requirements.txt

# This file may be used to create an environment using:
# $ conda create --name <env> --file <this file>
# platform: linux-64
_libgcc_mutex=0.1=conda_forge
_openmp_mutex=4.5=1_llvm
_r-mutex=1.0.1=anacondar_1
aioeasywebdav=2.4.0=py37hc8dfbb8_1001
aiohttp=3.7.3=py37h27cfd23_1
amply=0.1.4=py_0
ansi2html=1.6.0=pypi_0
anyio=3.3.1=pypi_0
appdirs=1.4.4=py_0
argon2-cffi=20.1.0=py37h27cfd23_1
arrow=1.2.1=pypi_0
asciitree=0.3.3=py_2
async-timeout=3.0.1=py37h06a4308_0
async_generator=1.10=py37h28b3542_0
attmap=0.12.11=py_0
attrs=20.3.0=pyhd3eb1b0_0
backcall=0.2.0=pyhd3eb1b0_0
bcftools=1.12=h3f113a9_0
bcrypt=3.2.0=py37h7b6447c_0
beautifulsoup4=4.10.0=pypi_0
bedtools=2.30.0=hc088bd4_0
bfg=1.14.0=ha770c72_1
binutils_impl_linux-64=2.36.1=h193b22a_2
binutils_linux-64=2.36=hf3e587d_1
bioconductor-biocgenerics=0.32.0=r36_0
bioconductor-genomeinfodb=1.22.0=r36_0
bioconductor-genomeinfodbdata=1.2.2=r36_0
bioconductor-genomicranges=1.38.0=r36h516909a_0
bioconductor-ggtree=2.0.0=r36_0
bioconductor-iranges=2.20.0=r36h516909a_0
bioconductor-s4vectors=0.24.0=r36h516909a_0
bioconductor-treeio=1.10.0=r36_0
bioconductor-xvector=0.26.0=r36h516909a_0
bioconductor-zlibbioc=1.32.0=r36h516909a_0
biopython=1.78=py37h7b6447c_0
bleach=3.3.0=pyhd3eb1b0_0
boto3=1.9.66=py37_0
botocore=1.12.67=py37_0
brotli=1.0.9=pypi_0
bwidget=1.9.14=ha770c72_0
bzip2=1.0.8=h7b6447c_0
c-ares=1.17.1=h7f98852_1
ca-certificates=2021.10.26=h06a4308_2
cachetools=4.2.1=pyhd3eb1b0_0
cairo=1.16.0=h7979940_1007
certifi=2021.10.8=py37h06a4308_0
cffi=1.14.4=py37h261ae71_0
chardet=3.0.4=py37h06a4308_1003
click=7.1.2=pypi_0
coincbc=2.10.5=hcee13e7_1
colorama=0.4.4=pypi_0
commonmark=0.9.1=pypi_0
conda=4.9.2=py37h06a4308_0
conda-merge=0.2.0=pypi_0
conda-package-handling=1.7.2=py37h03888b9_0
configargparse=1.2.3=py_0
connection_pool=0.0.3=pyhd3deb0d_0
cryptography=3.3.1=py37h3c74f83_0
cunit=2.1.3=h9c3ff4c_1002
curl=7.75.0=h979ede3_0
custom-inherit=2.4.0=pypi_0
cycler=0.10.0=py_2
dash=1.21.0=pypi_0
dash-core-components=1.17.1=pypi_0
dash-html-components=1.1.4=pypi_0
dash-table=4.12.0=pypi_0
datrie=0.8.2=py37h27cfd23_0
dbus=1.13.18=hb2f20db_0
decorator=4.4.2=pyhd3eb1b0_0
defusedxml=0.7.1=pyhd3eb1b0_0
demes=0.2.0=pypi_0
dendropy=4.5.1=pypi_0
docutils=0.15=pypi_0
dropbox=10.10.0=py37h06a4308_0
entrypoints=0.3=py37_0
execnet=1.9.0=pypi_0
expat=2.2.10=he6710b0_2
fasteners=0.16=pyhd3eb1b0_0
fftw=3.3.9=h27cfd23_1
filechunkio=1.8=py_2
filelock=3.3.1=pyhd3eb1b0_1
flask=2.0.1=pypi_0
flask-compress=1.10.1=pypi_0
font-ttf-dejavu-sans-mono=2.37=h6964260_0
font-ttf-inconsolata=2.001=hcb22688_0
font-ttf-source-code-pro=2.030=h7457263_0
font-ttf-ubuntu=0.83=h8b1ccd4_0
fontconfig=2.13.1=hba837de_1004
fonts-conda-forge=1=0
freetype=2.10.4=h5ab3b9f_0
fribidi=1.0.10=h7b6447c_0
ftputil=4.0.0=py_0
future=0.18.2=pypi_0
gcc=9.4.0=h192d537_1
gcc_impl_linux-64=9.4.0=h03d3576_9
gcc_linux-64=9.4.0=h391b98a_1
gdk-pixbuf=2.42.2=h0c95a7a_2
gettext=0.19.8.1=h9b4dc7a_1
gfortran_impl_linux-64=9.4.0=h0003116_9
gfortran_linux-64=9.4.0=hf0ab688_1
ghostscript=9.18=1
giflib=5.2.1=h7b6447c_0
git-lfs=2.13.3=h06a4308_0
gitdb=4.0.5=py_0
gitpython=3.1.12=pyhd3eb1b0_1
glib=2.66.4=hc4f0c31_2
glib-tools=2.66.4=hc4f0c31_2
google-api-core=1.22.2=py37_0
google-api-python-client=1.12.8=pyhd3deb0d_0
google-auth=1.24.0=pyhd3eb1b0_0
google-auth-httplib2=0.0.4=pyh9f0ad1d_0
google-cloud-core=1.5.0=pyhd3eb1b0_0
google-cloud-storage=1.35.0=pyhd3eb1b0_0
google-crc32c=1.1.1=py37h27cfd23_0
google-resumable-media=1.2.0=pyhd3eb1b0_1
googleapis-common-protos=1.52.0=py37_0
graphite2=1.3.14=h23475e2_0
graphviz=2.42.3=h0511662_0
greenlet=1.1.1=pypi_0
gsl=2.6=he838d99_2
gst-plugins-base=1.14.5=h0935bb2_2
gstreamer=1.18.3=h3560a44_0
gxx_impl_linux-64=9.4.0=h03d3576_9
gxx_linux-64=9.4.0=h0316aca_1
harfbuzz=2.7.4=h5cf4720_0
htslib=1.12=hd3b49d5_0
httplib2=0.18.1=pyh9f0ad1d_0
hypothesis=6.22.0=pypi_0
icu=68.1=h2531618_0
idna=2.10=pyhd3eb1b0_0
imagemagick=7.0.10_28=pl526h201ca68_0
imgcat=0.5.0=pypi_0
importlib-metadata=2.0.0=py_1
importlib-resources=5.2.2=pypi_0
importlib_metadata=2.0.0=1
iniconfig=1.1.1=pyhd3eb1b0_0
ipykernel=5.3.4=py37h5ca1d4c_0
ipython=7.20.0=py37h888b3d9_0
ipython_genutils=0.2.0=pyhd3eb1b0_1
ipywidgets=7.6.3=pyhd3eb1b0_1
itables=0.3.0=pypi_0
itsdangerous=2.0.1=pypi_0
jbig=2.1=hdba287a_0
jedi=0.18.0=py37h06a4308_1
jinja2=3.0.1=pypi_0
jmespath=0.10.0=py_0
jpeg=9d=h36c2ea0_0
jsonschema=3.2.0=py_2
jupyter-book=0.11.3=pypi_0
jupyter-cache=0.4.3=pypi_0
jupyter-dash=0.4.0=pypi_0
jupyter-server=1.11.0=pypi_0
jupyter-server-mathjax=0.2.3=pypi_0
jupyter-sphinx=0.3.2=pypi_0
jupyter_client=6.1.12=pyhd3eb1b0_0
jupyter_core=4.7.1=py37h06a4308_0
jupyterlab_pygments=0.1.2=py_0
jupyterlab_widgets=1.0.0=pyhd3eb1b0_1
jupytext=1.10.3=pypi_0
kernel-driver=0.0.6=pypi_0
kernel-headers_linux-64=2.6.32=h77966d4_13
kiwisolver=1.3.1=py37h2527ec5_1
krb5=1.17.2=h926e7f8_0
latexcodec=2.0.1=pypi_0
lcms2=2.11=hcbb858e_1
ld_impl_linux-64=2.36.1=hea4e1c9_2
libarchive=3.5.1=h899b81a_0
libblas=3.9.0=8_openblas
libcblas=3.9.0=8_openblas
libclang=11.1.0=default_ha53f305_0
libcrc32c=1.1.1=he6710b0_2
libcurl=7.75.0=hc4aaa36_0
libdeflate=1.7=h27cfd23_5
libedit=3.1.20191231=h14c3975_1
libev=4.33=h516909a_1
libevent=2.1.10=hcdb4288_3
libffi=3.3=he6710b0_2
libgcc=7.2.0=h69d50b8_2
libgcc-devel_linux-64=9.4.0=hd854feb_9
libgcc-ng=11.2.0=h1d223b6_8
libgfortran-ng=11.2.0=h69a702a_8
libgfortran5=11.2.0=h5c6108e_8
libglib=2.66.4=h748fe8e_2
libgomp=11.2.0=h1d223b6_8
libiconv=1.16=h516909a_0
liblapack=3.9.0=8_openblas
libllvm11=11.1.0=hf817b99_0
libnghttp2=1.43.0=h812cca2_0
libopenblas=0.3.12=pthreads_h4812303_1
libpng=1.6.37=hbc83047_0
libpq=12.3=hfd2b0eb_3
libprotobuf=3.13.0.1=hd408876_0
librsvg=2.50.3=hfa39831_0
libsanitizer=9.4.0=h79bfe98_9
libsodium=1.0.18=h7b6447c_0
libsolv=0.7.17=h780b84a_0
libssh2=1.9.0=h1ba5d50_1
libstdcxx-devel_linux-64=9.4.0=hd854feb_9
libstdcxx-ng=11.2.0=he4da1e4_8
libtiff=4.1.0=h2733197_1
libtool=2.4.6=h7b6447c_1005
libuuid=2.32.1=h7f98852_1000
libuv=1.42.0=h7f98852_0
libwebp=1.2.0=h89dd481_0
libwebp-base=1.2.0=h27cfd23_0
libxcb=1.14=h7b6447c_0
libxkbcommon=1.0.3=he3ba5ed_0
libxml2=2.9.10=h72842e0_3
linkify-it-py=1.0.1=pypi_0
llvm-openmp=11.0.1=h4bd325d_0
logmuse=0.2.6=pyh8c360ce_0
lz4-c=1.9.2=heb0550a_3
lzo=2.10=h7b6447c_2
make=4.3=hd18ef5c_1
mamba=0.7.10=py37h7f483ca_0
markdown-it-py=0.6.2=pypi_0
markupsafe=2.0.1=pypi_0
matplotlib=3.4.2=pypi_0
matplotlib-base=3.3.4=py37h62a2d02_0
mdit-py-plugins=0.2.6=pypi_0
memory_profiler=0.58.0=pyhd3eb1b0_0
mistune=0.8.4=py37h14c3975_1001
monotonic=1.5=py_0
more-itertools=8.6.0=pyhd3eb1b0_0
msgpack-python=1.0.2=py37h2527ec5_1
msprime=1.0.4=pypi_0
multidict=4.7.6=py37h7b6447c_1
multipledispatch=0.6.0=pypi_0
mypy=0.910=pypi_0
mypy-extensions=0.4.3=pypi_0
mysql-common=8.0.22=ha770c72_1
mysql-libs=8.0.22=h1fd7589_1
myst-nb=0.12.3=pypi_0
myst-parser=0.13.7=pypi_0
nbclient=0.5.3=pyhd3eb1b0_0
nbconvert=5.6.1=pypi_0
nbdime=3.1.0=pypi_0
nbformat=5.1.2=pyhd3eb1b0_1
nbterm=0.0.11=pypi_0
ncurses=6.2=he6710b0_1
nest-asyncio=1.5.1=pyhd3eb1b0_0
networkx=2.5=py_0
newick=1.3.0=pypi_0
ninja=1.10.2=pypi_0
nodejs=16.10.0=h92b4a50_0
notebook=6.4.0=py37h06a4308_0
nspr=4.30=h9c3ff4c_0
nss=3.63=hb5efdd6_0
numcodecs=0.7.3=py37hcd2ae1e_0
