MS_Reader v1.3.1

Changelog

• Changed some column headers

MS_Reader v1.3.0

Changelog

• Added handling of datasets where there is no 13C data
• Normalisation tables with empty columns will see those columns deleted by the software
• small bugfixes

MS_Reader v1.2.2

Changelog

*Fixed generated metadata file for normalisation keeping the calibration data points

MS_Reader v1.2.1

Changelog

• Fixed bug where normalised quantities LOQ table showed concentrations

MS_Reader v1.2.0

Changelog

• Added handling of situation where no calibration data is present
• Added associated tests

MS_Reader v1.1.2

Changelog

*Minor bug fixes
*Fixed issue #10 with QC name Oro being switched to Orotate

MS_Reader v1.1.1

Changelog

• Fixed bug in metabolite remover (issue #5)
• Minor bugfixes

MS_Reader v1.1.0

Changelog

• Changed normalised concentrations to normalised quantities
• Added in quantities tab (without norm)
• Added no normalisation tabs to normalisation tables
• Removed normalisation on 13C table
• Changed resuspension volume unit to µL. Now users must actually enter the resuspension volume and the software will calculate the corresponding quantity.
• Changed Graphstat output "/" into "per"
• Minor bug fixes

MS_Reader v1.0.0

First official release for ms_reader!

MS_Reader is a scientific tool made to parse and rearrange data from TraceFinder exported excel or csv data files.

Main features

• Biologist-riendly GUI interface made with streamlit
• Normalisation using an input data file that can be generated directly from inside the app
• Separation of data in different sheets in the final excel file (areas, 12C/13C ratios, concentrations)
• QC of data (MetaToul-Fluxomet QC method)
• Documentation that will be hosted on readthedocs.io (not yet implemented)
• Available on pypi

This is a routine tool used on the MetaToul-Fluxomet fluxomics and metabolomics platform.

For more info you can contact the author at [email protected]