Bug:

[XuJahcenia]

Describe the bug
I think I have done the install successfully. when I test:
macs3 -h
It works well.
And I tried to use the callpeak funtion :
macs3 callpeak -c OV-input-1_rmdup_picard.bam -t OV-E2F-1_rmdup_picard.bam -f BAM -B --outdir ../03_masc2 -g 2.9e9 -n OV-chip-1
and it reported an error:

Traceback (most recent call last):
File "/home/xujie/software/ENTER/envs/chip/bin/macs3", line 727, in
main()
File "/home/xujie/software/ENTER/envs/chip/bin/macs3", line 47, in main
from MACS3.Commands.callpeak_cmd import run
File "/home/xujie/software/ENTER/envs/chip/lib/python3.8/site-packages/MACS3/Commands/callpeak_cmd.py", line 24, in
from MACS3.Utilities.OptValidator import opt_validate_callpeak
File "/home/xujie/software/ENTER/envs/chip/lib/python3.8/site-packages/MACS3/Utilities/OptValidator.py", line 24, in
from MACS3.IO.Parser import BEDParser, ELANDResultParser, ELANDMultiParser,
File "MACS3/IO/Parser.pyx", line 30, in init MACS3.IO.Parser
File "MACS3/Signal/FixWidthTrack.pyx", line 28, in init MACS3.Signal.FixWidthTrack
File "MACS3/Signal/Pileup.pyx", line 23, in init MACS3.Signal.Pileup
File "MACS3/Signal/BedGraph.pyx", line 23, in init MACS3.Signal.BedGraph
File "MACS3/Signal/ScoreTrack.pyx", line 23, in init MACS3.Signal.ScoreTrack
ImportError: /lib64/libm.so.6: version `GLIBC_2.29' not found (required by /home/xujie/software/ENTER/envs/chip/lib/python3.8/site-packages/MACS3/Signal/Prob.cpython-38-x86_64-linux-gnu.so)

Expected behavior
Can anybody give some advice for that?

Screenshots
System (please complete the following information):

• Linux: [e.g. Linux, Mac OSX]
• Python version [e.g. 3.8.17]
• Numpy version [e.g. 1.23.5]
• MACS Version [e.g. 3.0.0]

[taoliu]

It seems that the version of math library you were running MACS3 on is different with the library you compiled the software. Not sure if it's related to #587. But could you provide us more detail on how you installed MACS3?