From 78d6a3cd11b8cafba4afc6b679db253831376a23 Mon Sep 17 00:00:00 2001
From: GitHub Action <action@github.com>
Date: Sun, 11 Jun 2023 14:18:40 +0000
Subject: [PATCH] Rebuilding documentation and generated files with Github
 Action

---
 project/excel/sssom_schema.xlsx             | Bin 6969 -> 6968 bytes
 project/jsonld/sssom_schema.context.jsonld  |   4 +-
 project/jsonld/sssom_schema.jsonld          |  12 +-
 project/jsonschema/sssom_schema.schema.json |   2 +-
 project/owl/sssom_schema.owl.ttl            | 284 +++++++-------
 project/prefixmap/sssom_schema.yaml         |   2 +-
 project/shacl/sssom_schema.shacl.ttl        | 394 ++++++++++----------
 project/shex/sssom_schema.shex              |   2 +-
 src/sssom_schema/datamodel/sssom_schema.py  |   4 +-
 9 files changed, 352 insertions(+), 352 deletions(-)

diff --git a/project/excel/sssom_schema.xlsx b/project/excel/sssom_schema.xlsx
index d5d40da440a78ace128852a5e2516ddb4d20c3c4..1b3b58d5de016aa88cd2b885db227bc5729b26ca 100644
GIT binary patch
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ANB{r;

diff --git a/project/jsonld/sssom_schema.context.jsonld b/project/jsonld/sssom_schema.context.jsonld
index 38dfa95f..7ff4404a 100644
--- a/project/jsonld/sssom_schema.context.jsonld
+++ b/project/jsonld/sssom_schema.context.jsonld
@@ -1,5 +1,5 @@
 {
-   "_comments": "Auto generated from sssom_schema.yaml by jsonldcontextgen.py version: 0.1.1\n    Generation date: 2023-03-16T14:57:33\n    Schema: sssom\n    metamodel version: 1.7.0\n    model version: None\n    \n    id: https://w3id.org/sssom/schema/\n    description: Datamodel for Simple Standard for Sharing Ontological Mappings (SSSOM)\n    license: https://creativecommons.org/publicdomain/zero/1.0/\n    ",
+   "_comments": "Auto generated from sssom_schema.yaml by jsonldcontextgen.py version: 0.1.1\n    Generation date: 2023-06-11T14:18:30\n    Schema: sssom\n    metamodel version: 1.7.0\n    model version: None\n    \n    id: https://w3id.org/sssom/schema/\n    description: Datamodel for Simple Standard for Sharing Ontological Mappings (SSSOM)\n    license: https://creativecommons.org/publicdomain/zero/1.0/\n    ",
    "@context": {
       "dc": "http://purl.org/dc/terms/",
       "dcterms": "http://purl.org/dc/terms/",
@@ -10,7 +10,7 @@
       "prov": "http://www.w3.org/ns/prov#",
       "rdf": "http://www.w3.org/1999/02/22-rdf-syntax-ns#",
       "rdfs": "http://www.w3.org/2000/01/rdf-schema#",
-      "semapv": "https://w3id.org/semapv/",
+      "semapv": "https://w3id.org/semapv/vocab/",
       "skos": "http://www.w3.org/2004/02/skos/core#",
       "sssom": "https://w3id.org/sssom/",
       "@vocab": "https://w3id.org/sssom/",
diff --git a/project/jsonld/sssom_schema.jsonld b/project/jsonld/sssom_schema.jsonld
index f1393cae..ec2c5929 100644
--- a/project/jsonld/sssom_schema.jsonld
+++ b/project/jsonld/sssom_schema.jsonld
@@ -45,7 +45,7 @@
     },
     {
       "prefix_prefix": "semapv",
-      "prefix_reference": "https://w3id.org/semapv/"
+      "prefix_reference": "https://w3id.org/semapv/vocab/"
     }
   ],
   "default_curi_maps": [
@@ -158,7 +158,7 @@
         "schema:Time"
       ],
       "base": "XSDTime",
-      "uri": "http://www.w3.org/2001/XMLSchema#dateTime",
+      "uri": "http://www.w3.org/2001/XMLSchema#time",
       "repr": "str",
       "@type": "TypeDefinition"
     },
@@ -1137,7 +1137,7 @@
     {
       "name": "reviewer_label",
       "definition_uri": "https://w3id.org/sssom/reviewer_label",
-      "description": "A string identifying the reviewer of this mapping. In the spirit of provenance, consider to use author_id instead.",
+      "description": "A string identifying the reviewer of this mapping. In the spirit of provenance, consider to use reviewer_id instead.",
       "from_schema": "https://w3id.org/sssom/schema/",
       "slot_uri": "https://w3id.org/sssom/reviewer_label",
       "multivalued": true,
@@ -1778,9 +1778,9 @@
   ],
   "metamodel_version": "1.7.0",
   "source_file": "sssom_schema.yaml",
-  "source_file_date": "2023-03-16T13:09:31",
-  "source_file_size": 25619,
-  "generation_date": "2023-03-16T14:57:34",
+  "source_file_date": "2023-06-11T14:17:57",
+  "source_file_size": 25627,
+  "generation_date": "2023-06-11T14:18:30",
   "@type": "SchemaDefinition",
   "@context": [
     "project/jsonld/sssom_schema.context.jsonld",
diff --git a/project/jsonschema/sssom_schema.schema.json b/project/jsonschema/sssom_schema.schema.json
index 448a4bb9..9e0d1f6a 100644
--- a/project/jsonschema/sssom_schema.schema.json
+++ b/project/jsonschema/sssom_schema.schema.json
@@ -175,7 +175,7 @@
                "type": "array"
             },
             "reviewer_label": {
-               "description": "A string identifying the reviewer of this mapping. In the spirit of provenance, consider to use author_id instead.",
+               "description": "A string identifying the reviewer of this mapping. In the spirit of provenance, consider to use reviewer_id instead.",
                "items": {
                   "type": "string"
                },
diff --git a/project/owl/sssom_schema.owl.ttl b/project/owl/sssom_schema.owl.ttl
index c0a767dc..a9062c56 100644
--- a/project/owl/sssom_schema.owl.ttl
+++ b/project/owl/sssom_schema.owl.ttl
@@ -33,11 +33,11 @@ sssom:predicate_type a owl:ObjectProperty,
     dcterms:license "https://creativecommons.org/publicdomain/zero/1.0/" ;
     rdfs:seeAlso "https://github.com/mapping-commons/sssom",
         "https://mapping-commons.github.io/sssom/home/" ;
-    linkml:generation_date "2023-03-16T14:57:38" ;
+    linkml:generation_date "2023-06-11T14:18:31" ;
     linkml:metamodel_version "1.7.0" ;
     linkml:source_file "sssom_schema.yaml" ;
-    linkml:source_file_date "2023-03-16T13:09:31" ;
-    linkml:source_file_size 25619 .
+    linkml:source_file_date "2023-06-11T14:17:57" ;
+    linkml:source_file_size 25627 .
 
 dcterms:created a owl:ObjectProperty,
         linkml:SlotDefinition ;
@@ -53,95 +53,91 @@ sssom:MappingRegistry a owl:Class,
         linkml:ClassDefinition ;
     rdfs:label "mapping registry" ;
     rdfs:subClassOf [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:String ;
-            owl:onProperty sssom:mapping_registry_title ],
+            owl:allValuesFrom linkml:Uri ;
+            owl:onProperty sssom:imports ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Uri ;
-            owl:onProperty sssom:documentation ],
+            owl:onClass linkml:String ;
+            owl:onProperty sssom:mapping_registry_description ],
         [ a owl:Restriction ;
             owl:onClass sssom:EntityReference ;
             owl:onProperty sssom:mapping_registry_id ;
             owl:qualifiedCardinality 1 ],
+        [ a owl:Restriction ;
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:Uri ;
+            owl:onProperty sssom:homepage ],
         [ a owl:Restriction ;
             owl:allValuesFrom sssom:MappingSetReference ;
             owl:onProperty sssom:mapping_set_references ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:Uri ;
-            owl:onProperty sssom:homepage ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:Uri ;
-            owl:onProperty sssom:imports ],
+            owl:onProperty sssom:documentation ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:String ;
-            owl:onProperty sssom:mapping_registry_description ] ;
+            owl:onProperty sssom:mapping_registry_title ] ;
     skos:definition "A registry for managing mapping sets. It holds a set of mapping set references, and can import other registries." .
 
 sssom:MappingSet a owl:Class,
         linkml:ClassDefinition ;
     rdfs:label "mapping set" ;
     rdfs:subClassOf [ a owl:Restriction ;
-            owl:allValuesFrom linkml:String ;
-            owl:onProperty rdfs:seeAlso ],
+            owl:allValuesFrom sssom:EntityReference ;
+            owl:onProperty dcterms:creator ],
         [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Uri ;
-            owl:onProperty sssom:mapping_provider ],
+            owl:allValuesFrom linkml:Uri ;
+            owl:onProperty prov:wasDerivedFrom ],
+        [ a owl:Restriction ;
+            owl:allValuesFrom linkml:String ;
+            owl:onProperty sssom:creator_label ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Date ;
-            owl:onProperty pav:authoredOn ],
+            owl:onClass linkml:String ;
+            owl:onProperty sssom:subject_source_version ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:String ;
-            owl:onProperty sssom:mapping_tool ],
+            owl:onProperty owl:versionInfo ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:String ;
             owl:onProperty dcterms:description ],
         [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass sssom:EntityTypeEnum ;
-            owl:onProperty sssom:object_type ],
+            owl:allValuesFrom sssom:EntityReference ;
+            owl:onProperty sssom:object_match_field ],
         [ a owl:Restriction ;
-            owl:allValuesFrom sssom:Mapping ;
-            owl:onProperty sssom:mappings ],
+            owl:allValuesFrom sssom:EntityReference ;
+            owl:onProperty sssom:object_preprocessing ],
         [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:String ;
-            owl:onProperty sssom:subject_source_version ],
+            owl:onClass linkml:Uri ;
+            owl:onProperty sssom:mapping_set_id ;
+            owl:qualifiedCardinality 1 ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:String ;
-            owl:onProperty owl:versionInfo ],
+            owl:onProperty sssom:mapping_tool ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:String ;
             owl:onProperty sssom:object_source_version ],
         [ a owl:Restriction ;
-            owl:onClass linkml:Uri ;
-            owl:onProperty dcterms:license ;
-            owl:qualifiedCardinality 1 ],
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass sssom:EntityTypeEnum ;
+            owl:onProperty sssom:object_type ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:String ;
-            owl:onProperty rdfs:comment ],
+            owl:onProperty dcterms:title ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass sssom:EntityReference ;
-            owl:onProperty sssom:object_source ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:String ;
-            owl:onProperty sssom:creator_label ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom sssom:EntityReference ;
-            owl:onProperty sssom:subject_match_field ],
+            owl:onProperty sssom:subject_source ],
         [ a owl:Restriction ;
-            owl:allValuesFrom sssom:EntityReference ;
-            owl:onProperty sssom:object_match_field ],
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:String ;
+            owl:onProperty rdfs:comment ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:String ;
@@ -149,31 +145,35 @@ sssom:MappingSet a owl:Class,
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass sssom:EntityReference ;
-            owl:onProperty sssom:subject_source ],
+            owl:onProperty sssom:object_source ],
         [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:String ;
-            owl:onProperty dcterms:title ],
+            owl:allValuesFrom sssom:EntityReference ;
+            owl:onProperty sssom:subject_preprocessing ],
+        [ a owl:Restriction ;
+            owl:allValuesFrom sssom:Mapping ;
+            owl:onProperty sssom:mappings ],
         [ a owl:Restriction ;
             owl:onClass linkml:Uri ;
-            owl:onProperty sssom:mapping_set_id ;
+            owl:onProperty dcterms:license ;
             owl:qualifiedCardinality 1 ],
         [ a owl:Restriction ;
-            owl:allValuesFrom sssom:EntityReference ;
-            owl:onProperty sssom:subject_preprocessing ],
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass sssom:EntityTypeEnum ;
+            owl:onProperty sssom:subject_type ],
         [ a owl:Restriction ;
-            owl:allValuesFrom linkml:Uri ;
-            owl:onProperty prov:wasDerivedFrom ],
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:Uri ;
+            owl:onProperty sssom:mapping_provider ],
         [ a owl:Restriction ;
-            owl:allValuesFrom sssom:EntityReference ;
-            owl:onProperty dcterms:creator ],
+            owl:allValuesFrom linkml:String ;
+            owl:onProperty rdfs:seeAlso ],
         [ a owl:Restriction ;
             owl:allValuesFrom sssom:EntityReference ;
-            owl:onProperty sssom:object_preprocessing ],
+            owl:onProperty sssom:subject_match_field ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass sssom:EntityTypeEnum ;
-            owl:onProperty sssom:subject_type ] ;
+            owl:onClass linkml:Date ;
+            owl:onProperty pav:authoredOn ] ;
     skos:definition "Represents a set of mappings" .
 
 sssom:author_label a owl:ObjectProperty,
@@ -372,7 +372,7 @@ sssom:reviewer_label a owl:ObjectProperty,
         linkml:SlotDefinition ;
     rdfs:label "reviewer_label" ;
     rdfs:range linkml:String ;
-    skos:definition "A string identifying the reviewer of this mapping. In the spirit of provenance, consider to use author_id instead." .
+    skos:definition "A string identifying the reviewer of this mapping. In the spirit of provenance, consider to use reviewer_id instead." .
 
 sssom:semantic_similarity_measure a owl:ObjectProperty,
         linkml:SlotDefinition ;
@@ -676,159 +676,159 @@ sssom:Mapping a owl:Class,
         linkml:ClassDefinition ;
     rdfs:label "mapping" ;
     rdfs:subClassOf [ a owl:Restriction ;
-            owl:onClass sssom:EntityReference ;
-            owl:onProperty owl:annotatedTarget ;
-            owl:qualifiedCardinality 1 ],
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:Date ;
+            owl:onProperty pav:authoredOn ],
+        [ a owl:Restriction ;
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:Uri ;
+            owl:onProperty dcterms:license ],
         [ a owl:Restriction ;
             owl:allValuesFrom linkml:String ;
-            owl:onProperty sssom:reviewer_label ],
+            owl:onProperty rdfs:seeAlso ],
+        [ a owl:Restriction ;
+            owl:allValuesFrom sssom:EntityReference ;
+            owl:onProperty sssom:object_preprocessing ],
+        [ a owl:Restriction ;
+            owl:allValuesFrom linkml:String ;
+            owl:onProperty sssom:creator_label ],
+        [ a owl:Restriction ;
+            owl:allValuesFrom sssom:EntityReference ;
+            owl:onProperty dcterms:creator ],
+        [ a owl:Restriction ;
+            owl:allValuesFrom linkml:String ;
+            owl:onProperty sssom:match_string ],
+        [ a owl:Restriction ;
+            owl:onClass sssom:EntityReference ;
+            owl:onProperty owl:annotatedSource ;
+            owl:qualifiedCardinality 1 ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:String ;
             owl:onProperty sssom:subject_category ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:String ;
-            owl:onProperty sssom:object_category ],
+            owl:onClass linkml:Double ;
+            owl:onProperty sssom:confidence ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass sssom:EntityReference ;
             owl:onProperty sssom:mapping_source ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Double ;
-            owl:onProperty sssom:confidence ],
+            owl:onClass linkml:String ;
+            owl:onProperty sssom:other ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Date ;
-            owl:onProperty pav:authoredOn ],
+            owl:onClass linkml:String ;
+            owl:onProperty sssom:mapping_tool ],
         [ a owl:Restriction ;
             owl:allValuesFrom sssom:EntityReference ;
-            owl:onProperty sssom:reviewer_id ],
+            owl:onProperty sssom:object_match_field ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Uri ;
-            owl:onProperty sssom:mapping_provider ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom sssom:EntityReference ;
-            owl:onProperty sssom:object_match_field ],
+            owl:onClass linkml:String ;
+            owl:onProperty sssom:object_label ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass sssom:EntityTypeEnum ;
-            owl:onProperty sssom:subject_type ],
+            owl:onClass linkml:String ;
+            owl:onProperty sssom:subject_label ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass sssom:EntityReference ;
-            owl:onProperty sssom:object_source ],
+            owl:onProperty sssom:subject_source ],
+        [ a owl:Restriction ;
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:String ;
+            owl:onProperty sssom:semantic_similarity_measure ],
+        [ a owl:Restriction ;
+            owl:allValuesFrom sssom:EntityReference ;
+            owl:onProperty sssom:reviewer_id ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass sssom:MappingCardinalityEnum ;
             owl:onProperty sssom:mapping_cardinality ],
         [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:String ;
-            owl:onProperty sssom:subject_label ],
+            owl:allValuesFrom linkml:String ;
+            owl:onProperty sssom:reviewer_label ],
         [ a owl:Restriction ;
             owl:onClass sssom:EntityReference ;
-            owl:onProperty owl:annotatedSource ;
+            owl:onProperty sssom:mapping_justification ;
             owl:qualifiedCardinality 1 ],
         [ a owl:Restriction ;
-            owl:allValuesFrom linkml:String ;
-            owl:onProperty rdfs:seeAlso ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom sssom:EntityReference ;
-            owl:onProperty sssom:object_preprocessing ],
+            owl:onClass sssom:EntityReference ;
+            owl:onProperty owl:annotatedProperty ;
+            owl:qualifiedCardinality 1 ],
         [ a owl:Restriction ;
-            owl:allValuesFrom linkml:String ;
-            owl:onProperty sssom:creator_label ],
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass sssom:EntityReference ;
+            owl:onProperty sssom:object_source ],
         [ a owl:Restriction ;
-            owl:allValuesFrom linkml:String ;
-            owl:onProperty sssom:match_string ],
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass sssom:EntityTypeEnum ;
+            owl:onProperty sssom:object_type ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:String ;
-            owl:onProperty sssom:semantic_similarity_measure ],
+            owl:onProperty sssom:subject_source_version ],
+        [ a owl:Restriction ;
+            owl:allValuesFrom sssom:EntityReference ;
+            owl:onProperty sssom:curation_rule ],
         [ a owl:Restriction ;
             owl:allValuesFrom sssom:EntityReference ;
             owl:onProperty pav:authoredBy ],
         [ a owl:Restriction ;
             owl:onClass sssom:EntityReference ;
-            owl:onProperty sssom:mapping_justification ;
+            owl:onProperty owl:annotatedTarget ;
             owl:qualifiedCardinality 1 ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:String ;
-            owl:onProperty sssom:mapping_tool_version ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom sssom:EntityReference ;
-            owl:onProperty sssom:subject_preprocessing ],
+            owl:onClass sssom:EntityTypeEnum ;
+            owl:onProperty sssom:subject_type ],
         [ a owl:Restriction ;
             owl:allValuesFrom linkml:String ;
             owl:onProperty sssom:curation_rule_text ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:String ;
-            owl:onProperty sssom:mapping_tool ],
-        [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass sssom:EntityReference ;
-            owl:onProperty sssom:subject_source ],
-        [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:String ;
-            owl:onProperty sssom:object_source_version ],
+            owl:onProperty sssom:mapping_tool_version ],
         [ a owl:Restriction ;
             owl:allValuesFrom sssom:EntityReference ;
-            owl:onProperty sssom:curation_rule ],
+            owl:onProperty sssom:subject_preprocessing ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:String ;
-            owl:onProperty sssom:other ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:String ;
-            owl:onProperty sssom:author_label ],
-        [ a owl:Restriction ;
-            owl:onClass sssom:EntityReference ;
-            owl:onProperty owl:annotatedProperty ;
-            owl:qualifiedCardinality 1 ],
-        [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Uri ;
-            owl:onProperty dcterms:license ],
+            owl:onProperty sssom:object_category ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:String ;
-            owl:onProperty sssom:subject_source_version ],
+            owl:onClass sssom:PredicateModifierEnum ;
+            owl:onProperty sssom:predicate_modifier ],
         [ a owl:Restriction ;
             owl:allValuesFrom sssom:EntityReference ;
             owl:onProperty sssom:subject_match_field ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass sssom:EntityTypeEnum ;
-            owl:onProperty sssom:object_type ],
+            owl:onClass linkml:String ;
+            owl:onProperty rdfs:comment ],
         [ a owl:Restriction ;
-            owl:allValuesFrom sssom:EntityReference ;
-            owl:onProperty dcterms:creator ],
+            owl:allValuesFrom linkml:String ;
+            owl:onProperty sssom:author_label ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:String ;
             owl:onProperty sssom:predicate_label ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:String ;
-            owl:onProperty rdfs:comment ],
+            owl:onClass linkml:Uri ;
+            owl:onProperty sssom:mapping_provider ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:Double ;
             owl:onProperty sssom:semantic_similarity_score ],
-        [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass sssom:PredicateModifierEnum ;
-            owl:onProperty sssom:predicate_modifier ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:String ;
-            owl:onProperty sssom:object_label ] ;
+            owl:onProperty sssom:object_source_version ] ;
     skos:definition "Represents an individual mapping between a pair of entities" ;
     skos:exactMatch owl:Axiom .
 
