You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
Hello,
I am using cellxgene VIP for plotting heatmap for gene expressions for different annotations loaded. I get the following error while selecting Complex heatmap
ERROR @server: Traceback (most recent call last): subprocess.CalledProcessError: Command '/opt/conda/envs/VIP/lib/python3.8/site-packages/server/app/complexHeatmap.R /tmp/HEAT1653565712.456287.csv IL3RA,FCGR2B,FCGR3B Expression False 6 8 Reds png 11 150 fontsize=4,col=\'black\',fontface=\'plain\' fontsize=4 fontsize=6 T Yes returned non-zero exit status 1.
However with seaborn it works perfectly fine and I could generate the heatmap.
Also when I set Gene as radio button to Row, it still plots them across column. Refer the image below for this issue.
I have deployed the application using docker.
Can you please help me out?
The text was updated successfully, but these errors were encountered:
Hello,
I am using cellxgene VIP for plotting heatmap for gene expressions for different annotations loaded. I get the following error while selecting
Complex heatmap
ERROR @server: Traceback (most recent call last): subprocess.CalledProcessError: Command '/opt/conda/envs/VIP/lib/python3.8/site-packages/server/app/complexHeatmap.R /tmp/HEAT1653565712.456287.csv IL3RA,FCGR2B,FCGR3B Expression False 6 8 Reds png 11 150 fontsize=4,col=\'black\',fontface=\'plain\' fontsize=4 fontsize=6 T Yes returned non-zero exit status 1.
However with seaborn it works perfectly fine and I could generate the heatmap.
Also when I set
Gene as
radio button toRow
, it still plots them across column. Refer the image below for this issue.I have deployed the application using
docker
.Can you please help me out?
The text was updated successfully, but these errors were encountered: