +51,7 @@
     "@types/js-yaml": "^4.0.5",
     "@types/papaparse": "^5.3.2",
     "@types/react-syntax-highlighter": "^13.5.2",
+    "@vitest/coverage-v8": "^1.5.3",
     "babel-loader": "^8.2.5",
     "c8": "^7.11.0",
     "jsdom": "^20.0.0",
diff --git a/packages/form/package.json b/packages/form/package.json
index 3c1fbe7..8e63877 100644
--- a/packages/form/package.json
+++ b/packages/form/package.json
@@ -54,6 +54,7 @@
     "@storybook/react": "^6.5.9",
     "@storybook/testing-library": "^0.0.13",
     "@testing-library/react": "12",
+    "@vitest/coverage-v8": "^1.5.3",
     "babel-loader": "^8.2.5",
     "jsdom": "^20.0.0",
     "postcss": "^8.4.14",
diff --git a/yarn.lock b/yarn.lock
index 2ffe88c..534b764 100644
--- a/yarn.lock
+++ b/yarn.lock
@@ -15,6 +15,16 @@ __metadata:
   languageName: node
   linkType: hard
 
+"@ampproject/remapping@npm:^2.2.1":
+  version: 2.3.0
+  resolution: "@ampproject/remapping@npm:2.3.0"
+  dependencies:
+    "@jridgewell/gen-mapping": ^0.3.5
+    "@jridgewell/trace-mapping": ^0.3.24
+  checksum: d3ad7b89d973df059c4e8e6d7c972cbeb1bb2f18f002a3bd04ae0707da214cb06cc06929b65aa2313b9347463df2914772298bae8b1d7973f246bb3f2ab3e8f0
+  languageName: node
+  linkType: hard
+
 "@babel/code-frame@npm:7.12.11":
   version: 7.12.11
   resolution: "@babel/code-frame@npm:7.12.11"
@@ -358,6 +368,13 @@ __metadata:
   languageName: node
   linkType: hard
 
+"@babel/helper-string-parser@npm:^7.24.1":
+  version: 7.24.1
+  resolution: "@babel/helper-string-parser@npm:7.24.1"
+  checksum: 8404e865b06013979a12406aab4c0e8d2e377199deec09dfe9f57b833b0c9ce7b6e8c1c553f2da8d0bcd240c5005bd7a269f4fef0d628aeb7d5fe035c436fb67
+  languageName: node
+  linkType: hard
+
 "@babel/helper-validator-identifier@npm:^7.18.6":
   version: 7.18.6
   resolution: "@babel/helper-validator-identifier@npm:7.18.6"
@@ -372,6 +389,13 @@ __metadata:
   languageName: node
   linkType: hard
 
+"@babel/helper-validator-identifier@npm:^7.24.5":
+  version: 7.24.5
+  resolution: "@babel/helper-validator-identifier@npm:7.24.5"
+  checksum: 75d6f9f475c08f3be87bae4953e9b8d8c72983e16ed2860870b328d048cb20dccb4fcbf85eacbdd817ea1efbb38552a6db9046e2e37bfe13bdec44ac8939024c
+  languageName: node
+  linkType: hard
+
 "@babel/helper-validator-option@npm:^7.18.6":
   version: 7.18.6
   resolution: "@babel/helper-validator-option@npm:7.18.6"
@@ -422,6 +446,15 @@ __metadata:
   languageName: node
   linkType: hard
 
+"@babel/parser@npm:^7.24.4":
+  version: 7.24.5
+  resolution: "@babel/parser@npm:7.24.5"
+  bin:
+    parser: ./bin/babel-parser.js
+  checksum: a251ea41bf8b5f61048beb320d43017aff68af5a3506bd2ef392180f5fa32c1061513171d582bb3d46ea48e3659dece8b3ba52511a2566066e58abee300ce2a0
+  languageName: node
+  linkType: hard
+
 "@babel/plugin-bugfix-safari-id-destructuring-collision-in-function-expression@npm:^7.18.6":
   version: 7.18.6
   resolution: "@babel/plugin-bugfix-safari-id-destructuring-collision-in-function-expression@npm:7.18.6"
@@ -1625,6 +1658,17 @@ __metadata:
   languageName: node
   linkType: hard
 
