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switch to ScatterGL method from Bqplot #11

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cornhundred opened this issue Feb 13, 2020 · 0 comments
Open

switch to ScatterGL method from Bqplot #11

cornhundred opened this issue Feb 13, 2020 · 0 comments

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@cornhundred
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cornhundred commented Feb 13, 2020

We will try to switch the location based plotting to ScatterGL which uses WebGL to dynamically visualize lots of scatterplot data points.

  • allow pan/zoom
  • allow lasso selection
  • UMAP
    • RNA-velocity arrows
    • have different embeddings saved (e.g. ADT/GEX based embeddings)
  • Overlay tissue image underneath (if possible, may require changes)
  • Scatter -> Heatmap communication
    • highlight subset of columns

Based on the examples, it seems like this is not too difficult to set up.

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