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This should describe various random models of Boolean networks that we are considering.
The basis are N-K networks. However, we can probably just fix K=2 from the beginning, as this is where the critical transition occurs.
However, we need to differentiate between networks with constant in-degree and exponential/Poisson in-degree.
The second aspect is the considered update functions. The "baseline" are completely random functions. However, we would like to also test something more biologically realistic like locally-monotonic functions. Since these are hard to generate randomly, we might want to consider something like threshold old nested-canalising functions.
The text was updated successfully, but these errors were encountered:
See #55 for context.
This should describe various random models of Boolean networks that we are considering.
The basis are N-K networks. However, we can probably just fix K=2 from the beginning, as this is where the critical transition occurs.
However, we need to differentiate between networks with constant in-degree and exponential/Poisson in-degree.
The second aspect is the considered update functions. The "baseline" are completely random functions. However, we would like to also test something more biologically realistic like locally-monotonic functions. Since these are hard to generate randomly, we might want to consider something like threshold old nested-canalising functions.
The text was updated successfully, but these errors were encountered: