diff --git a/src/requirements-dev.txt b/src/requirements-dev.txt
index 6c046f1f9d..db40eda58b 100644
--- a/src/requirements-dev.txt
+++ b/src/requirements-dev.txt
@@ -1,7 +1,7 @@
-coverage==7.6.2
-pytest==8.3.3
-pytest-cov==5.0.0
+coverage==7.6.10
+pytest==8.3.4
+pytest-cov==6.0.0
 pytest-recording==0.13.2
 requests-mock==1.12.1
-ruff==0.6.9
-vcrpy==6.0.2
+ruff==0.8.4
+vcrpy==7.0.0
diff --git a/src/requirements.txt b/src/requirements.txt
index 348c2e39ef..1b44f73341 100644
--- a/src/requirements.txt
+++ b/src/requirements.txt
@@ -1,52 +1,52 @@
 appdirs==1.4.4
 beautifulsoup4==4.12.3
 biopython==1.84
-bokeh==3.6.0
-certifi==2024.8.30
+bokeh==3.6.2
+certifi==2024.12.14
 chardet==5.2.0
 chart_studio==1.1.0
-cryptography==43.0.1
+cryptography==44.0.0
 decorator==5.1.1
 ete3==3.1.3
 html5lib==1.1
 idna==3.10
 jsonschema==4.23.0
 markdown==3.7
-markupsafe==3.0.1
+markupsafe==3.0.2
 ndg-httpsclient==0.5.1
-networkx==3.4
-numpy==2.1.2
+networkx==3.4.2
+numpy==2.2.1
 pexpect==4.9.0
 pickleshare==0.7.5
-pillow==10.4.0
+pillow==11.0.0
 plotly==5.24.1
 pyasn1==0.6.1
-pycurl==7.45.3
+pycurl==7.45.4
 pygments==2.18.0
-pyopenssl==24.2.1
-python-daemon==3.0.1
+pyopenssl==24.3.0
+python-daemon==3.1.2
 python-dateutil==2.9.0.post0
 qgrid==1.3.1
 rsa==4.9
 scipy==1.14.1
 seaborn==0.13.2
-setuptools==75.1.0
-six==1.16.0
+setuptools==75.6.0
+six==1.17.0
 sympy==1.13.3
 terminado==0.18.1
-wordcloud==1.9.3
+wordcloud==1.9.4
 
 # Narrative/Jupyter requirements
 clustergrammer2==0.18.0
-ipython==8.28.2
+ipython==8.31.0
 ipywidgets==8.1.5
-jinja2==3.1.4
+jinja2==3.1.5
 # N.b. notebook version must stay under 7
 notebook==6.5.7
 pandas==2.2.3
 pymongo==4.10.1
 pyyaml==6.0.2
 requests==2.32.3
-scikit-learn==1.5.2
+scikit-learn==1.6.0
 statsmodels==0.14.4
-tornado==6.4.1
+tornado==6.4.2