+"@babel/types@npm:^7.24.0":
+  version: 7.24.5
+  resolution: "@babel/types@npm:7.24.5"
+  dependencies:
+    "@babel/helper-string-parser": ^7.24.1
+    "@babel/helper-validator-identifier": ^7.24.5
+    to-fast-properties: ^2.0.0
+  checksum: 8eeeacd996593b176e649ee49d8dc3f26f9bb6aa1e3b592030e61a0e58ea010fb018dccc51e5314c8139409ea6cbab02e29b33e674e1f6962d8e24c52da6375b
+  languageName: node
+  linkType: hard
+
 "@base2/pretty-print-object@npm:1.0.1":
   version: 1.0.1
   resolution: "@base2/pretty-print-object@npm:1.0.1"
@@ -2234,6 +2278,7 @@ __metadata:
     "@types/js-yaml": ^4.0.5
     "@types/papaparse": ^5.3.2
     "@types/react-syntax-highlighter": ^13.5.2
+    "@vitest/coverage-v8": ^1.5.3
     "@zip.js/zip.js": ^2.3.23
     ajv: ^8.9.0
     ajv-formats: ^2.1.1
@@ -2281,6 +2326,7 @@ __metadata:
     "@storybook/react": ^6.5.9
     "@storybook/testing-library": ^0.0.13
     "@testing-library/react": 12
+    "@vitest/coverage-v8": ^1.5.3
     ajv: ^8.9.0
     babel-loader: ^8.2.5
     jsdom: ^20.0.0
@@ -2431,6 +2477,17 @@ __metadata:
   languageName: node
   linkType: hard
 
+"@jridgewell/gen-mapping@npm:^0.3.5":
+  version: 0.3.5
+  resolution: "@jridgewell/gen-mapping@npm:0.3.5"
+  dependencies:
+    "@jridgewell/set-array": ^1.2.1
+    "@jridgewell/sourcemap-codec": ^1.4.10
+    "@jridgewell/trace-mapping": ^0.3.24
+  checksum: ff7a1764ebd76a5e129c8890aa3e2f46045109dabde62b0b6c6a250152227647178ff2069ea234753a690d8f3c4ac8b5e7b267bbee272bffb7f3b0a370ab6e52
+  languageName: node
+  linkType: hard
+
 "@jridgewell/resolve-uri@npm:^3.0.3":
   version: 3.1.0
   resolution: "@jridgewell/resolve-uri@npm:3.1.0"
@@ -2438,6 +2495,13 @@ __metadata:
   languageName: node
   linkType: hard
 
+"@jridgewell/resolve-uri@npm:^3.1.0":
+  version: 3.1.2
+  resolution: "@jridgewell/resolve-uri@npm:3.1.2"
+  checksum: 83b85f72c59d1c080b4cbec0fef84528963a1b5db34e4370fa4bd1e3ff64a0d80e0cee7369d11d73c704e0286fb2865b530acac7a871088fbe92b5edf1000870
+  languageName: node
+  linkType: hard
+
 "@jridgewell/set-array@npm:^1.0.0, @jridgewell/set-array@npm:^1.0.1":
   version: 1.1.2
   resolution: "@jridgewell/set-array@npm:1.1.2"
@@ -2445,6 +2509,13 @@ __metadata:
   languageName: node
   linkType: hard
 
+"@jridgewell/set-array@npm:^1.2.1":
+  version: 1.2.1
+  resolution: "@jridgewell/set-array@npm:1.2.1"
+  checksum: 832e513a85a588f8ed4f27d1279420d8547743cc37fcad5a5a76fc74bb895b013dfe614d0eed9cb860048e6546b798f8f2652020b4b2ba0561b05caa8c654b10
+  languageName: node
+  linkType: hard
+
 "@jridgewell/source-map@npm:^0.3.2":
   version: 0.3.2
   resolution: "@jridgewell/source-map@npm:0.3.2"
@@ -2462,7 +2533,7 @@ __metadata:
   languageName: node
   linkType: hard
 
-"@jridgewell/sourcemap-codec@npm:^1.4.15":
+"@jridgewell/sourcemap-codec@npm:^1.4.14, @jridgewell/sourcemap-codec@npm:^1.4.15":
   version: 1.4.15
   resolution: "@jridgewell/sourcemap-codec@npm:1.4.15"
   checksum: b881c7e503db3fc7f3c1f35a1dd2655a188cc51a3612d76efc8a6eb74728bef5606e6758ee77423e564092b4a518aba569bbb21c9bac5ab7a35b0c6ae7e344c8
@@ -2479,6 +2550,16 @@ __metadata:
   languageName: node
   linkType: hard
 
+"@jridgewell/trace-mapping@npm:^0.3.23, @jridgewell/trace-mapping@npm:^0.3.24":
+  version: 0.3.25
+  resolution: "@jridgewell/trace-mapping@npm:0.3.25"
+  dependencies:
+    "@jridgewell/resolve-uri": ^3.1.0
+    "@jridgewell/sourcemap-codec": ^1.4.14
+  checksum: 9d3c40d225e139987b50c48988f8717a54a8c994d8a948ee42e1412e08988761d0754d7d10b803061cc3aebf35f92a5dbbab493bd0e1a9ef9e89a2130e83ba34
+  languageName: node
+  linkType: hard
+
 "@ltd/j-toml@npm:^1.24.0":
   version: 1.30.0
   resolution: "@ltd/j-toml@npm:1.30.0"
@@ -4686,6 +4767,29 @@ __metadata:
   languageName: node
   linkType: hard
 
+"@vitest/coverage-v8@npm:^1.5.3":
+  version: 1.5.3
+  resolution: "@vitest/coverage-v8@npm:1.5.3"
+  dependencies:
+    "@ampproject/remapping": ^2.2.1
+    "@bcoe/v8-coverage": ^0.2.3
+    debug: ^4.3.4
+    istanbul-lib-coverage: ^3.2.2
+    istanbul-lib-report: ^3.0.1
+    istanbul-lib-source-maps: ^5.0.4
+    istanbul-reports: ^3.1.6
+    magic-string: ^0.30.5
+    magicast: ^0.3.3
+    picocolors: ^1.0.0
+    std-env: ^3.5.0
+    strip-literal: ^2.0.0
+    test-exclude: ^6.0.0
+  peerDependencies:
+    vitest: 1.5.3
+  checksum: 9e43aed30ca29d1693ce91ce2c55b7445ae57b4fb016ecb5baea829407ba48c636e3627764a50b0807830b93dd9a069da39439d8c9f9bfb2ebbe38745f6578cc
+  languageName: node
+  linkType: hard
+
 "@vitest/expect@npm:1.5.3":
   version: 1.5.3
   resolution: "@vitest/expect@npm:1.5.3"
@@ -11006,6 +11110,13 @@ __metadata:
   languageName: node
   linkType: hard
 
+"istanbul-lib-coverage@npm:^3.2.2":
+  version: 3.2.2
+  resolution: "istanbul-lib-coverage@npm:3.2.2"
+  checksum: 2367407a8d13982d8f7a859a35e7f8dd5d8f75aae4bb5484ede3a9ea1b426dc245aff28b976a2af48ee759fdd9be374ce2bd2669b644f31e76c5f46a2e29a831
+  languageName: node
+  linkType: hard
+
 "istanbul-lib-instrument@npm:^5.0.4":
   version: 5.2.0
   resolution: "istanbul-lib-instrument@npm:5.2.0"
@@ -11030,6 +11141,28 @@ __metadata:
   languageName: node
   linkType: hard
 
+"istanbul-lib-report@npm:^3.0.1":
+  version: 3.0.1
+  resolution: "istanbul-lib-report@npm:3.0.1"
+  dependencies:
+    istanbul-lib-coverage: ^3.0.0
+    make-dir: ^4.0.0
+    supports-color: ^7.1.0
+  checksum: fd17a1b879e7faf9bb1dc8f80b2a16e9f5b7b8498fe6ed580a618c34df0bfe53d2abd35bf8a0a00e628fb7405462576427c7df20bbe4148d19c14b431c974b21
+  languageName: node
+  linkType: hard
+
+"istanbul-lib-source-maps@npm:^5.0.4":
+  version: 5.0.4
+  resolution: "istanbul-lib-source-maps@npm:5.0.4"
+  dependencies:
+    "@jridgewell/trace-mapping": ^0.3.23
+    debug: ^4.1.1
+    istanbul-lib-coverage: ^3.0.0
+  checksum: f34550c75b957312787eaa86a6c115b269f090905c0128f8acdb553a8d9b6562581be0e7c0b68247d97172fdfd6445517cbe46651f984453cce3c517b2e931ad
+  languageName: node
+  linkType: hard
+
 "istanbul-reports@npm:^3.1.4":
   version: 3.1.4
   resolution: "istanbul-reports@npm:3.1.4"
@@ -11040,6 +11173,16 @@ __metadata:
   languageName: node
   linkType: hard
 
