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simple.html
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simple.html
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<!DOCTYPE html><html lang="en"><head>
<meta charset="utf-8">
<meta name="viewport" content="width=device-width, initial-scale=1, maximum-scale=1">
<meta content="text/html; charset=utf-8" http-equiv="Content-Type">
<meta name="description" content="iCn3D Structure Viewer">
<meta name="keywords" content="NCBI, Structure, JavaScript, iCn3D, 3D, Viewer, WebGL, three.js, sequence, chemical">
<meta name="robots" content="index,follow,noarchive">
<meta name="ncbi_app" content="structure">
<meta name="ncbi_pdid" content="icn3d">
<meta name="ncbi_page" content="simple">
<meta name="ncbi_pinger_xml_http_request_override" content="false"/>
<title>iCn3D: Web-based 3D Structure Viewer</title>
<script type="text/javascript">
window.ncbi_startTime = new Date();
</script>
</head>
<body>
<div id="div0"></div>
<link rel="stylesheet" href="lib/jquery-ui-1.13.2.min.css">
<link rel="stylesheet" href="icn3d_simple_ui_2.24.5.css">
<script src="lib/jquery-3.5.0.min.js"></script>
<script src="lib/jquery-ui-1.13.2.min.js"></script>
<script src="lib/three_0.137.0.min.js"></script>
<script src="icn3d_simple_ui_2.24.5.min.js"></script>
<script type="text/javascript">
// separating the GET parameters from the current URL
if(document.URL.indexOf("?") === -1) {
alert("Please include '?pdbid=1GPK,2POR,...' in your url");
}
var getParams = document.URL.split("?");
// transforming the GET parameters into a dictionnary
var search = getParams[getParams.length - 1];
//var params = JSON.parse('{"' + decodeURIComponent(search).replace(/"/g, '\\"').replace(/&/g, '","').replace(/=/g,'":"') + '"}');
var params = {};
var decodeSearch = decodeURIComponent(search);
var hashes = decodeSearch.split('&');
for (var i = 0; i < hashes.length; i++) {
hash = hashes[i].split('=');
params[hash[0].trim()] = (hash[1] !== undefined) ? hash[1].trim() : undefined;
}
// for mmdb structures, pass the parameters after the first "&" sign
var inpara = "";
var ampPos = document.URL.indexOf("?");
if(ampPos !== -1) {
inpara = "&" + document.URL.substr(ampPos + 1);
}
var gi = params.gi;
var mmdbid = params.mmdbid;
var mmtfid = params.mmtfid;
var pdbid = params.pdbid;
var cid = params.cid;
var mmcifid = params.mmcifid;
var urlname = params.url;
var urltype = (params.type === undefined) ? 'pdb' : params.type;
var align = params.align;
var term = params.term;
var width = params.width;
var height = params.height;
if(width === undefined) width = '100%';
if(height === undefined) height = '100%';
var resize = params.resize;
if(resize === undefined || resize == 'true' || resize == '1') {
resize = true;
}
else if(resize == 'false' || resize == '0') {
resize = false;
}
var showmenu = params.showmenu;
if(showmenu === undefined || showmenu == 'true' || showmenu == '1') {
showmenu = true;
}
else if(showmenu == 'false' || showmenu == '0') {
showmenu = false;
}
var showtitle = params.showtitle;
if(showtitle === undefined || showtitle == 'true' || showtitle == '1') {
showtitle = true;
}
else if(showtitle == 'false' || showtitle == '0') {
showtitle = false;
}
var rotate = params.rotate;
if(rotate === undefined) {
rotate = 'right';
}
$( document ).ready(function() {
function setupViewer(idName, idValue) {
var maxStructure = 5; // show max 5 structures
var idArray = idValue.replace(/\s/g, '').split(',');
if(idArray.length > 1) {
//resize = false;
if(width.indexOf('%') != -1) {
width = 400;
height = 400;
}
}
var options = {};
//Options are available at: https://www.ncbi.nlm.nih.gov/Structure/icn3d/icn3d.html#DisplayOptions
//options['proteins'] = 'sphere';
for(var i = 0, il = idArray.length; i < il && i < maxStructure; ++i) {
var cfg = {
divid: 'div' + i,
inpara: inpara,
width: width,
height: height,
resize: resize,
rotate: rotate,
showmenu: showmenu,
showtitle: showtitle
};
cfg[idName] = idArray[i];
if(Object.keys(options).length > 0) cfg['options'] = options;
var icn3dui = new iCn3DUI(cfg);
icn3dui.show3DStructure();
}
}
if(mmtfid !== undefined) setupViewer('mmtfid', mmtfid);
if(pdbid !== undefined) setupViewer('pdbid', pdbid);
if(cid !== undefined) setupViewer('cid', cid);
if(mmcifid !== undefined) setupViewer('mmcifid', mmcifid);
if(mmdbid !== undefined) setupViewer('mmdbid', mmdbid);
if(gi !== undefined) setupViewer('gi', gi);
if(term !== undefined) setupViewer('term', term);
if(urlname !== undefined) {
urlname = decodeURIComponent(urlname);
setupViewer('url', urltype + '|' + urlname);
}
// e.g., align=103701,1,4,68563,1,167 [mmdbid1,biounit,molecule,mmdbid2,biounit,molecule]
if(align !== undefined) {
var cfg = {
divid: 'div0',
inpara: inpara,
width: width,
height: height,
resize: resize,
rotate: rotate,
align: align,
showmenu: showmenu,
showtitle: showtitle
};
var icn3dui = new iCn3DUI(cfg);
icn3dui.show3DStructure();
}
}); // document ready
</script>
<!-- log & Google Analytics -->
<script type="text/javascript" src="https://www.ncbi.nlm.nih.gov/core/pinger/pinger.js"></script>
</body>
</html>