3dout.mdl

/******************************************************/
/* A simple model of a single AZ at the calyx of Held */
/*                                                    */
/* 3D output for DREAMM                               */
/* This assumes that a directory dx/ exists where     */
/* the results will be stored.                        */
/*                                                    */
/* Matthias Hennig                                    */
/* mhennig@inf.ed.ac.uk                               */
/******************************************************/



VIZ_DATA_OUTPUT {

  MODE = DX
/*  VOXEL_IMAGE_MODE = YES */

  ITERATION_FRAME_DATA { 
    SURFACE_POSITIONS = [0]
    SURFACE_STATES = [0]
    EFFECTOR_POSITIONS = [0]
    EFFECTOR_STATES = [[0 TO 1000 STEP 1]]
    MOLECULE_POSITIONS = [[0 TO 1000 STEP 1]]
  } 

  MOLECULE_FILE_PREFIX = "dx/glu"

  OBJECT_FILE_PREFIXES {
    coh = "dx/cleft"
  }

  STATE_VALUES {
    AMPAR.O1 = 1
    AMPAR.O2 = 2
    AMPAR.O3 = 3
    AMPAR.O4 = 4
    AMPAR.C0 = 5
    AMPAR.C1 = 6
    AMPAR.C2 = 7
    AMPAR.C3 = 8
    AMPAR.C4 = 9
    AMPAR.D1 = 10
    AMPAR.D2 = 11
    AMPAR.D3 = 12
    AMPAR.D4 = 13
    Glu = 14
  }

}