numpy=1.20.1=py37haa41c4c_0
oauth2client=4.1.3=py_0
olefile=0.46=pyh9f0ad1d_1
openjdk=10.0.2=h14c3975_1015
openjpeg=2.3.1=hf7af979_3
openssl=1.1.1l=h7f8727e_0
packaging=20.9=pyhd3eb1b0_0
pandas=1.2.1=py37ha9443f7_0
pandoc=2.14.2=h7f98852_0
pandocfilters=1.4.3=py37h06a4308_1
pango=1.42.4=h69149e4_5
parallel=20210222=ha770c72_0
paramiko=2.7.2=py_0
parso=0.8.1=pyhd3eb1b0_0
pcre=8.44=he6710b0_0
pcre2=10.36=h032f7d1_1
peppy=0.31.0=pyh9f0ad1d_0
perl=5.26.2=h14c3975_0
pexpect=4.8.0=py37_1
pickleshare=0.7.5=py37_1001
pillow=8.1.2=py37he98fc37_0
pip=20.3.3=py37h06a4308_0
pip-date=1.0.3=pypi_0
pivottablejs=0.9.0=py37h06a4308_0
pixman=0.40.0=h7b6447c_0
pkg-config=0.29.2=h1bed415_8
plotly=5.1.0=pypi_0
pluggy=0.13.1=py37_0
pprofile=2.1.0=pypi_0
prettytable=2.0.0=pyhd8ed1ab_0
prometheus_client=0.11.0=pyhd3eb1b0_0
prompt-toolkit=3.0.20=pyhd3eb1b0_0
protobuf=3.13.0.1=py37he6710b0_1
psutil=5.7.2=py37h7b6447c_0
ptyprocess=0.6.0=py37_0
pulp=2.3.1=py37hc8dfbb8_0
py=1.10.0=pyhd3eb1b0_0
pyasn1=0.4.8=py_0
pyasn1-modules=0.2.8=py_0
pybtex=0.24.0=pypi_0
pybtex-docutils=1.0.1=pypi_0
pycosat=0.6.3=py37h27cfd23_0
pycparser=2.20=py_2
pydata-sphinx-theme=0.6.3=pypi_0
pygments=2.7.4=pyhd3eb1b0_0
pygraphviz=1.7=py37h0b1d2a2_0
pynacl=1.4.0=py37h7b6447c_1
pyopenssl=20.0.1=pyhd3eb1b0_1
pyparsing=2.4.7=pyhd3eb1b0_0
pypng=0.0.21=pypi_0
pyqt=5.12.3=py37h89c1867_7
pyqt-impl=5.12.3=py37he336c9b_7
pyqt5-sip=4.19.18=py37hcd2ae1e_7
pyqtchart=5.12=py37he336c9b_7
pyqtwebengine=5.12.1=py37he336c9b_7
pyrsistent=0.17.3=py37h7b6447c_0
pysftp=0.2.9=py_1
pyslim=0.600=pypi_0
pysocks=1.7.1=py37_1
pytest=6.2.2=py37h06a4308_2
pytest-cov=2.12.1=pypi_0
pytest-forked=1.3.0=pypi_0
pytest-xdist=2.4.0=pypi_0
python=3.7.9=h7579374_0
python-dateutil=2.8.1=pyhd3eb1b0_0
python-irodsclient=0.8.2=py_0
python-xlib=0.31=pypi_0
python_abi=3.7=1_cp37m
pytz=2021.1=pyhd3eb1b0_0
pyyaml=5.4.1=py37h27cfd23_1
pyzmq=20.0.0=py37h2531618_1
qgrid=1.3.1=py37_0
qt=5.12.9=h9d6b050_2
r=3.6.0=r36_0
r-abind=1.4_5=r36h6115d3f_0
r-ape=5.5=r36h306847c_0
r-askpass=1.1=r36hcfec24a_2
r-assertthat=0.2.1=r36h6115d3f_0
r-backports=1.2.1=r36hcfec24a_0
r-base=3.6.3=hd23ff56_6
r-base64enc=0.1_3=r36h96ca727_4
r-biocmanager=1.30.15=r36hc72bb7e_0
r-bitops=1.0_7=r36hcfec24a_0
r-blob=1.2.1=r36h6115d3f_1
r-boot=1.3_28=r36hc72bb7e_0
r-brio=1.1.2=r36hcfec24a_0
r-broom=0.7.6=r36hc72bb7e_0
r-callr=3.7.0=r36hc72bb7e_0
r-car=3.0_10=r36h6115d3f_0
r-cardata=3.0_4=r36h6115d3f_0
