From 35dfeba36660e44928b9b123450e46277335e751 Mon Sep 17 00:00:00 2001 From: jdpigeon Date: Sat, 7 Mar 2020 15:04:30 -0500 Subject: [PATCH 1/7] Removed noble-winrt and patch-package --- app/package-lock.json | 35 +--- app/package.json | 5 +- app/patches/bleat+0.1.8.patch | 12 -- app/utils/eeg/muse.js | 55 +++--- package-lock.json | 362 ---------------------------------- package.json | 1 - 6 files changed, 31 insertions(+), 439 deletions(-) delete mode 100644 app/patches/bleat+0.1.8.patch diff --git a/app/package-lock.json b/app/package-lock.json index 39a5eb72..4a15e68f 100644 --- a/app/package-lock.json +++ b/app/package-lock.json @@ -315,11 +315,6 @@ "resolved": "https://registry.npmjs.org/chownr/-/chownr-1.1.3.tgz", "integrity": "sha512-i70fVHhmV3DtTl6nqvZOnIjbY0Pe4kAUjwHj8z0zAdgBtYrJyYwLKCCuRBQ5ppkyL0AkN7HKRnETdmdp1zqNXw==" }, - "chrome-native-messaging": { - "version": "0.2.0", - "resolved": "https://registry.npmjs.org/chrome-native-messaging/-/chrome-native-messaging-0.2.0.tgz", - "integrity": "sha1-wULN5SS9GxhU4U9X4HijlqbaOCY=" - }, "ci-info": { "version": "1.6.0", "resolved": "https://registry.npmjs.org/ci-info/-/ci-info-1.6.0.tgz", @@ -416,6 +411,7 @@ "version": "2.2.0", "resolved": "https://registry.npmjs.org/debug/-/debug-2.2.0.tgz", "integrity": "sha1-+HBX6ZWxofauaklgZkE3vFbwOdo=", + "optional": true, "requires": { "ms": "0.7.1" } @@ -927,7 +923,8 @@ "ms": { "version": "0.7.1", "resolved": "https://registry.npmjs.org/ms/-/ms-0.7.1.tgz", - "integrity": "sha1-nNE8A62/8ltl7/3nzoZO6VIBcJg=" + "integrity": "sha1-nNE8A62/8ltl7/3nzoZO6VIBcJg=", + "optional": true }, "nan": { "version": "2.14.0", @@ -969,6 +966,7 @@ "version": "1.9.1", "resolved": "https://registry.npmjs.org/noble/-/noble-1.9.1.tgz", "integrity": "sha1-LM0x6tjsktv/bxmkLkILJYvNzdA=", + "optional": true, "requires": { "bluetooth-hci-socket": "^0.5.1", "bplist-parser": "0.0.6", @@ -976,31 +974,6 @@ "xpc-connection": "~0.1.4" } }, - "noble-winrt": { - "version": "0.1.1", - "resolved": "https://registry.npmjs.org/noble-winrt/-/noble-winrt-0.1.1.tgz", - "integrity": "sha512-IUlWQfaHJMuiYOQTGvW4YdWeQR7E6tBVXut8KDMkIFGAKU+LNvTciWYTwHUlzqZKtuP3jc9VFMBvR9UDFNq7Sw==", - "requires": { - "chrome-native-messaging": "^0.2.0", - "debug": "^2.6.8", - "noble": "^1.7.0" - }, - "dependencies": { - "debug": { - "version": "2.6.9", - "resolved": "https://registry.npmjs.org/debug/-/debug-2.6.9.tgz", - "integrity": "sha512-bC7ElrdJaJnPbAP+1EotYvqZsb3ecl5wi6Bfi6BJTUcNowp6cvspg0jXznRTKDjm/E7AdgFBVeAPVMNcKGsHMA==", - "requires": { - "ms": "2.0.0" - } - }, - "ms": { - "version": "2.0.0", - "resolved": "https://registry.npmjs.org/ms/-/ms-2.0.0.tgz", - "integrity": "sha1-VgiurfwAvmwpAd9fmGF4jeDVl8g=" - } - } - }, "node-abi": { "version": "2.12.0", "resolved": "https://registry.npmjs.org/node-abi/-/node-abi-2.12.0.tgz", diff --git a/app/package.json b/app/package.json index c99fe8ab..0c947519 100644 --- a/app/package.json +++ b/app/package.json @@ -11,17 +11,16 @@ }, "scripts": { "electron-rebuild": "node -r babel-register ../internals/scripts/ElectronRebuild.js", - "postinstall": "patch-package && npm run electron-rebuild" + "postinstall": "npm run