+"istanbul-reports@npm:^3.1.6":
+  version: 3.1.7
+  resolution: "istanbul-reports@npm:3.1.7"
+  dependencies:
+    html-escaper: ^2.0.0
+    istanbul-lib-report: ^3.0.0
+  checksum: 2072db6e07bfbb4d0eb30e2700250636182398c1af811aea5032acb219d2080f7586923c09fa194029efd6b92361afb3dcbe1ebcc3ee6651d13340f7c6c4ed95
+  languageName: node
+  linkType: hard
+
 "iterate-iterator@npm:^1.0.1":
   version: 1.0.2
   resolution: "iterate-iterator@npm:1.0.2"
@@ -11820,6 +11963,17 @@ __metadata:
   languageName: node
   linkType: hard
 
+"magicast@npm:^0.3.3":
+  version: 0.3.4
+  resolution: "magicast@npm:0.3.4"
+  dependencies:
+    "@babel/parser": ^7.24.4
+    "@babel/types": ^7.24.0
+    source-map-js: ^1.2.0
+  checksum: 9cc84b8424d2c9b03533c16abec5b29f3897619a07714232c602382660867140858f54f482da2b9968ba4b89e198e66578f483415256c4eb2656ae7265bbb2de
+  languageName: node
+  linkType: hard
+
 "make-dir@npm:^2.0.0, make-dir@npm:^2.1.0":
   version: 2.1.0
   resolution: "make-dir@npm:2.1.0"
@@ -11839,6 +11993,15 @@ __metadata:
   languageName: node
   linkType: hard
 
+"make-dir@npm:^4.0.0":
+  version: 4.0.0
+  resolution: "make-dir@npm:4.0.0"
+  dependencies:
+    semver: ^7.5.3
+  checksum: bf0731a2dd3aab4db6f3de1585cea0b746bb73eb5a02e3d8d72757e376e64e6ada190b1eddcde5b2f24a81b688a9897efd5018737d05e02e2a671dda9cff8a8a
+  languageName: node
+  linkType: hard
+
 "make-fetch-happen@npm:^10.0.3":
   version: 10.1.8
   resolution: "make-fetch-happen@npm:10.1.8"
@@ -15095,6 +15258,17 @@ __metadata:
   languageName: node
   linkType: hard
 
+"semver@npm:^7.5.3":
+  version: 7.6.0
+  resolution: "semver@npm:7.6.0"
+  dependencies:
+    lru-cache: ^6.0.0
+  bin:
+    semver: bin/semver.js
+  checksum: 7427f05b70786c696640edc29fdd4bc33b2acf3bbe1740b955029044f80575fc664e1a512e4113c3af21e767154a94b4aa214bf6cd6e42a1f6dba5914e0b208c
+  languageName: node
+  linkType: hard
+
 "send@npm:0.18.0":
   version: 0.18.0
   resolution: "send@npm:0.18.0"

From 4017d6c9df1a24422b6c598f4e63a85002dc0806 Mon Sep 17 00:00:00 2001
From: sverhoeven <s.verhoeven@esciencecenter.nl>
Date: Fri, 3 May 2024 11:16:13 +0200
Subject: [PATCH 07/11] Fix tests

---
 packages/core/src/grouper.ts | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/packages/core/src/grouper.ts b/packages/core/src/grouper.ts
index c7bff7a..7c1e2e5 100644
--- a/packages/core/src/grouper.ts
+++ b/packages/core/src/grouper.ts
@@ -54,7 +54,7 @@ export function groupSchema (
   }
 
   if (!('properties' in newSchema && typeof newSchema.properties === 'object')) {
-    throw new Error('Schema must have properties')
+    return newSchema
   }
 
   // prop with group and same name as any group should be nested first
@@ -90,7 +90,7 @@ export function groupSchema (
       }
       const newGroup = newSchema.properties[group]
       if (typeof newGroup === 'boolean' || newGroup.properties === undefined) {
-        throw new Error('Schema must have properties')
+        return
       }
       newGroup.properties[k] = newSchema.properties[k]
       // Remove k as it now is in the group

From 55bdb1487c81095371aa4e74928ad32f17da3a80 Mon Sep 17 00:00:00 2001
From: sverhoeven <s.verhoeven@esciencecenter.nl>
Date: Fri, 3 May 2024 12:16:25 +0200
Subject: [PATCH 08/11] Update CHANGELOG

---
 CHANGELOG.md | 9 +++++++++
 1 file changed, 9 insertions(+)

diff --git a/CHANGELOG.md b/CHANGELOG.md
index a5025e0..2bdcca7 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -6,6 +6,15 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
 
 ## Unreleased
 
+### Changed
+
+* Improved handling of groups in ui schema 
+
+### Fixed
+
+* Hide the exit module ([#153](https://github.com/i-VRESSE/workflow-builder/issues/153))
+
+
 ## @i-vresse/wb-core 2.0.1 - 2024-03-25
 
 ### Changed

From 298c54169f6f51b37059f9747d95b948bf9fb97a Mon Sep 17 00:00:00 2001
From: Stefan Verhoeven <stefan.verhoeven@gmail.com>
Date: Tue, 7 May 2024 10:36:59 +0200
Subject: [PATCH 09/11] Nodes which have single collapsibe field are expanded
 initially

---
 packages/core/src/store.ts | 24 +++++++++++++++++++++++-
 1 file changed, 23 insertions(+), 1 deletion(-)

diff --git a/packages/core/src/store.ts b/packages/core/src/store.ts
index 753bb69..3fe9936 100644
--- a/packages/core/src/store.ts
+++ b/packages/core/src/store.ts
@@ -404,6 +404,27 @@ export function useSelectedNodeFormSchema (): JSONSchema7 | undefined {
   return useRecoilValue(selectedNodeFormSchemaState)
 }
 
+function expandSingleCollapsibleField (uiSchema: UiSchema): UiSchema {
+  const nrCollapsibles = Object.values(uiSchema).filter(
+    (v) => v['ui:field'] === 'collapsible'
+  ).length
+  if (nrCollapsibles === 1) {
+    const firstCollapsibleKey = Object.keys(uiSchema).find(
+      (k) => uiSchema[k]['ui:field'] === 'collapsible'
+    )
+    if (firstCollapsibleKey !== undefined) {
+      return {
+        ...uiSchema,
+        [firstCollapsibleKey]: {
+          ...uiSchema[firstCollapsibleKey],
+          'ui:collapsed': false
+        }
+      }
+    }
+  }
+  return uiSchema
+}
+
 const selectedNodeFormUiSchemaState = selector<UiSchema | undefined>({
   key: 'selectedNodeFormUiSchema',
   get: ({ get }) => {
@@ -419,7 +440,8 @@ const selectedNodeFormUiSchemaState = selector<UiSchema | undefined>({
       moleculeInfos,
       moleculesPropName
     )
-    return uiSchemaWithMolInfo
+
+    return expandSingleCollapsibleField(uiSchemaWithMolInfo)
   }
 })
 

From f2ee9d2d93f82f515a774e6660a370439c1bdda1 Mon Sep 17 00:00:00 2001
From: sverhoeven <s.verhoeven@esciencecenter.nl>
Date: Thu, 16 May 2024 11:16:46 +0200
Subject: [PATCH 10/11] Regen catalog of
 https://github.com/haddocking/haddock3/pull/841/commits/05872896e0a8e86ef53f47b4fb4558e77909a964

---
 .../public/catalog/haddock3.easy.yaml                | 12 ++++++++++++
 .../public/catalog/haddock3.expert.yaml              | 12 ++++++++++++
 .../public/catalog/haddock3.guru.yaml                | 12 ++++++++++++
 3 files changed, 36 insertions(+)

