forked from gyorilab/protmapper
-
Notifications
You must be signed in to change notification settings - Fork 0
/
setup.py
executable file
·54 lines (45 loc) · 1.87 KB
/
setup.py
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
import re
from os import path
from setuptools import setup, find_packages
here = path.abspath(path.dirname(__file__))
with open(path.join(here, 'README.md'), 'r', encoding='utf-8') as fh:
long_description = fh.read()
with open(path.join(here, 'protmapper', '__init__.py'), 'r') as fh:
for line in fh.readlines():
match = re.match(r'__version__ = \'(.+)\'', line)
if match:
version = match.groups()[0]
break
else:
raise ValueError('Could not get version from protmapper/__init__.py')
def main():
install_list = ['requests', 'rdflib', 'boto3', 'pystow>=0.1.0']
setup(name='protmapper',
version=version,
description='Map protein sites to human reference sequence.',
long_description=long_description,
long_description_content_type='text/markdown',
author='John A. Bachman',
author_email='[email protected]',
url='https://github.com/indralab/protmapper',
classifiers=[
'Development Status :: 4 - Beta',
'Environment :: Console',
'Intended Audience :: Science/Research',
'License :: OSI Approved :: BSD License',
'Operating System :: OS Independent',
'Programming Language :: Python :: 3',
'Topic :: Scientific/Engineering :: Bio-Informatics',
],
keywords=['protein', 'proteomics', 'sequence', 'alignment',
'assembly', 'post-translational', 'modification'],
packages=find_packages(),
install_requires=install_list,
tests_require=['nose'],
extras_require={'rest_api': ['flask', 'flask_cors']},
include_package_data=True,
entry_points={'console_scripts':
['protmapper = protmapper.cli:main']},
)
if __name__ == '__main__':
main()