From c53b76e2f81a54952ccb7db3db76cb52a578a4f7 Mon Sep 17 00:00:00 2001 From: Stefan Janssen Date: Fri, 12 Sep 2025 14:33:49 +0200 Subject: [PATCH] switch to https file transfer for qp-deblur --- Images/qp-deblur/qp-deblur.dockerfile | 4 ++-- compose.yaml | 2 +- 2 files changed, 3 insertions(+), 3 deletions(-) diff --git a/Images/qp-deblur/qp-deblur.dockerfile b/Images/qp-deblur/qp-deblur.dockerfile index 067fe51..40b5ba4 100644 --- a/Images/qp-deblur/qp-deblur.dockerfile +++ b/Images/qp-deblur/qp-deblur.dockerfile @@ -1,4 +1,4 @@ -# VERSION: 2025.08.22 +# VERSION: 2025.09.12 # ========================== # Stage 1: Build wheels @@ -130,7 +130,7 @@ RUN cd qiita_client && pip install . RUN mkdir -p /qiita_server_certificates/ COPY qiita_server_certificates/*_server.* /qiita_server_certificates/ -RUN /usr/local/bin/configure_deblur --env-script "true" --server-cert `find /qiita_server_certificates/ -name "*_server.crt" -type f` filesystem +RUN /usr/local/bin/configure_deblur --env-script "true" --server-cert `find /qiita_server_certificates/ -name "*_server.crt" -type f` https RUN sed -i -E "s/^START_SCRIPT = .+/START_SCRIPT = python \/start_plugin.py qp-deblur/" /unshared_plugins/*.conf # remove conda command from tigger.py diff --git a/compose.yaml b/compose.yaml index 53a4b4d..bffee2b 100644 --- a/compose.yaml +++ b/compose.yaml @@ -281,7 +281,7 @@ services: # tty: true restart: no volumes: - - qiita-data:/qiita_data + #- qiita-data:/qiita_data - ./references/qiita_server_certificates:/qiita_server_certificates - ./references/qp-deblur:/opt/conda/envs/deblur/share/fragment-insertion/ref #- ./src/qtp-biom:/qtp-biom:U