@@ -837,28 +837,28 @@ sssom:MappingSetReference a owl:Class,
     rdfs:label "mapping set reference" ;
     rdfs:subClassOf [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:String ;
-            owl:onProperty sssom:mapping_set_group ],
-        [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:String ;
-            owl:onProperty sssom:local_name ],
+            owl:onClass linkml:Date ;
+            owl:onProperty sssom:last_updated ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:Double ;
             owl:onProperty sssom:registry_confidence ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Uri ;
-            owl:onProperty sssom:mirror_from ],
+            owl:onClass linkml:String ;
+            owl:onProperty sssom:local_name ],
+        [ a owl:Restriction ;
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:String ;
+            owl:onProperty sssom:mapping_set_group ],
         [ a owl:Restriction ;
             owl:onClass linkml:Uri ;
             owl:onProperty sssom:mapping_set_id ;
             owl:qualifiedCardinality 1 ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Date ;
-            owl:onProperty sssom:last_updated ] ;
+            owl:onClass linkml:Uri ;
+            owl:onProperty sssom:mirror_from ] ;
     skos:definition "A reference to a mapping set. It allows to augment mapping set metadata from the perspective of the registry, for example, providing confidence, or a local filename or a grouping." .
 
 sssom:PredicateModifierEnum a owl:Class,
diff --git a/project/prefixmap/sssom_schema.yaml b/project/prefixmap/sssom_schema.yaml
index a2d4f83d..be132d63 100644
--- a/project/prefixmap/sssom_schema.yaml
+++ b/project/prefixmap/sssom_schema.yaml
@@ -8,7 +8,7 @@
    "prov": "http://www.w3.org/ns/prov#",
    "rdf": "http://www.w3.org/1999/02/22-rdf-syntax-ns#",
    "rdfs": "http://www.w3.org/2000/01/rdf-schema#",
-   "semapv": "https://w3id.org/semapv/",
+   "semapv": "https://w3id.org/semapv/vocab/",
    "skos": "http://www.w3.org/2004/02/skos/core#",
    "sssom": "https://w3id.org/sssom/",
    "Mapping": {
diff --git a/project/shacl/sssom_schema.shacl.ttl b/project/shacl/sssom_schema.shacl.ttl
index 13b17218..da41ce5e 100644
--- a/project/shacl/sssom_schema.shacl.ttl
+++ b/project/shacl/sssom_schema.shacl.ttl
@@ -13,73 +13,64 @@ sssom:MappingRegistry a sh:NodeShape ;
     sh:closed true ;
     sh:description "A registry for managing mapping sets. It holds a set of mapping set references, and can import other registries." ;
     sh:ignoredProperties ( rdf:type ) ;
-    sh:property [ sh:class sssom:MappingSetReference ;
+    sh:property [ sh:description "A URL to the documentation of this mapping commons." ;
+            sh:maxCount 1 ;
+            sh:order 5 ;
+            sh:path sssom:documentation ],
+        [ sh:description "A URL to a homepage of this mapping commons." ;
+            sh:maxCount 1 ;
+            sh:order 6 ;
+            sh:path sssom:homepage ],
+        [ sh:class sssom:MappingSetReference ;
             sh:description "A list of mapping set references." ;
             sh:nodeKind sh:BlankNode ;
             sh:order 4 ;
             sh:path sssom:mapping_set_references ],
-        [ sh:description "The description of a mapping registry." ;
-            sh:maxCount 1 ;
-            sh:order 2 ;
-            sh:path sssom:mapping_registry_description ],
-        [ sh:description "The title of a mapping registry." ;
-            sh:maxCount 1 ;
-            sh:order 1 ;
-            sh:path sssom:mapping_registry_title ],
         [ sh:description "The unique identifier of a mapping registry." ;
             sh:maxCount 1 ;
             sh:minCount 1 ;
             sh:order 0 ;
             sh:path sssom:mapping_registry_id ],
-        [ sh:description "A URL to a homepage of this mapping commons." ;
+        [ sh:description "The title of a mapping registry." ;
             sh:maxCount 1 ;
-            sh:order 6 ;
-            sh:path sssom:homepage ],
+            sh:order 1 ;
+            sh:path sssom:mapping_registry_title ],
+        [ sh:description "The description of a mapping registry." ;
+            sh:maxCount 1 ;
+            sh:order 2 ;
+            sh:path sssom:mapping_registry_description ],
         [ sh:description "A list of registries that should be imported into this one." ;
             sh:order 3 ;
-            sh:path sssom:imports ],
-        [ sh:description "A URL to the documentation of this mapping commons." ;
-            sh:maxCount 1 ;
-            sh:order 5 ;
-            sh:path sssom:documentation ] ;
+            sh:path sssom:imports ] ;
     sh:targetClass sssom:MappingRegistry .
 
