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Maternal pre-pregnant BMI: data extraction #18

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dlemas opened this issue Nov 30, 2022 · 2 comments
Open

Maternal pre-pregnant BMI: data extraction #18

dlemas opened this issue Nov 30, 2022 · 2 comments
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data extraction issues related to data extraction via R

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@dlemas
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dlemas commented Nov 30, 2022

Please extract the data within the "BEACH Study Overview" report that is stored within Redcap.

Script: get_reportData_21221.Rmd

This script requires:

  • access to BEACH study RedCap project via API token
  • R/rstudio configuration using the keyringr package
  • UF VPN access

This script will output:

  • data as an *.Rdata object locally within the directory ~/data/processed/
@dlemas dlemas added the data extraction issues related to data extraction via R label Nov 30, 2022
@dlemas dlemas added this to the BEACH Study Poster milestone Nov 30, 2022
@michele-himadi
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created code to pull final BMI from RedCap Report 21221. will check on it at next meeting

@michele-himadi
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@dlemas - after looking over the report, I have included the following Pre-pregnant BMI variables from the BEACH Study Overview (21221) report.

  • BEACH Study Overview (report)/ beach_final_bmi (variable)

Should we add variables from other reports?

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