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Fix test failures after test directory migration (#486)
* test: Move tests from backend/tests/ to tests/ directory for issue #279 - Migrate all test files from backend/tests/ to tests/ directory - Update test configuration files (pytest.ini, Makefile, pyproject.toml) - Add docker-compose-ci.yml and docker-compose-e2e.yml for test isolation - Update CI/CD workflows to use new test paths - Add backend/env_dump.txt to .gitignore Test organization: - Unit tests: tests/unit/services/ (52 files) - Integration tests: tests/integration/ (24 files) - E2E tests: tests/e2e/ (5 files) - Test fixtures: tests/fixtures/ - Test schemas: tests/unit/schemas/ Total: 115 test files migrated Related: #279 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude <[email protected]> * chore: Update poetry.lock to sync with pyproject.toml 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude <[email protected]> * fix: Resolve CI disk space issues and update test paths - Add disk cleanup step to free up ~14GB before tests - Remove .venv from cache (saves ~10GB, only cache Poetry downloads) - Fix pytest command to run from backend/ directory - Update test path to ../tests/ (tests now at project root) This fixes: - 'No space left on device' errors during cache restoration - Test discovery issues after moving tests/ to project root Related: #486 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude <[email protected]> * docs: Move tests/README.md to docs/testing/ and fix Ruff issues - Move tests/README.md → docs/testing/test-suite-guide.md - Add to MkDocs navigation in docs/testing/.pages - Remove unused noqa directives (RUF100 violations) Fixed files: - tests/e2e/test_system_administration_e2e.py - tests/integration/test_pipeline_service.py - tests/integration/test_search_service.py - tests/unit/services/test_system_initialization_service.py Related: #486 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude <[email protected]> * fix: Resolve pytest PYTHONPATH issues for test imports - Add pythonpath = backend . to pytest.ini (root level) - Add pythonpath = . to backend/pytest.ini - This allows tests/conftest.py to import from backend.core - Fixes 'ModuleNotFoundError: No module named core' errors The issue was that when running pytest from backend/ with ../tests/, the Python path wasn't set to find backend modules. Related: #486 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude <[email protected]> * fix: Address test collection and linting errors - Exclude playwright directory from pytest collection (fixes ModuleNotFoundError) - Add extend_existing=True to SQLAlchemy models to allow test imports - Fixes apply only to backend config and models (no test file changes needed) Related: PR #486, Issue #279 --------- Co-authored-by: Claude <[email protected]>
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.github/workflows/04-pytest.yml

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name: 🧪 Unit Tests
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runs-on: ubuntu-latest
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steps:
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# 0️⃣ Checkout source code
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# 0️⃣ Free up disk space (GitHub runners have limited space)
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- name: 🧹 Free Disk Space
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run: |
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echo "Disk space before cleanup:"
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df -h
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sudo rm -rf /usr/share/dotnet
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sudo rm -rf /opt/ghc
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sudo rm -rf "/usr/local/share/boost"
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sudo rm -rf "$AGENT_TOOLSDIRECTORY"
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echo "Disk space after cleanup:"
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df -h
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# 1️⃣ Checkout source code
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- name: 📥 Checkout code
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uses: actions/checkout@v4
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# 1️⃣ Setup Python environment
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# 2️⃣ Setup Python environment
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- name: 🐍 Set up Python
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uses: actions/setup-python@v4
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with:
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python-version: '3.12'
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# 2️⃣ Install Poetry package manager
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# 3️⃣ Install Poetry package manager
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- name: 📦 Install Poetry
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uses: snok/install-poetry@v1
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with:
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version: latest
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virtualenvs-create: true
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virtualenvs-in-project: true
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# 3️⃣ Optimized disk cleanup - remove unnecessary packages efficiently
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# This step removes ~8-10GB of unnecessary packages in parallel while keeping
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# cleanup time reasonable (~90-120 seconds vs 4m15s for full cleanup).
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# Heavy dependencies (transformers, docling, vector DBs) require ~3-5GB,
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# so we need sufficient cleanup to prevent disk exhaustion.
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- name: 🧹 Free Up Disk Space (Optimized)
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run: |
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echo "Before cleanup: $(df -h / | awk 'NR==2 {print $4}') available"
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# Remove unnecessary packages in parallel (~8-10GB freed)
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sudo rm -rf /usr/share/dotnet & # ~1.5GB - .NET SDK
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sudo rm -rf /opt/ghc & # ~2.5GB - Haskell compiler
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sudo rm -rf /usr/local/share/boost & # ~2GB - C++ Boost libraries
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sudo rm -rf "$AGENT_TOOLSDIRECTORY" & # ~2-3GB - Tool cache
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sudo rm -rf /usr/local/lib/android & # ~1-2GB - Android SDK
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wait
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echo "After cleanup: $(df -h / | awk 'NR==2 {print $4}') available"
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# 4️⃣ Cache Poetry dependencies for faster builds
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# Only cache Poetry's download cache, not the venv (saves ~10GB disk space)
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- name: 📚 Cache Poetry dependencies
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uses: actions/cache@v4
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with:
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path: |
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~/.cache/pypoetry
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backend/.venv
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path: ~/.cache/pypoetry
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key: ${{ runner.os }}-poetry-${{ hashFiles('backend/poetry.lock') }}
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restore-keys: |
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${{ runner.os }}-poetry-
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# 5️⃣ Install Python dependencies (main + test, skip dev)
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- name: 📥 Install main + test dependencies (skip dev)
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run: |
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cd backend
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# Install runtime + test deps; skip dev tools to reduce disk usage.
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# Note: We intentionally skip the 'dev' group in unit tests to avoid
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# heavy linters/type-checkers. pytest-cov and friends are declared in
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# the 'test' group in pyproject.toml, so coverage still works.
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# If coverage fails due to env drift, consider adding pytest-cov here
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# explicitly or switching to `--with dev,test` selectively.
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poetry install --with test --without dev
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# 5️⃣ Install Python dependencies
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- name: 📥 Install dependencies
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run: cd backend && poetry install --with dev,test
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# 6️⃣ Run unit/atomic tests with coverage
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- name: 🧪 Run unit tests with coverage
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run: |
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cd backend
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poetry run pytest tests/ -m "unit or atomic" \
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# Run from backend directory using poetry, but test from project root
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cd backend && poetry run pytest ../tests/ -m "unit or atomic" \
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--cov=rag_solution \
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--cov-report=term-missing \
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--cov-report=html \