r-cellranger=1.1.0=r36h6115d3f_0
r-class=7.3_19=r36hcfec24a_0
r-cli=2.5.0=r36hc72bb7e_0
r-clipr=0.7.1=r36h142f84f_0
r-cluster=2.1.2=r36h859d828_0
r-codetools=0.2_18=r36hc72bb7e_0
r-colorspace=2.0_1=r36hcfec24a_0
r-conquer=1.0.2=r36hed939d5_1
r-corrplot=0.88=r36hc72bb7e_0
r-cowplot=1.1.1=r36hc72bb7e_0
r-cpp11=0.2.7=r36hc72bb7e_0
r-crayon=1.4.1=r36hc72bb7e_0
r-crosstalk=1.1.1=r36hc72bb7e_0
r-curl=4.3.1=r36hcfec24a_0
r-data.table=1.14.0=r36hcfec24a_0
r-dbi=1.1.1=r36hc72bb7e_0
r-dbplyr=2.1.1=r36hc72bb7e_0
r-desc=1.3.0=r36hc72bb7e_0
r-diffobj=0.3.4=r36hcfec24a_0
r-digest=0.6.27=r36h03ef668_0
r-dplyr=1.0.6=r36h03ef668_1
r-dtplyr=1.1.0=r36hc72bb7e_0
r-ellipsis=0.3.2=r36hcfec24a_0
r-evaluate=0.14=r36h6115d3f_2
r-fansi=0.4.2=r36hcfec24a_0
r-farver=2.1.0=r36h03ef668_0
r-forcats=0.5.1=r36hc72bb7e_0
r-foreign=0.8_76=r36hcdcec82_1
r-fs=1.5.0=r36h0357c0b_0
r-gargle=1.1.0=r36hc72bb7e_0
r-generics=0.1.0=r36hc72bb7e_0
r-ggplot2=3.3.3=r36hc72bb7e_0
r-ggpubr=0.4.0=r36h6115d3f_0
r-ggrepel=0.9.1=r36h03ef668_0
r-ggsci=2.9=r36h6115d3f_1003
r-ggsignif=0.6.1=r36hc72bb7e_0
r-glue=1.4.2=r36hcfec24a_0
r-googledrive=1.0.1=r36h6115d3f_1
r-googlesheets4=0.3.0=r36hc72bb7e_0
r-gridextra=2.3=r36h6115d3f_0
r-gtable=0.3.0=r36h6115d3f_0
r-haven=2.4.1=r36h2713e49_0
r-hexbin=1.28.2=r36h859d828_0
r-highr=0.9=r36hc72bb7e_0
r-hms=1.1.0=r36hc72bb7e_0
r-htmltools=0.5.1.1=r36h03ef668_0
r-htmlwidgets=1.5.3=r36hc72bb7e_0
r-httr=1.4.2=r36h6115d3f_0
r-ids=1.0.1=r36h6115d3f_0
r-irdisplay=1.0=r36hd8ed1ab_0
r-irkernel=1.2=r36hc72bb7e_0
r-isoband=0.2.4=r36h03ef668_0
r-jsonlite=1.7.2=r36hcfec24a_0
r-kernsmooth=2.23_20=r36h742201e_0
r-knitr=1.33=r36hc72bb7e_0
r-labeling=0.4.2=r36h142f84f_0
r-later=1.2.0=r36h03ef668_0
r-lattice=0.20_44=r36hcfec24a_0
r-lazyeval=0.2.2=r36h96ca727_0
r-lifecycle=1.0.0=r36hc72bb7e_0
r-lme4=1.1_27=r36h03ef668_0
r-lubridate=1.7.10=r36h03ef668_0
r-magrittr=2.0.1=r36hcfec24a_1
r-maptools=1.1_1=r36hcfec24a_0
r-markdown=1.1=r36hcfec24a_1
r-mass=7.3_54=r36hcfec24a_0
r-matrix=1.3_3=r36he454529_0
r-matrixmodels=0.5_0=r36hc72bb7e_0
r-matrixstats=0.58.0=r36hcfec24a_0
r-mgcv=1.8_35=r36he454529_0
r-mime=0.10=r36hcfec24a_0
r-minqa=1.2.4=r36h228a9c8_1006
r-modelr=0.1.8=r36h6115d3f_0
r-munsell=0.5.0=r36h6115d3f_0
r-nbconvertr=1.0.2=r36h6115d3f_0
r-nlme=3.1_152=r36h859d828_0
r-nloptr=1.2.2.2=r36h0357c0b_0
r-nnet=7.3_16=r36hcfec24a_0
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