electron-rebuild" }, "license": "MIT", "dependencies": { "@babel/runtime-corejs2": "^7.0.0", "@neurosity/pipes": "^3.2.3", "babel-runtime": "^6.26.0", - "bleat": "^0.1.8", + "bleat": "^0.1.9", "enchannel-zmq-backend": "^6.0.11", "kernelspecs": "^2.0.0", - "noble-winrt": "^0.1.0", "node-pre-gyp": "^0.10.0", "spawnteract": "^4.0.0" }, diff --git a/app/patches/bleat+0.1.8.patch b/app/patches/bleat+0.1.8.patch deleted file mode 100644 index 2770f5c5..00000000 --- a/app/patches/bleat+0.1.8.patch +++ /dev/null @@ -1,12 +0,0 @@ -patch-package ---- a/node_modules/bleat/dist/adapter.noble.js -+++ b/node_modules/bleat/dist/adapter.noble.js -@@ -33,7 +33,7 @@ - } else if (typeof exports === 'object') { - // Node. Does not work with strict CommonJS - module.exports = function(bleat) { -- return factory(require('noble'), bleat, require('./bluetooth.helpers')); -+ return factory(require('noble-winrt'), bleat, require('./bluetooth.helpers')); - }; - } else { - // Browser globals with support for web workers (root is window) diff --git a/app/utils/eeg/muse.js b/app/utils/eeg/muse.js index ae2b076d..424a6af7 100644 --- a/app/utils/eeg/muse.js +++ b/app/utils/eeg/muse.js @@ -1,54 +1,49 @@ -import 'hazardous'; -import { withLatestFrom, share, startWith, filter } from 'rxjs/operators'; +import "hazardous"; +import { withLatestFrom, share, startWith, filter } from "rxjs/operators"; import { addInfo, epoch, bandpassFilter, addSignalQuality -} from '@neurosity/pipes'; -import { release } from 'os'; -import { MUSE_SERVICE, MuseClient, zipSamples } from 'muse-js'; -import { from } from 'rxjs'; -import { parseMuseSignalQuality } from './pipes'; +} from "@neurosity/pipes"; +import { release } from "os"; +import { MUSE_SERVICE, MuseClient, zipSamples } from "muse-js"; +import { from } from "rxjs"; +import { webbluetooth } from "bleat"; +import { parseMuseSignalQuality } from "./pipes"; import { MUSE_SAMPLING_RATE, MUSE_CHANNELS, PLOTTING_INTERVAL -} from '../../constants/constants'; +} from "../../constants/constants"; const INTER_SAMPLE_INTERVAL = -(1 / 256) * 1000; let bluetooth = {}; let client = {}; -if (process.platform !== 'win32' || release().split('.')[0] >= 10) { - // Just returns the client object from Muse JS - bluetooth = require('bleat').webbluetooth; - client = new MuseClient(); - client.enableAux = true; + +if (process.platform === "win32" && release().split(".")[0] < 10) { + console.error("Muse EEG not available in Windows 7"); } + +client = new MuseClient(); +client.enableAux = false; + // Gets an available Muse device // TODO: test whether this will ever return multiple devices if available export const getMuse = async () => { let device = {}; - if (process.platform === 'win32') { - if (release().split('.')[0] < 10) { - console.log('win 7 '); - return null; - } - device = await bluetooth.requestDevice({ - filters: [{ services: [MUSE_SERVICE] }] - }); - } else { - device = await navigator.bluetooth.requestDevice({ - filters: [{ services: [MUSE_SERVICE] }] - }); - } + console.log("getting muse"); + device = await webbluetooth.requestDevice({ + filters: [{ services: [MUSE_SERVICE] }] + }); + console.log("received ", device); return [device]; }; // Attempts to connect to a muse device. If successful, returns a device info object export const connectToMuse = async device => { - if (process.platform === 'win32') { + if (process.platform === "win32") { const gatt = await device.gatt.connect(); await client.connect(gatt); } else { @@ -111,10 +106,10 @@ export const injectMuseMarker = (value, time) => { const synchronizeTimestamp = (eegSample, marker) => { if ( - eegSample['timestamp'] - marker['timestamp'] < 0 && - eegSample['timestamp'] - marker['timestamp'] >= INTER_SAMPLE_INTERVAL + eegSample["timestamp"] - marker["timestamp"] < 0 && + eegSample["timestamp"] - marker["timestamp"] >= INTER_SAMPLE_INTERVAL ) { - return { ...eegSample, marker: marker['value'] }; + return { ...eegSample, marker: marker["value"] }; } return eegSample; }; diff --git a/package-lock.json b/package-lock.json index dddb7c7e..98aca2bb 100644 --- a/package-lock.json +++ b/package-lock.json @@ -4517,12 +4517,6 @@ "rsvp": "^3.3.3" } }, - "capture-stack-trace": { - "version": "1.0.1", - "resolved": "https://registry.npmjs.org/capture-stack-trace/-/capture-stack-trace-1.0.1.tgz", - 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"version": "0.14.1", + "version": "0.14.2", "description": "EEG Desktop Application", "main": "./main.prod.js", "type": "module", diff --git a/package.json b/package.json index 60da5165..f55ca0c0 100644 --- a/package.json +++ b/package.json @@ -1,7 +1,7 @@ { "name": "brainwaves", "productName": "BrainWaves", - "version": "0.14.1", + "version": "0.14.2", "description": "EEG Experiment Desktop Application", "scripts": { "build": "concurrently \"yarn build-main\" \"yarn build-renderer\"", From b9347559fcacce2303a408561a74fddc30fe44b3 Mon Sep 17 00:00:00 2001 From: Dano Morrison Date: Sat, 19 Sep 2020 13:22:11 -0400 Subject: [PATCH 4/7] fixed bug with muse plotting --- app/constants/interfaces.ts | 9 ++++++-- app/epics/deviceEpics.ts | 3 ++- app/main.dev.ts | 2 ++ app/reducers/deviceReducer.ts | 2 +- app/utils/eeg/emotiv.ts | 32 ++++++++++++++++++++------- app/utils/eeg/muse.ts | 41 ++++++++++++++++++++++++----------- 6 files changed, 64 insertions(+), 25 deletions(-) diff --git a/app/constants/interfaces.ts b/app/constants/interfaces.ts index cb08b933..52c7a119 100644 --- a/app/constants/interfaces.ts +++ b/app/constants/interfaces.ts @@ -113,9 +113,12 @@ export interface Kernel { // -------------------------------------------------------------------- // Device -// TODO: type this based on what comes out of muse and emotiv +// For unconnected available devices export interface Device { - [key: string]: any; + // Human readable + name?: string; + // Unique ID + id: string; } export interface EEGData { @@ -130,9 +133,11 @@ export interface SignalQualityData { timestamp?: number; } +// For connected devices export interface DeviceInfo { name: string; samplingRate: number; + channels: string[]; } export interface PipesEpoch { diff --git a/app/epics/deviceEpics.ts b/app/epics/deviceEpics.ts index d40a1d7e..520292e7 100644 --- a/app/epics/deviceEpics.ts +++ b/app/epics/deviceEpics.ts @@ -129,7 +129,7 @@ const connectEpic: Epic = ( action$.pipe( filter(isActionOf(DeviceActions.ConnectToDevice)), pluck('payload'), - map>((device) => + map((device) => isNil(device.name) ? connectToEmotiv(device) : connectToMuse(device) ), mergeMap, ObservableInput>((promise) => @@ -137,6 +137,7 @@ const connectEpic: Epic = ( ), mergeMap>((deviceInfo) => { if (!isNil(deviceInfo) && !isNil(deviceInfo.samplingRate)) { + console.log(deviceInfo); return of( DeviceActions.SetDeviceType( deviceInfo.name.includes('Muse') ? DEVICES.MUSE : DEVICES.EMOTIV diff --git a/app/main.dev.ts b/app/main.dev.ts index 53a35c6e..33fa4067 100644 --- a/app/main.dev.ts +++ b/app/main.dev.ts @@ -76,9 +76,11 @@ const createWindow = async () => { process.env.ERB_SECURE !