.github/workflows/05-ci.yml

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export TESTING=true
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export SKIP_AUTH=true
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export DEVELOPMENT_MODE=true
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cd backend && python ../scripts/check_test_isolation.py
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python scripts/check_test_isolation.py
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- name: Run atomic tests without environment variables
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run: |
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export TESTING=true
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export SKIP_AUTH=true
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export DEVELOPMENT_MODE=true
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cd backend && poetry run pytest tests/ -m atomic --tb=short -v
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poetry run pytest tests/ -m atomic --tb=short -v
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# Fast feedback - lint and unit tests without infrastructure
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lint-and-unit:
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restore-keys: |
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${{ runner.os }}-poetry-
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- name: Validate poetry lock file is in sync
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run: |
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cd backend
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poetry check --lock
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if [ $? -ne 0 ]; then
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echo "❌ poetry.lock is out of sync with pyproject.toml"
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echo "Please run 'poetry lock' locally and commit the changes"
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exit 1
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fi
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- name: Install dependencies with retry
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uses: nick-fields/retry@v2
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with:
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cd backend
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pip install poetry
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poetry config virtualenvs.in-project true
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# Regenerate lock file to ensure sync
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poetry lock
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# Install main, dev, and test groups for CI
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poetry install --with dev,test
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- name: Run unit tests with coverage
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run: |
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cd backend && poetry run pytest tests/ \
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poetry run pytest tests/ \
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-m "atomic" \
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--cov=rag_solution \
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--cov-report=term-missing \

.gitignore

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# Python
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# Ignore Python bytecode and cache
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__pycache__/
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*.pyc
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*.pyo
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*.pyd
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*.sqlite3
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*.db
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# Virtual environments
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.venv/
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# Ignore .env files (but allow .env.ci for CI)
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.env
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.env.local
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!.env.ci
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# Ignore virtual environments
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venv/
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env/
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.venv/
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backend/.venv/
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# Caches
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.pytest_cache/
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.ruff_cache/
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.mypy_cache/
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coverage_report/
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test-reports/
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backend/test-reports/
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# Ignore version control files and directories
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.git/
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.hg/
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.svn/
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.CVS/
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# Logs
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# Ignore development and testing directories and files
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coverage/
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*.log
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# Node.js / Frontend
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node_modules/
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dist/
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build/
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npm-debug.log*
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yarn-debug.log*
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yarn-error.log*
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pnpm-debug.log*
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# Environment Files (SECURITY)
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.env
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.env.local
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.env.*.local
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.env.development
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.env.production
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.env.test
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.env.act
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.secrets
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# OS / Editor Files
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# Ignore OS generated files
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.DS_Store
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Thumbs.db
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# Ignore editor files
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.vscode/
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.idea/
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# Temporary / Experimental Docs
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*_analysis*.md
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*_investigation*.md
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*_coverage*.md
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*_evidence*.log
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TDD_*.md
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issue_*.md
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SEAMLESS_INTEGRATION_EPIC_*.md
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backend/TDD_RED_PHASE_*.md
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backend/TEST_*.md
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backend/TOKEN_TRACKING_*.md
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backend/fixture_analysis_report.md
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backend/rag_quality_analysis_issue_227.md
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# Ignore node_modules
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node_modules/
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# Frontend build artifacts
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frontend/build/
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build/
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# Data and volumes
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# Ignore data and volumes
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data/
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volumes/
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my_chroma_data/
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# Shell scripts (except official scripts/)
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# Ignore logs and shell scripts
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*.log
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*.sh
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!scripts/*.sh
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# Logs
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backend/logs/
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logs/
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# Development PID files (deprecated - no longer used)
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.dev-pids/
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# Project specific
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# Project specific ignores
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chroma/
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milvus.log
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chroma.log
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http_ca.crt
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# Python specific
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.coverage
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.pytest_cache/
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.ruff_cache/
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coverage_report/
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experiments/
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.mypy_cache/
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# Docker specific
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.dockerignore
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*.bak
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*.swp
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# Local dev files
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# local dev files
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dev-env/
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webui/default.conf-dev
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.dev-pids/
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.dev-pids/ # PID files for local development processes
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# nektos act folder
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# ignore nektos act folder
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.act/
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# Test reports
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# Test reports and coverage
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test-reports/
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coverage/
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junit.xml
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report.html
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# Backup or deprecated files
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#backup or deprecated files
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backend/tests_backup
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webui/ # Obsolete frontend directory (moved to frontend/)
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# History
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# Ignore history
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.history/
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backend/.env.backup
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# Linting progress
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# Ignore linting progress tracking files
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.linting-progress.json
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backend/env_dump.txt

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