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DESCRIPTION
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Package: SpectraTutorials
Title: Mass Spectrometry Data Analysis with Spectra
Version: 1.0.0
Authors@R: c(
person(given = "Johannes", family = "Rainer",
email = "[email protected]",
role = c("aut", "cre"),
comment = c(ORCID = "0000-0002-6977-7147")),
person(given = "Michael", family = "Witting",
email = "[email protected]",
role = c("aut"),
comment = c(ORCID = "0000-0002-1462-4426")),
person(given = "Laurent", family = "Gatto",
email = "[email protected]",
role = c("aut"),
comment = c(ORCID = "0000-0002-1520-2268")),
person(given = "Sebastian", family = "Gibb",
email = "[email protected]",
role = c("aut"),
comment = c(ORCID = "0000-0001-7406-4443")),
person(given = "Philippine", family = "Louail",
email = "[email protected]",
role = c("ctb")))
Description: These workshops and tutorials provide use cases and examples for
mass spectrometry data handling and analysis using the Spectra Bioconductor
package and how these can be included into other R-based analyis workflows.
License: Artistic-2.0
Encoding: UTF-8
LazyData: false
Roxygen: list(markdown = TRUE)
Depends:
R (>= 4.1)
Imports:
curl
Suggests:
Spectra (>= 1.14.0),
Biobase,
BiocStyle,
knitr,
rmarkdown,
pkgdown,
mzR,
RMariaDB,
pheatmap,
MsBackendMgf (>= 1.12.0),
MsBackendMassbank (>= 1.10.0),
pander,
CompoundDb (>= 1.7.0),
xcms,
msdata,
MetaboAnnotation (>= 1.8.1),
microbenchmark,
MsBackendSql (>= 1.4.0),
RSQLite,
AnnotationHub
URL: https://jorainer.github.io/SpectraTutorials/
BugReports: https://github.com/jorainer/SpectraTutorials/issues/new
VignetteBuilder: knitr
RoxygenNote: 7.2.1
DockerImage: jorainer/spectra_tutorials:RELEASE_3_19