diff --git a/packages/haddock3_catalog/public/catalog/haddock3.easy.yaml b/packages/haddock3_catalog/public/catalog/haddock3.easy.yaml
index 03def31..85b3c3f 100644
--- a/packages/haddock3_catalog/public/catalog/haddock3.easy.yaml
+++ b/packages/haddock3_catalog/public/catalog/haddock3.easy.yaml
@@ -1105,6 +1105,16 @@ nodes:
         $comment: Atoms to be considered during the analysis. If false (default),
           only backbone atoms will be considered, otherwise all the heavy-atoms.
         type: boolean
+      contact_distance_cutoff:
+        default: 5.0
+        title: Distance cutoff defining a contact.
+        description: Cutoff distance (in Angstrom) defining a contact.
+        $comment: Distance (in Angstrom) cutoff defining a contact. Any atoms within
+          this cutoff range will be used to define the interface. Standard values
+          are usually 3.9 A or 5.0 A.
+        type: number
+        maximum: 30.0
+        minimum: 0.1
     required: []
     additionalProperties: false
   uiSchema:
@@ -1116,6 +1126,8 @@ nodes:
       ui:group: analysis
     allatoms:
       ui:group: analysis
+    contact_distance_cutoff:
+      ui:group: analysis
   tomlSchema: {}
 - id: lightdock
   category: sampling
diff --git a/packages/haddock3_catalog/public/catalog/haddock3.expert.yaml b/packages/haddock3_catalog/public/catalog/haddock3.expert.yaml
index 64cfe5e..f4d6624 100644
--- a/packages/haddock3_catalog/public/catalog/haddock3.expert.yaml
+++ b/packages/haddock3_catalog/public/catalog/haddock3.expert.yaml
@@ -5295,6 +5295,16 @@ nodes:
         $comment: Atoms to be considered during the analysis. If false (default),
           only backbone atoms will be considered, otherwise all the heavy-atoms.
         type: boolean
+      contact_distance_cutoff:
+        default: 5.0
+        title: Distance cutoff defining a contact.
+        description: Cutoff distance (in Angstrom) defining a contact.
+        $comment: Distance (in Angstrom) cutoff defining a contact. Any atoms within
+          this cutoff range will be used to define the interface. Standard values
+          are usually 3.9 A or 5.0 A.
+        type: number
+        maximum: 30.0
+        minimum: 0.1
     required: []
     additionalProperties: false
   uiSchema:
@@ -5306,6 +5316,8 @@ nodes:
       ui:group: analysis
     allatoms:
       ui:group: analysis
+    contact_distance_cutoff:
+      ui:group: analysis
   tomlSchema: {}
 - id: lightdock
   category: sampling
diff --git a/packages/haddock3_catalog/public/catalog/haddock3.guru.yaml b/packages/haddock3_catalog/public/catalog/haddock3.guru.yaml
index 0fe685b..188cd57 100644
--- a/packages/haddock3_catalog/public/catalog/haddock3.guru.yaml
+++ b/packages/haddock3_catalog/public/catalog/haddock3.guru.yaml
@@ -5590,6 +5590,16 @@ nodes:
         $comment: Atoms to be considered during the analysis. If false (default),
           only backbone atoms will be considered, otherwise all the heavy-atoms.
         type: boolean
+      contact_distance_cutoff:
+        default: 5.0
+        title: Distance cutoff defining a contact.
+        description: Cutoff distance (in Angstrom) defining a contact.
+        $comment: Distance (in Angstrom) cutoff defining a contact. Any atoms within
+          this cutoff range will be used to define the interface. Standard values
+          are usually 3.9 A or 5.0 A.
+        type: number
+        maximum: 30.0
+        minimum: 0.1
     required: []
     additionalProperties: false
   uiSchema:
@@ -5603,6 +5613,8 @@ nodes:
       ui:group: analysis
     allatoms:
       ui:group: analysis
+    contact_distance_cutoff:
+      ui:group: analysis
   tomlSchema: {}
 - id: lightdock
   category: sampling

From 6d488440a10c0abc275b9404fc2edf50344cbd20 Mon Sep 17 00:00:00 2001
From: sverhoeven <s.verhoeven@esciencecenter.nl>
Date: Thu, 16 May 2024 11:19:50 +0200
Subject: [PATCH 11/11] Update changelog

---
 CHANGELOG.md | 5 +++--
 1 file changed, 3 insertions(+), 2 deletions(-)

diff --git a/CHANGELOG.md b/CHANGELOG.md
index 2bdcca7..7b028d2 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -8,13 +8,14 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
 
 ### Changed
 
-* Improved handling of groups in ui schema 
+* Autosave ([#144](https://github.com/i-VRESSE/workflow-builder/pull/144))
+* Improved handling of groups in ui schema
+* Nodes with all its properties in a single group is expanded by default
 
 ### Fixed
 
 * Hide the exit module ([#153](https://github.com/i-VRESSE/workflow-builder/issues/153))
 
-
 ## @i-vresse/wb-core 2.0.1 - 2024-03-25
 
 ### Changed