README

2014-06-25 lizadams@email.unc.edu 1-919-843-0518

This directory contains the scripts for the smoketracking 
and the python script log_analyzer.

smoketracking - a C Shell program that invokes the log_analyzer program.

This script should be run after you have completed the SMOKE runs for each sector using test_smoketracking_area.csh or test_smoketracking_point.csh or it is called during a run using the smoke_calls.csh script.

To set up the environment on killdevil use
module load git   | loads the path to git within your environment
Then go to the SMK_HOME directory
setenv SMK_HOME /netscr/lizadams/SMOKEv40
cd $SMK_HOME/subsys/smoke/assigns
source ASSIGNS.CARB_base2012.cmaq.saprc
cd /netscr/lizadams/SMOKEv40/subsys/smoke/scripts/run/smoke-tracking
If the files have been removed from /netscr, they are available on /ms under:
/ms/depts/cep/cep-emc/lizadams/SMOKE/SMOKEv40.smoketracker.tar.gz
You probably need to update the smoketracker script if you use the archived version. 

To obtain the code using git use the following commands.
git clone https://github.com/lizadams/smoke-tracking.git

If you want to make modifications to the code, use git fork and then submit a pull request to the owner of the repository.
https://help.github.com/articles/fork-a-repo/ 

To submit new changes to these files on the github smoke-tracking site - as author of the site (lizadams):

https://github.com/lizadams/smoke-tracking

cd to the smoke-tracking directory and use the following commands:
git status | check to see if your local branch is up to date with the origin/master
git add    | add any files that are not staged for commit that need to be checked in
git commit | commit files to the branch
git push   | push files to github