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Install required package versions with R version 4.3 #20

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jorainer opened this issue Feb 26, 2024 · 0 comments
Open

Install required package versions with R version 4.3 #20

jorainer opened this issue Feb 26, 2024 · 0 comments

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@jorainer
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The R packages used in this workshop/tutorial are from the Bioconductor 3.19 developmental version, which requires R version 4.4 (which is, at the time, the devel version). The required developmental packages could however still be installed from github using the code below:

install.packages("BiocManager")
BiocManager::install("RforMassSpectrometry/ProtGenerics")
BiocManager::install("RforMassSpectrometry/MsCoreUtils")
BiocManager::install("RforMassSpectrometry/MetaboCoreUtils")
BiocManager::install("RforMassSpectrometry/Spectra")
BiocManager::install("RforMassSpectrometry/MsExperiment")
BiocManager::install("RforMassSpectrometry/MetaboAnnotation")
BiocManager::install("sneumann/xcms")

These packages will become the release packages of the upcoming Bioconductor release 3.19 (presumably April 2024).

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