diff --git a/drexml/datasets.py b/drexml/datasets.py index 36de4735..23340ee7 100644 --- a/drexml/datasets.py +++ b/drexml/datasets.py @@ -148,6 +148,7 @@ def get_disease_data(disease, debug): pathvals.columns = pathvals.columns.str.replace("-", ".").str.replace(" ", ".") circuits = fetch_file(disease, key="circuits", version="latest", debug=debug) circuits.index = circuits.index.str.replace("-", ".").str.replace(" ", ".") + circuits[circuits_column] = circuits[circuits_column].astype(bool) genes = fetch_file(disease, key="genes", version="latest", debug=debug) # gene_exp = gene_exp[genes.index[genes[genes_column]]]