Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Exclude mRNA features in bacterial TBL exports #56

Open
jorvis opened this issue Jun 25, 2018 · 0 comments
Open

Exclude mRNA features in bacterial TBL exports #56

jorvis opened this issue Jun 25, 2018 · 0 comments

Comments

@jorvis
Copy link
Owner

jorvis commented Jun 25, 2018

From Suvvi:

Just a reminder that mRNA feature needs to be avoided in tbl while converting gff or genbank file into tbl file.

The genome that I submitted with mRNA feature has been sent back as it had mRNA… pasting the error here (just FYI),

“FATAL: DISC_BACTERIA_SHOULD_NOT_HAVE_MRNA:5 bacterial sequences have mRNA features

FATAL: DiscRep_ALL:DISC_BACTERIA_SHOULD_NOT_HAVE_MRNA::5 bacterial sequences have mRNA features

/tmp/tmp.zCDmHD4k9r:tig00000001_edited (length 4883137)
/tmp/tmp.zCDmHD4k9r:tig00000064_edited (length 1234209)
/tmp/tmp.zCDmHD4k9r:tig00000082_edited (length 415988)
/tmp/tmp.zCDmHD4k9r:tig00000065_edited (length 771583)
/tmp/tmp.zCDmHD4k9r:tig00000066_edited (length 630306)”
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
1 participant
@jorvis