== 'true' ? { nodeIntegration: true, + webviewTag: true, } : { preload: path.join(__dirname, 'dist/renderer.prod.js'), + webviewTag: true, }, }); diff --git a/app/reducers/deviceReducer.ts b/app/reducers/deviceReducer.ts index f296b257..a887e5a9 100644 --- a/app/reducers/deviceReducer.ts +++ b/app/reducers/deviceReducer.ts @@ -26,7 +26,7 @@ export interface DeviceStateType { } const initialState: DeviceStateType = { - availableDevices: [{}], + availableDevices: [], connectedDevice: { name: 'disconnected', samplingRate: 0 }, connectionStatus: CONNECTION_STATUS.NOT_YET_CONNECTED, deviceAvailability: DEVICE_AVAILABILITY.NONE, diff --git a/app/utils/eeg/emotiv.ts b/app/utils/eeg/emotiv.ts index 878cca56..2ef7eb88 100644 --- a/app/utils/eeg/emotiv.ts +++ b/app/utils/eeg/emotiv.ts @@ -11,6 +11,19 @@ import { parseEmotivSignalQuality } from './pipes'; import { CLIENT_ID, CLIENT_SECRET, LICENSE_ID } from '../../../keys'; import { EMOTIV_CHANNELS, PLOTTING_INTERVAL } from '../../constants/constants'; import Cortex from './cortex'; +import { Device, DeviceInfo } from '../../constants/interfaces'; + +interface EmotivHeadset { + id: string; + status: 'discovered' | 'connecting' | 'connected'; + connectedBy: 'dongle' | 'bluetooth' | 'usb cabe' | 'extender'; + dongle: string; + firmware: string; + motionSensors: string[]; + sensors: string[]; + settings: Record; + customName?: string; +} // Creates the Cortex object from SDK const verbose = process.env.LOG_LEVEL || 1; @@ -26,11 +39,16 @@ let session; // Gets a list of available Emotiv devices export const getEmotiv = async () => { - const devices = await client.queryHeadsets(); - return devices; + const devices: EmotivHeadset[] = await client.queryHeadsets(); + return devices.map((headset) => ({ + id: headset.id, + name: headset.customName, + })); }; -export const connectToEmotiv = async (device) => { +export const connectToEmotiv = async ( + device: Device +): Promise => { await client.ready; // Authenticate @@ -43,14 +61,14 @@ export const connectToEmotiv = async (device) => { }); } catch (err) { toast.error(`Authentication failed. ${err.message}`); - return; + return Promise.reject(err); } // Connect try { await client.controlDevice({ command: 'connect', headset: device.id }); } catch (err) { toast.error(`Emotiv connection failed. ${err.message}`); - return; + return Promise.reject(err); } // Create Session try { @@ -67,11 +85,11 @@ export const connectToEmotiv = async (device) => { }; } catch (err) { toast.error(`Session creation failed. ${err.message} `); + return Promise.reject(err); } }; export const disconnectFromEmotiv = async () => { - console.log('disconnecting form emotiv'); const sessionStatus = await client.updateSession({ session: session.id, status: 'close', @@ -93,13 +111,11 @@ export const createRawEmotivObservable = async () => { toast.error(`EEG connection failed. ${err.message}`); } - // @ts-ignore return fromEvent(client, 