Compute brain gm/wm mask on subject's VBM data #3108

	name: Build and preview docs

	on:
	push:
	branches-ignore:
	- 'main'
	tags-ignore:
	- v*
	pull_request:
	types:
	- opened
	- reopened
	- synchronize
	- closed

	concurrency: preview-${{ github.ref }}

	jobs:
	build-docs:
	runs-on: ubuntu-latest
	# Use custom docs CI image
	container: ghcr.io/juaml/junifer-docs:main
	steps:
	- name: Check ANTs
	run: \|
	echo "Using ANTs : $(antsRegistration --version)"
	- name: Install system dependencies
	run: \|
	# actions/checkout fails to identify Git as it's not in the CI image
	apt-get -qq update && \
	apt-get -qq install -y \
	git \
	git-annex \
	make \
	jq
	# Copy xfms directory
	mkdir -p $HOME/junifer/data/xfms && \
	cp -ar /root/junifer/data/xfms/. $HOME/junifer/data/xfms/
	- name: Checkout source
	uses: actions/checkout@v4
	with:
	fetch-depth: 0
	submodules: true
	- name: Set up Python
	uses: actions/setup-python@v5
	with:
	python-version: "3.x"
	- name: Install Python dependencies
	run: \|
	python -m pip install --upgrade pip setuptools wheel
	python -m pip install -e ".[docs,neurokit2]"
	- name: Configure Git for DataLad
	run: \|
	git config --global user.email "[email protected]"
	git config --global user.name "GitHub Runner"
	- name: Test build docs
	run: \|
	BUILDDIR=_build/main make -C docs/ local
	- name: Deploy preview
	if: github.event_name == 'pull_request'
	uses: rossjrw/pr-preview-action@v1
	with:
	source-dir: docs/_build/main

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