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Don't use threads for CI tests Release #308: Commit fdc6bd2 pushed by jeromekelleher
August 4, 2023 12:29 51s better-divmat-site-mode
better-divmat-site-mode
August 4, 2023 12:29 51s
Just test site mode Release #307: Commit 93bd89f pushed by jeromekelleher
August 4, 2023 12:24 38s better-divmat-site-mode
better-divmat-site-mode
August 4, 2023 12:24 38s
DEBUG Disable site mode Release #306: Commit 2093129 pushed by jeromekelleher
August 4, 2023 12:07 46s better-divmat-site-mode
better-divmat-site-mode
August 4, 2023 12:07 46s
DEBUG Try turning off threads Release #305: Commit 67544dc pushed by jeromekelleher
August 4, 2023 09:51 42s better-divmat-site-mode
better-divmat-site-mode
August 4, 2023 09:51 42s
Site divmat version with O(n^2) per mutation Release #304: Commit bba57c1 pushed by jeromekelleher
August 4, 2023 09:11 52s better-divmat-site-mode
better-divmat-site-mode
August 4, 2023 09:11 52s
Improved C algorithm Release #303: Commit 73dc0cf pushed by jeromekelleher
August 4, 2023 08:28 53s better-divmat-site-mode
better-divmat-site-mode
August 4, 2023 08:28 53s
Update lshmm requirement to 0.0.5 Release #302: Commit 408d7e3 pushed by jeromekelleher
August 3, 2023 12:10 43s ls-forward-native
ls-forward-native
August 3, 2023 12:10 43s
Update lshmm requirement to 0.0.5 Release #301: Commit 90a578a pushed by jeromekelleher
August 3, 2023 11:01 55s ls-forward-native
ls-forward-native
August 3, 2023 11:01 55s
Update lshmm requirement to 0.0.5 Release #300: Commit f7269b4 pushed by jeromekelleher
August 3, 2023 10:34 1m 13s ls-forward-native
ls-forward-native
August 3, 2023 10:34 1m 13s
Site divmat version with O(n^2) per mutation Release #299: Commit 1dfb7d7 pushed by jeromekelleher
July 19, 2023 05:26 39s incremental-mutation-counts
incremental-mutation-counts
July 19, 2023 05:26 39s
Update lshmm requirement to 0.0.5 Release #298: Commit 3ac3bbf pushed by jeromekelleher
July 18, 2023 14:23 37s ls-forward-native
ls-forward-native
July 18, 2023 14:23 37s
Backwards algorithm in LSHMM Release #297: Commit 2fdc7c6 pushed by jeromekelleher
July 18, 2023 13:01 42s ls-forward-native
ls-forward-native
July 18, 2023 13:01 42s
Convert LS HMM code to use tree_position_t Release #296: Commit 2c264be pushed by jeromekelleher
July 18, 2023 11:51 45s incremental-trees
incremental-trees
July 18, 2023 11:51 45s
Fixup numeric comparisons Release #295: Commit dca554e pushed by jeromekelleher
July 16, 2023 16:38 41s ls-forward-native
ls-forward-native
July 16, 2023 16:38 41s
Fix tests Release #294: Commit ea2c822 pushed by jeromekelleher
July 15, 2023 16:01 37s ls-forward-native
ls-forward-native
July 15, 2023 16:01 37s
Some WIP for C Release #293: Commit 8a023ee pushed by jeromekelleher
July 14, 2023 15:59 1m 19s ls-forward-native
ls-forward-native
July 14, 2023 15:59 1m 19s
Remove the mirrored version of backwards alg Release #292: Commit 5c6c59f pushed by jeromekelleher
July 14, 2023 14:00 39s ls-forward-native
ls-forward-native
July 14, 2023 14:00 39s
Add forward matrix to tests Release #291: Commit 89e9e8b pushed by jeromekelleher
July 14, 2023 10:28 51s ls-forward-native
ls-forward-native
July 14, 2023 10:28 51s
Refactored code for emission probability Release #290: Commit 040ac59 pushed by jeromekelleher
July 13, 2023 15:58 41s ls-forward-native
ls-forward-native
July 13, 2023 15:58 41s
Convert LS HMM code to use tree_position_t Release #289: Commit 3843e87 pushed by jeromekelleher
July 13, 2023 14:41 1m 5s incremental-trees
incremental-trees
July 13, 2023 14:41 1m 5s
Convert LS HMM code to use tree_position_t Release #288: Commit 3cfab54 pushed by jeromekelleher
July 12, 2023 15:40 38s incremental-trees
incremental-trees
July 12, 2023 15:40 38s
Convert LS HMM code to use tree_position_t Release #287: Commit 158ed1a pushed by jeromekelleher
July 12, 2023 15:30 1m 1s incremental-trees
incremental-trees
July 12, 2023 15:30 1m 1s
Tweaks Release #286: Commit 80649a6 pushed by jeromekelleher
July 11, 2023 16:07 51s incremental-trees
incremental-trees
July 11, 2023 16:07 51s
Divergence matrix tree-by-tree algorithms Release #285: Commit f84f5e3 pushed by jeromekelleher
July 11, 2023 09:19 40s divmat-tree-by-tree
divmat-tree-by-tree
July 11, 2023 09:19 40s
Divergence matrix tree-by-tree algorithms Release #284: Commit 21be777 pushed by jeromekelleher
July 11, 2023 08:45 38s divmat-tree-by-tree
divmat-tree-by-tree
July 11, 2023 08:45 38s