'eeg').pipe(map(createEEGSample)); }; // Creates an observable that will epoch, filter, and add signal quality to EEG stream export const createEmotivSignalQualityObservable = (rawObservable) => { - // @ts-ignore const signalQualityObservable = fromEvent(client, 'dev'); const samplingRate = 128; const channels = EMOTIV_CHANNELS; diff --git a/app/utils/eeg/muse.ts b/app/utils/eeg/muse.ts index ce9080e5..1c3bb86f 100644 --- a/app/utils/eeg/muse.ts +++ b/app/utils/eeg/muse.ts @@ -1,5 +1,12 @@ import 'hazardous'; -import { withLatestFrom, share, startWith, filter } from 'rxjs/operators'; +import { + withLatestFrom, + share, + startWith, + filter, + tap, + map, +} from 'rxjs/operators'; import { addInfo, epoch, @@ -7,14 +14,16 @@ import { addSignalQuality, } from '@neurosity/pipes'; import { release } from 'os'; -import { MUSE_SERVICE, MuseClient, zipSamples } from 'muse-js'; -import { from } from 'rxjs'; +import { MUSE_SERVICE, MuseClient, zipSamples, EEGSample } from 'muse-js'; +import { from, Observable } from 'rxjs'; +import { isNaN } from 'lodash'; import { parseMuseSignalQuality } from './pipes'; import { MUSE_SAMPLING_RATE, MUSE_CHANNELS, PLOTTING_INTERVAL, } from '../../constants/constants'; +import { Device, EEGData } from '../../constants/interfaces'; const INTER_SAMPLE_INTERVAL = -(1 / 256) * 1000; @@ -27,22 +36,23 @@ if ( const client = new MuseClient(); client.enableAux = false; -console.log('this', this, 'ble', navigator.bluetooth); // Gets an available Muse device -// TODO: test whether this will ever return multiple devices if available +// TODO: is being able to request only one Muse at a time a problem in a classroom scenario? export const getMuse = async () => { - console.log('getting muse'); - const device = await navigator.bluetooth.requestDevice({ + const deviceInstance = await navigator.bluetooth.requestDevice({ filters: [{ services: [MUSE_SERVICE] }], }); - console.log('received ', device); - return [device]; + return [{ id: deviceInstance.id, name: deviceInstance.name }]; }; // Attempts to connect to a muse device. If successful, returns a device info object -export const connectToMuse = async (device: BluetoothDevice) => { - await client.connect(device.gatt); +export const connectToMuse = async (device: Device) => { + const deviceInstance = await navigator.bluetooth.requestDevice({ + filters: [{ services: [MUSE_SERVICE], name: device.name }], + }); + const gatt = await deviceInstance.gatt?.connect(); + await client.connect(gatt); return { name: client.deviceName, samplingRate: MUSE_SAMPLING_RATE, @@ -58,7 +68,12 @@ export const createRawMuseObservable = async () => { const eegStream = await client.eegReadings; const markers = await client.eventMarkers.pipe(startWith({ timestamp: 0 })); return from(zipSamples(eegStream)).pipe( - filter((sample) => !sample.data.includes(NaN)), + // Remove nans if present (muse 2) + map((sample) => ({ + ...sample, + data: sample.data.filter((val) => !isNaN(val)), + })), + filter((sample) => sample.data.length >= 4), withLatestFrom(markers, synchronizeTimestamp), share() ); @@ -66,7 +81,7 @@ export const createRawMuseObservable = async () => { // Creates an observable that will epoch, filter, and add signal quality to EEG stream export const createMuseSignalQualityObservable = ( - rawObservable, + rawObservable: Observable, deviceInfo ) => { const { samplingRate, channels: channelNames } = deviceInfo; From bcb2a4cd6b66330a8f4b771b0ef4143088c23f14 Mon Sep 17 00:00:00 2001 From: Dano Morrison Date: Sat, 19 Sep 2020 13:31:55 -0400 Subject: [PATCH 5/7] Tweaked eeg viewer for muse --- app/components/ViewerComponent.tsx | 7 ++++--- app/components/d3Classes/EEGViewer.js | 2 +- app/constants/constants.ts | 2 +- 3 files changed, 6 insertions(+), 5 deletions(-) diff --git a/app/components/ViewerComponent.tsx b/app/components/ViewerComponent.tsx index a5c6738a..4d395e0f 100644 --- a/app/components/ViewerComponent.tsx +++ b/app/components/ViewerComponent.tsx @@ -113,13 +113,14 @@ class ViewerComponent extends Component { } render() { + const trueAsString = 'true' as any; return ( ); } diff --git a/app/components/d3Classes/EEGViewer.js b/app/components/d3Classes/EEGViewer.js index a12f03d4..bca2f776 100644 --- a/app/components/d3Classes/EEGViewer.js +++ b/app/components/d3Classes/EEGViewer.js @@ -14,7 +14,7 @@ class EEGViewer { this.zoom = 1; this.zoomScalar = 1.5; this.canvas = d3.select(svg); - this.margin = { top: 20, right: 10, bottom: 0, left: 20 }; + this.margin = { top: 20, right: 10, bottom: 0, left: 30 }; this.channelMaxs = new Array(this.channels.length).fill(100); this.channelMins = new Array(this.channels.length).fill(-100); this.lastTimestamp = new Date().getTime(); diff --git a/app/constants/constants.ts b/app/constants/constants.ts index 6749905b..ec767725 100644 --- a/app/constants/constants.ts +++ b/app/constants/constants.ts @@ -109,7 +109,7 @@ export const EMOTIV_CHANNELS = [ 'AF4', ]; -export const MUSE_CHANNELS = ['TP9', 'AF7', 'AF8', 'TP10', 'AUX']; +export const MUSE_CHANNELS = ['TP9', 'AF7', 'AF8', 'TP10']; export const ZOOM_SCALAR = 1.5; export const MUSE_SAMPLING_RATE = 256; From 18c76b91f5618072d25d1e1de841a1d41a0cc081 Mon Sep 17 00:00:00 2001 From: Dano Morrison Date: Sat, 19 Sep 2020 13:36:42 -0400 Subject: [PATCH 6/7] Updated changelog --- CHANGELOG.md | 7 +++++++ 1 file changed, 7 insertions(+) diff --git a/CHANGELOG.md b/CHANGELOG.md index 8eb44e97..386537fd 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -1,3 +1,10 @@ +# 0.14.2 (September 19, 2020) - TypeScript and tooling update + +- TypeScript +- Dependencies update +- CI +- Remove Windows-specific bluetooth overrides + # 0.13.0 (May 18, 2020) - Improved usability and tasks - Removed remnants of old experiment backend From e172a4f8171288ae760f586f105bd3a969401a36 Mon Sep 17 00:00:00 2001 From: Dano Morrison Date: Sat, 19 Sep 2020 14:31:44 -0400 Subject: [PATCH 7/7] Fixed deviceReducer bug --- app/reducers/deviceReducer.ts | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/app/reducers/deviceReducer.ts b/app/reducers/deviceReducer.ts index a887e5a9..fe39fca0 100644 --- a/app/reducers/deviceReducer.ts +++ b/app/reducers/deviceReducer.ts @@ -27,7 +27,7 @@ export interface DeviceStateType { const initialState: DeviceStateType = { availableDevices: [], - connectedDevice: { name: 'disconnected', samplingRate: 0 }, + connectedDevice: { name: 'disconnected', samplingRate: 0, channels: [] }, connectionStatus: CONNECTION_STATUS.NOT_YET_CONNECTED, deviceAvailability: DEVICE_AVAILABILITY.NONE, rawObservable: null,