 sssom:MappingSet a sh:NodeShape ;
     sh:closed true ;
     sh:description "Represents a set of mappings" ;
     sh:ignoredProperties ( rdf:type ) ;
-    sh:property [ sh:description "URI of ontology source for the subject." ;
-            sh:maxCount 1 ;
-            sh:order 10 ;
-            sh:path sssom:subject_source ],
-        [ sh:description "The display name of a mapping set." ;
-            sh:maxCount 1 ;
-            sh:order 4 ;
-            sh:path dcterms:title ],
-        [ sh:description "Version IRI or version string of the source of the subject term." ;
+    sh:property [ sh:description "Version IRI or version string of the source of the subject term." ;
             sh:maxCount 1 ;
             sh:order 11 ;
             sh:path sssom:subject_source_version ],
-        [ sh:description "A string identifying the creator of this mapping. In the spirit of provenance, consider to use creator_id instead." ;
-            sh:order 7 ;
-            sh:path sssom:creator_label ],
-        [ sh:description "A tuple of fields (term annotations on the subject) that was used for the match." ;
-            sh:order 18 ;
-            sh:path sssom:subject_match_field ],
         [ sh:description "A tuple of fields (term annotations on the object) that was used for the match." ;
             sh:order 19 ;
             sh:path sssom:object_match_field ],
-        [ sh:description "A URL specific for the mapping instance. E.g. for kboom we have a per-mapping image that shows surrounding axioms that drive probability. Could also be a github issue URL that discussed a complicated alignment" ;
-            sh:order 22 ;
-            sh:path rdfs:seeAlso ],
-        [ sh:description "A reference to the tool or algorithm that was used to generate the mapping. Should be a URL pointing to more info about it, but can be free text." ;
+        [ sh:description "Method of preprocessing applied to the fields of the subject. If different preprocessing steps were performed on different fields, it is recommended to store the match in separate rows." ;
+            sh:order 20 ;
+            sh:path sssom:subject_preprocessing ],
+        [ sh:description "A url to the license of the mapping. In absence of a license we assume no license." ;
             sh:maxCount 1 ;
-            sh:order 16 ;
-            sh:path sssom:mapping_tool ],
-        [ sh:description "A description of the mapping set." ;
+            sh:minCount 1 ;
+            sh:order 8 ;
+            sh:path dcterms:license ],
+        [ sh:description "The display name of a mapping set." ;
             sh:maxCount 1 ;
-            sh:order 5 ;
-            sh:path dcterms:description ],
+            sh:order 4 ;
+            sh:path dcterms:title ],
+        [ sh:description "Version IRI or version string of the source of the object term." ;
+            sh:maxCount 1 ;
+            sh:order 14 ;
+            sh:path sssom:object_source_version ],
         [ sh:description "A mapping set or set of mapping set that was used to derive the mapping set." ;
             sh:order 3 ;
             sh:path prov:wasDerivedFrom ],
@@ -87,164 +78,119 @@ sssom:MappingSet a sh:NodeShape ;
             sh:maxCount 1 ;
             sh:order 23 ;
             sh:path sssom:other ],
-        [ sh:description "Identifies the persons or groups responsible for the creation of the mapping. The creator is the agent that put the mapping in its published form, which may be different from the author, which is a person that was actively involved in the assertion of the mapping. Recommended to be a (pipe-separated) list of ORCIDs or otherwise identifying URLs, but any identifying string (such as name and affiliation) is permissible." ;
-            sh:order 6 ;
-            sh:path dcterms:creator ],
-        [ sh:description "Free text field containing either curator notes or text generated by tool providing additional informative information." ;
-            sh:maxCount 1 ;
-            sh:order 24 ;
-            sh:path rdfs:comment ],
-        [ sh:description "Method of preprocessing applied to the fields of the object. If different preprocessing steps were performed on different fields, it is recommended to store the match in separate rows." ;
-            sh:order 21 ;
-            sh:path sssom:object_preprocessing ],
         [ sh:class owl:Axiom ;
             sh:description "Contains a list of mapping objects" ;
             sh:nodeKind sh:BlankNode ;
             sh:order 0 ;
             sh:path sssom:mappings ],
-        [ sh:description "Method of preprocessing applied to the fields of the subject. If different preprocessing steps were performed on different fields, it is recommended to store the match in separate rows." ;
-            sh:order 20 ;
-            sh:path sssom:subject_preprocessing ],
-        [ sh:description "A url to the license of the mapping. In absence of a license we assume no license." ;
+        [ sh:description "A string identifying the creator of this mapping. In the spirit of provenance, consider to use creator_id instead." ;
+            sh:order 7 ;
+            sh:path sssom:creator_label ],
+        [ sh:description "Free text field containing either curator notes or text generated by tool providing additional informative information." ;
             sh:maxCount 1 ;
-            sh:minCount 1 ;
-            sh:order 8 ;
-            sh:path dcterms:license ],
+            sh:order 24 ;
+            sh:path rdfs:comment ],
+        [ sh:description "A description of the mapping set." ;
+            sh:maxCount 1 ;
+            sh:order 5 ;
+            sh:path dcterms:description ],
+        [ sh:description "URI of ontology source for the subject." ;
+            sh:maxCount 1 ;
+            sh:order 10 ;
+            sh:path sssom:subject_source ],
         [ sh:description "URL pointing to the source that provided the mapping, for example an ontology that already contains the mappings, or a database from which it was derived." ;
             sh:maxCount 1 ;
             sh:order 15 ;
             sh:path sssom:mapping_provider ],
-        [ sh:description "Version IRI or version string of the source of the object term." ;
+        [ sh:description "Method of preprocessing applied to the fields of the object. If different preprocessing steps were performed on different fields, it is recommended to store the match in separate rows." ;
+            sh:order 21 ;
+            sh:path sssom:object_preprocessing ],
+        [ sh:description "Identifies the persons or groups responsible for the creation of the mapping. The creator is the agent that put the mapping in its published form, which may be different from the author, which is a person that was actively involved in the assertion of the mapping. Recommended to be a (pipe-separated) list of ORCIDs or otherwise identifying URLs, but any identifying string (such as name and affiliation) is permissible." ;
+            sh:order 6 ;
+            sh:path dcterms:creator ],
+        [ sh:description "A reference to the tool or algorithm that was used to generate the mapping. Should be a URL pointing to more info about it, but can be free text." ;
             sh:maxCount 1 ;
-            sh:order 14 ;
-            sh:path sssom:object_source_version ],
+            sh:order 16 ;
+            sh:path sssom:mapping_tool ],
         [ sh:description "IRI of ontology source for the object. Version IRI preferred." ;
             sh:maxCount 1 ;
             sh:order 13 ;
             sh:path sssom:object_source ],
-        [ sh:description "A globally unique identifier for the mapping set (not each individual mapping). Should be IRI, ideally resolvable." ;
-            sh:maxCount 1 ;
-            sh:minCount 1 ;
-            sh:order 1 ;
-            sh:path sssom:mapping_set_id ],
-        [ sh:description "A version string for the mapping." ;
-            sh:maxCount 1 ;
-            sh:order 2 ;
-            sh:path owl:versionInfo ],
-        [ sh:description "The date the mapping was asserted. This is different from the date the mapping was published or compiled in a SSSOM file." ;
-            sh:maxCount 1 ;
-            sh:order 17 ;
-            sh:path pav:authoredOn ],
+        [ sh:description "A tuple of fields (term annotations on the subject) that was used for the match." ;
+            sh:order 18 ;
+            sh:path sssom:subject_match_field ],
         [ sh:description "The type of entity that is being mapped." ;
             sh:in ( owl:Class owl:ObjectProperty owl:DataProperty owl:AnnotationProperty owl:NamedIndividual skos:Concept rdfs:Resource rdfs:Class rdfs:Literal rdfs:Datatype rdf:Property ) ;
             sh:maxCount 1 ;
             sh:order 9 ;
             sh:path sssom:subject_type ],
+        [ sh:description "A version string for the mapping." ;
+            sh:maxCount 1 ;
+            sh:order 2 ;
+            sh:path owl:versionInfo ],
         [ sh:description "The type of entity that is being mapped." ;
             sh:in ( owl:Class owl:ObjectProperty owl:DataProperty owl:AnnotationProperty owl:NamedIndividual skos:Concept rdfs:Resource rdfs:Class rdfs:Literal rdfs:Datatype rdf:Property ) ;
             sh:maxCount 1 ;
             sh:order 12 ;
-            sh:path sssom:object_type ] ;
+            sh:path sssom:object_type ],
+        [ sh:description "A URL specific for the mapping instance. E.g. for kboom we have a per-mapping image that shows surrounding axioms that drive probability. Could also be a github issue URL that discussed a complicated alignment" ;
+            sh:order 22 ;
+            sh:path rdfs:seeAlso ],
+        [ sh:description "A globally unique identifier for the mapping set (not each individual mapping). Should be IRI, ideally resolvable." ;
+            sh:maxCount 1 ;
+            sh:minCount 1 ;
+            sh:order 1 ;
+            sh:path sssom:mapping_set_id ],
+        [ sh:description "The date the mapping was asserted. This is different from the date the mapping was published or compiled in a SSSOM file." ;
+            sh:maxCount 1 ;
+            sh:order 17 ;
+            sh:path pav:authoredOn ] ;
     sh:targetClass sssom:MappingSet .
 
 owl:Axiom a sh:NodeShape ;
     sh:closed true ;
     sh:description "Represents an individual mapping between a pair of entities" ;
     sh:ignoredProperties ( rdf:type ) ;
-    sh:property [ sh:description "The conceptual category to which the subject belongs to. This can be a string denoting the category or a term from a controlled vocabulary. This slot is deliberately underspecified. Conceptual categories can range from those that are found in general upper ontologies such as BFO (e.g. process, temporal region, etc) to those that serve as upper ontologies in specific domains, such as COB or BioLink (e.g. gene, disease, chemical entity). The purpose of this optional field is documentation for human reviewers - when a category is known and documented clearly, the cost of interpreting and evaluating the mapping decreases." ;
-            sh:maxCount 1 ;
-            sh:order 2 ;
-            sh:path sssom:subject_category ],
-        [ sh:description "URI of ontology source for the subject." ;
-            sh:maxCount 1 ;
-            sh:order 18 ;
-            sh:path sssom:subject_source ],
-        [ sh:description "Version IRI or version string of the source of the subject term." ;
-            sh:maxCount 1 ;
-            sh:order 19 ;
-            sh:path sssom:subject_source_version ],
-        [ sh:description "The date the mapping was asserted. This is different from the date the mapping was published or compiled in a SSSOM file." ;
-            sh:maxCount 1 ;
-            sh:order 28 ;
-            sh:path pav:authoredOn ],
-        [ sh:description "Pipe separated list of key value pairs for properties not part of the SSSOM spec. Can be used to encode additional provenance data." ;
-            sh:maxCount 1 ;
-            sh:order 40 ;
-            sh:path sssom:other ],
-        [ sh:description "Free text field containing either curator notes or text generated by tool providing additional informative information." ;
-            sh:maxCount 1 ;
-            sh:order 41 ;
-            sh:path rdfs:comment ],
-        [ sh:description "The type of entity that is being mapped." ;
-            sh:in ( owl:Class owl:ObjectProperty owl:DataProperty owl:AnnotationProperty owl:NamedIndividual skos:Concept rdfs:Resource rdfs:Class rdfs:Literal rdfs:Datatype rdf:Property ) ;
+    sh:property [ sh:description "A score between 0 and 1 to denote the confidence or probability that the match is correct, where 1 denotes total confidence." ;
             sh:maxCount 1 ;
-            sh:order 20 ;
-            sh:path sssom:object_type ],
-        [ sh:description "A curation rule is a (potentially) complex condition executed by an agent that led to the establishment of a mapping. Curation rules often involve complex domain-specific considerations, which are hard to capture in an automated fashion. The curation rule should be captured as a resource (entity reference) rather than a string (see curation_rule element), which enables higher levels of transparency and sharing across mapping sets. The textual representation of curation rule is intended to be used in cases where (1) the creation of a resource is not practical from the perspective of the mapping_provider and (2) as an additional piece of metadata to augment the curation_rule element with a human readable text." ;
-            sh:order 31 ;
-            sh:path sssom:curation_rule_text ],
-        [ sh:description "A mapping justification is an action (or the written representation of that action) of showing a mapping to be right or reasonable." ;
+            sh:order 29 ;
+            sh:path sssom:confidence ],
+        [ sh:description "A reference to the tool or algorithm that was used to generate the mapping. Should be a URL pointing to more info about it, but can be free text." ;
             sh:maxCount 1 ;
-            sh:minCount 1 ;
-            sh:order 9 ;
-            sh:path sssom:mapping_justification ;
-            sh:pattern "^semapv:(MappingReview|ManualMappingCuration|LogicalReasoning|LexicalMatching|CompositeMatching|UnspecifiedMatching|SemanticSimilarityThresholdMatching|LexicalSimilarityThresholdMatching|MappingChaining)$" ],
+            sh:order 26 ;
+            sh:path sssom:mapping_tool ],
         [ sh:description "A string indicating whether this mapping is from a 1:1 (the subject_id maps to a single object_id), 1:n (the subject maps to more than one object_id), n:1, 1:0, 0:1 or n:n group. Note that this is a convenience field that should be derivable from the mapping set." ;
             sh:in ( "1:1" "1:n" "n:1" "1:0" "0:1" "n:n" ) ;
             sh:maxCount 1 ;
             sh:order 25 ;
             sh:path sssom:mapping_cardinality ],
-        [ sh:description "The ID of the object of the mapping." ;
+        [ sh:description "URL pointing to the source that provided the mapping, for example an ontology that already contains the mappings, or a database from which it was derived." ;
             sh:maxCount 1 ;
-            sh:minCount 1 ;
-            sh:order 6 ;
-            sh:path owl:annotatedTarget ],
+            sh:order 23 ;
+            sh:path sssom:mapping_provider ],
         [ sh:description "The label of the predicate/relation of the mapping" ;
             sh:maxCount 1 ;
             sh:order 4 ;
             sh:path sssom:predicate_label ],
+        [ sh:description "The date the mapping was asserted. This is different from the date the mapping was published or compiled in a SSSOM file." ;
+            sh:maxCount 1 ;
+            sh:order 28 ;
+            sh:path pav:authoredOn ],
         [ sh:description "IRI of ontology source for the object. Version IRI preferred." ;
             sh:maxCount 1 ;
             sh:order 21 ;
             sh:path sssom:object_source ],
-        [ sh:description "The ID of the predicate or relation that relates the subject and object of this match." ;
-            sh:maxCount 1 ;
-            sh:minCount 1 ;
-            sh:order 3 ;
-            sh:path owl:annotatedProperty ],
-        [ sh:description "A reference to the tool or algorithm that was used to generate the mapping. Should be a URL pointing to more info about it, but can be free text." ;
-            sh:maxCount 1 ;
-            sh:order 26 ;
-            sh:path sssom:mapping_tool ],
-        [ sh:description "Method of preprocessing applied to the fields of the subject. If different preprocessing steps were performed on different fields, it is recommended to store the match in separate rows." ;
-            sh:order 35 ;
-            sh:path sssom:subject_preprocessing ],
-        [ sh:description "The conceptual category to which the subject belongs to. This can be a string denoting the category or a term from a controlled vocabulary. This slot is deliberately underspecified. Conceptual categories can range from those that are found in general upper ontologies such as BFO (e.g. process, temporal region, etc) to those that serve as upper ontologies in specific domains, such as COB or BioLink (e.g. gene, disease, chemical entity). The purpose of this optional field is documentation for human reviewers - when a category is known and documented clearly, the cost of interpreting and evaluating the mapping decreases." ;
-            sh:maxCount 1 ;
-            sh:order 8 ;
-            sh:path sssom:object_category ],
-        [ sh:description "A string identifying the reviewer of this mapping. In the spirit of provenance, consider to use author_id instead." ;
-            sh:order 13 ;
-            sh:path sssom:reviewer_label ],
         [ sh:description "The label of object of the mapping" ;
             sh:maxCount 1 ;
             sh:order 7 ;
             sh:path sssom:object_label ],
-        [ sh:description "A curation rule is a (potentially) complex condition executed by an agent that led to the establishment of a mapping. Curation rules often involve complex domain-specific considerations, which are hard to capture in an automated fashion. The curation rule is captured as a resource rather than a string, which enables higher levels of transparency and sharing across mapping sets. The URI representation of the curation rule is expected to be a resolvable identifier which provides details about the nature of the curation rule." ;
-            sh:order 30 ;
-            sh:path sssom:curation_rule ],
-        [ sh:description "A URL specific for the mapping instance. E.g. for kboom we have a per-mapping image that shows surrounding axioms that drive probability. Could also be a github issue URL that discussed a complicated alignment" ;
-            sh:order 39 ;
-            sh:path rdfs:seeAlso ],
-        [ sh:description "The ID of the subject of the mapping." ;
-            sh:maxCount 1 ;
-            sh:minCount 1 ;
-            sh:order 0 ;
-            sh:path owl:annotatedSource ],
-        [ sh:description "A score between 0 and 1 to denote the confidence or probability that the match is correct, where 1 denotes total confidence." ;
+        [ sh:description "The measure used for computing the the semantic similarity score. To make processing this field as unambiguous as possible, we recommend using wikidata identifiers, but wikipedia pages could also be acceptable." ;
             sh:maxCount 1 ;
-            sh:order 29 ;
-            sh:path sssom:confidence ],
+            sh:order 38 ;
+            sh:path sssom:semantic_similarity_measure ],
+        [ sh:description "A curation rule is a (potentially) complex condition executed by an agent that led to the establishment of a mapping. Curation rules often involve complex domain-specific considerations, which are hard to capture in an automated fashion. The curation rule should be captured as a resource (entity reference) rather than a string (see curation_rule element), which enables higher levels of transparency and sharing across mapping sets. The textual representation of curation rule is intended to be used in cases where (1) the creation of a resource is not practical from the perspective of the mapping_provider and (2) as an additional piece of metadata to augment the curation_rule element with a human readable text." ;
+            sh:order 31 ;
+            sh:path sssom:curation_rule_text ],
         [ sh:description "A string identifying the author of this mapping. In the spirit of provenance, consider to use author_id instead." ;
             sh:order 11 ;
             sh:path sssom:author_label ],
@@ -252,64 +198,118 @@ owl:Axiom a sh:NodeShape ;
             sh:maxCount 1 ;
             sh:order 27 ;
             sh:path sssom:mapping_tool_version ],
-        [ sh:description "A score between 0 and 1 to denote the semantic similarity, where 1 denotes equivalence." ;
+        [ sh:description "A URL specific for the mapping instance. E.g. for kboom we have a per-mapping image that shows surrounding axioms that drive probability. Could also be a github issue URL that discussed a complicated alignment" ;
+            sh:order 39 ;
+            sh:path rdfs:seeAlso ],
+        [ sh:description "Pipe separated list of key value pairs for properties not part of the SSSOM spec. Can be used to encode additional provenance data." ;
             sh:maxCount 1 ;
-            sh:order 37 ;
-            sh:path sssom:semantic_similarity_score ],
-        [ sh:description "Identifies the persons or groups responsible for the creation of the mapping. The creator is the agent that put the mapping in its published form, which may be different from the author, which is a person that was actively involved in the assertion of the mapping. Recommended to be a (pipe-separated) list of ORCIDs or otherwise identifying URLs, but any identifying string (such as name and affiliation) is permissible." ;
-            sh:order 14 ;
-            sh:path dcterms:creator ],
+            sh:order 40 ;
+            sh:path sssom:other ],
+        [ sh:description "The label of subject of the mapping" ;
+            sh:maxCount 1 ;
+            sh:order 1 ;
+            sh:path sssom:subject_label ],
+        [ sh:description "A curation rule is a (potentially) complex condition executed by an agent that led to the establishment of a mapping. Curation rules often involve complex domain-specific considerations, which are hard to capture in an automated fashion. The curation rule is captured as a resource rather than a string, which enables higher levels of transparency and sharing across mapping sets. The URI representation of the curation rule is expected to be a resolvable identifier which provides details about the nature of the curation rule." ;
+            sh:order 30 ;
+            sh:path sssom:curation_rule ],
         [ sh:description "Method of preprocessing applied to the fields of the object. If different preprocessing steps were performed on different fields, it is recommended to store the match in separate rows." ;
             sh:order 36 ;
             sh:path sssom:object_preprocessing ],
+        [ sh:description "Free text field containing either curator notes or text generated by tool providing additional informative information." ;
+            sh:maxCount 1 ;
+            sh:order 41 ;
+            sh:path rdfs:comment ],
+        [ sh:description "The type of entity that is being mapped." ;
+            sh:in ( owl:Class owl:ObjectProperty owl:DataProperty owl:AnnotationProperty owl:NamedIndividual skos:Concept rdfs:Resource rdfs:Class rdfs:Literal rdfs:Datatype rdf:Property ) ;
+            sh:maxCount 1 ;
+            sh:order 20 ;
+            sh:path sssom:object_type ],
+        [ sh:description "A url to the license of the mapping. In absence of a license we assume no license." ;
+            sh:maxCount 1 ;
+            sh:order 16 ;
+            sh:path dcterms:license ],
+        [ sh:description "A string identifying the reviewer of this mapping. In the spirit of provenance, consider to use reviewer_id instead." ;
+            sh:order 13 ;
+            sh:path sssom:reviewer_label ],
+        [ sh:description "The ID of the object of the mapping." ;
+            sh:maxCount 1 ;
+            sh:minCount 1 ;
+            sh:order 6 ;
+            sh:path owl:annotatedTarget ],
         [ sh:description "Identifies the persons or groups responsible for asserting the mappings. Recommended to be a (pipe-separated) list of ORCIDs or otherwise identifying URLs, but any identifying string (such as name and affiliation) is permissible." ;
             sh:order 10 ;
             sh:path pav:authoredBy ],
-        [ sh:description "A tuple of fields (term annotations on the subject) that was used for the match." ;
-            sh:order 32 ;
-            sh:path sssom:subject_match_field ],
-        [ sh:description "A modifier for negating the prediate. See https://github.com/mapping-commons/sssom/issues/40 for discussion" ;
-            sh:in ( "Not" ) ;
+        [ sh:description "A mapping justification is an action (or the written representation of that action) of showing a mapping to be right or reasonable." ;
             sh:maxCount 1 ;
-            sh:order 5 ;
-            sh:path sssom:predicate_modifier ],
-        [ sh:description "URL pointing to the source that provided the mapping, for example an ontology that already contains the mappings, or a database from which it was derived." ;
+            sh:minCount 1 ;
+            sh:order 9 ;
+            sh:path sssom:mapping_justification ;
+            sh:pattern "^semapv:(MappingReview|ManualMappingCuration|LogicalReasoning|LexicalMatching|CompositeMatching|UnspecifiedMatching|SemanticSimilarityThresholdMatching|LexicalSimilarityThresholdMatching|MappingChaining)$" ],
+        [ sh:description "Method of preprocessing applied to the fields of the subject. If different preprocessing steps were performed on different fields, it is recommended to store the match in separate rows." ;
+            sh:order 35 ;
+            sh:path sssom:subject_preprocessing ],
+        [ sh:description "Version IRI or version string of the source of the subject term." ;
             sh:maxCount 1 ;
-            sh:order 23 ;
-            sh:path sssom:mapping_provider ],
-        [ sh:description "A string identifying the creator of this mapping. In the spirit of provenance, consider to use creator_id instead." ;
-            sh:order 15 ;
-            sh:path sssom:creator_label ],
-        [ sh:description "The label of subject of the mapping" ;
+            sh:order 19 ;
+            sh:path sssom:subject_source_version ],
+        [ sh:description "The type of entity that is being mapped." ;
+            sh:in ( owl:Class owl:ObjectProperty owl:DataProperty owl:AnnotationProperty owl:NamedIndividual skos:Concept rdfs:Resource rdfs:Class rdfs:Literal rdfs:Datatype rdf:Property ) ;
             sh:maxCount 1 ;
-            sh:order 1 ;
-            sh:path sssom:subject_label ],
+            sh:order 17 ;
+            sh:path sssom:subject_type ],
+        [ sh:description "Identifies the persons or groups that reviewed and confirmed the mapping. Recommended to be a (pipe-separated) list of ORCIDs or otherwise identifying URLs, but any identifying string (such as name and affiliation) is permissible." ;
+            sh:order 12 ;
+            sh:path sssom:reviewer_id ],
+        [ sh:description "The conceptual category to which the subject belongs to. This can be a string denoting the category or a term from a controlled vocabulary. This slot is deliberately underspecified. Conceptual categories can range from those that are found in general upper ontologies such as BFO (e.g. process, temporal region, etc) to those that serve as upper ontologies in specific domains, such as COB or BioLink (e.g. gene, disease, chemical entity). The purpose of this optional field is documentation for human reviewers - when a category is known and documented clearly, the cost of interpreting and evaluating the mapping decreases." ;
+            sh:maxCount 1 ;
+            sh:order 8 ;
+            sh:path sssom:object_category ],
+        [ sh:description "A tuple of fields (term annotations on the subject) that was used for the match." ;
+            sh:order 32 ;
+            sh:path sssom:subject_match_field ],
         [ sh:description "Version IRI or version string of the source of the object term." ;
             sh:maxCount 1 ;
             sh:order 22 ;
             sh:path sssom:object_source_version ],
-        [ sh:description "The measure used for computing the the semantic similarity score. To make processing this field as unambiguous as possible, we recommend using wikidata identifiers, but wikipedia pages could also be acceptable." ;
+        [ sh:description "A modifier for negating the prediate. See https://github.com/mapping-commons/sssom/issues/40 for discussion" ;
+            sh:in ( "Not" ) ;
             sh:maxCount 1 ;
-            sh:order 38 ;
-            sh:path sssom:semantic_similarity_measure ],
-        [ sh:description "The type of entity that is being mapped." ;
-            sh:in ( owl:Class owl:ObjectProperty owl:DataProperty owl:AnnotationProperty owl:NamedIndividual skos:Concept rdfs:Resource rdfs:Class rdfs:Literal rdfs:Datatype rdf:Property ) ;
+            sh:order 5 ;
+            sh:path sssom:predicate_modifier ],
+        [ sh:description "The conceptual category to which the subject belongs to. This can be a string denoting the category or a term from a controlled vocabulary. This slot is deliberately underspecified. Conceptual categories can range from those that are found in general upper ontologies such as BFO (e.g. process, temporal region, etc) to those that serve as upper ontologies in specific domains, such as COB or BioLink (e.g. gene, disease, chemical entity). The purpose of this optional field is documentation for human reviewers - when a category is known and documented clearly, the cost of interpreting and evaluating the mapping decreases." ;
             sh:maxCount 1 ;
-            sh:order 17 ;
-            sh:path sssom:subject_type ],
-        [ sh:description "A url to the license of the mapping. In absence of a license we assume no license." ;
+            sh:order 2 ;
+            sh:path sssom:subject_category ],
+        [ sh:description "The ID of the predicate or relation that relates the subject and object of this match." ;
             sh:maxCount 1 ;
-            sh:order 16 ;
-            sh:path dcterms:license ],
+            sh:minCount 1 ;
+            sh:order 3 ;
+            sh:path owl:annotatedProperty ],
+        [ sh:description "Identifies the persons or groups responsible for the creation of the mapping. The creator is the agent that put the mapping in its published form, which may be different from the author, which is a person that was actively involved in the assertion of the mapping. Recommended to be a (pipe-separated) list of ORCIDs or otherwise identifying URLs, but any identifying string (such as name and affiliation) is permissible." ;
+            sh:order 14 ;
+            sh:path dcterms:creator ],
         [ sh:description "A tuple of fields (term annotations on the object) that was used for the match." ;
             sh:order 33 ;
             sh:path sssom:object_match_field ],
+        [ sh:description "A string identifying the creator of this mapping. In the spirit of provenance, consider to use creator_id instead." ;
+            sh:order 15 ;
+            sh:path sssom:creator_label ],
+        [ sh:description "URI of ontology source for the subject." ;
+            sh:maxCount 1 ;
+            sh:order 18 ;
+            sh:path sssom:subject_source ],
         [ sh:description "Strings that are shared by subj/obj. It is recommended to indicate the fields for the match using the object and subject_match_field slots." ;
             sh:order 34 ;
             sh:path sssom:match_string ],
-        [ sh:description "Identifies the persons or groups that reviewed and confirmed the mapping. Recommended to be a (pipe-separated) list of ORCIDs or otherwise identifying URLs, but any identifying string (such as name and affiliation) is permissible." ;
-            sh:order 12 ;
-            sh:path sssom:reviewer_id ],
+        [ sh:description "The ID of the subject of the mapping." ;
+            sh:maxCount 1 ;
+            sh:minCount 1 ;
+            sh:order 0 ;
+            sh:path owl:annotatedSource ],
+        [ sh:description "A score between 0 and 1 to denote the semantic similarity, where 1 denotes equivalence." ;
+            sh:maxCount 1 ;
+            sh:order 37 ;
+            sh:path sssom:semantic_similarity_score ],
         [ sh:description "The mapping set this mapping was originally defined in. mapping_source is used for example when merging multiple mapping sets or deriving one mapping set from another." ;
             sh:maxCount 1 ;
             sh:order 24 ;
@@ -320,15 +320,7 @@ sssom:MappingSetReference a sh:NodeShape ;
     sh:closed true ;
     sh:description "A reference to a mapping set. It allows to augment mapping set metadata from the perspective of the registry, for example, providing confidence, or a local filename or a grouping." ;
     sh:ignoredProperties ( rdf:type ) ;
-    sh:property [ sh:description "The date this reference was last updated." ;
-            sh:maxCount 1 ;
-            sh:order 4 ;
-            sh:path sssom:last_updated ],
-        [ sh:description "A URL location from which to obtain a resource, such as a mapping set." ;
-            sh:maxCount 1 ;
-            sh:order 1 ;
-            sh:path sssom:mirror_from ],
-        [ sh:description "This value is set by the registry that indexes the mapping set. It reflects the confidence the registry has in the correctness of the mappings in the mapping set." ;
+    sh:property [ sh:description "This value is set by the registry that indexes the mapping set. It reflects the confidence the registry has in the correctness of the mappings in the mapping set." ;
             sh:maxCount 1 ;
             sh:order 2 ;
             sh:path sssom:registry_confidence ],
@@ -337,13 +329,21 @@ sssom:MappingSetReference a sh:NodeShape ;
             sh:minCount 1 ;
             sh:order 0 ;
             sh:path sssom:mapping_set_id ],
-        [ sh:description "The local name assigned to file that corresponds to the downloaded mapping set." ;
-            sh:maxCount 1 ;
-            sh:order 5 ;
-            sh:path sssom:local_name ],
         [ sh:description "Set by the owners of the mapping registry. A way to group ." ;
             sh:maxCount 1 ;
             sh:order 3 ;
-            sh:path sssom:mapping_set_group ] ;
+            sh:path sssom:mapping_set_group ],
+        [ sh:description "A URL location from which to obtain a resource, such as a mapping set." ;
+            sh:maxCount 1 ;
+            sh:order 1 ;
+            sh:path sssom:mirror_from ],
+        [ sh:description "The date this reference was last updated." ;
+            sh:maxCount 1 ;
+            sh:order 4 ;
+            sh:path sssom:last_updated ],
+        [ sh:description "The local name assigned to file that corresponds to the downloaded mapping set." ;
+            sh:maxCount 1 ;
+            sh:order 5 ;
+            sh:path sssom:local_name ] ;
     sh:targetClass sssom:MappingSetReference .
 
diff --git a/project/shex/sssom_schema.shex b/project/shex/sssom_schema.shex
index 1d724e2e..02319424 100644
--- a/project/shex/sssom_schema.shex
+++ b/project/shex/sssom_schema.shex
@@ -23,7 +23,7 @@ linkml:Double xsd:double
 
 linkml:Decimal xsd:decimal
 
-linkml:Time xsd:dateTime
+linkml:Time xsd:time
 
 linkml:Date xsd:date
 
diff --git a/src/sssom_schema/datamodel/sssom_schema.py b/src/sssom_schema/datamodel/sssom_schema.py
index 91610ce0..8dad9b75 100644
--- a/src/sssom_schema/datamodel/sssom_schema.py
+++ b/src/sssom_schema/datamodel/sssom_schema.py
@@ -1,5 +1,5 @@
 # Auto generated from sssom_schema.yaml by pythongen.py version: 0.9.0
-# Generation date: 2023-03-16T14:57:46
+# Generation date: 2023-06-11T14:18:34
 # Schema: sssom
 #
 # id: https://w3id.org/sssom/schema/
@@ -41,7 +41,7 @@
 PROV = CurieNamespace('prov', 'http://www.w3.org/ns/prov#')
 RDF = CurieNamespace('rdf', 'http://www.w3.org/1999/02/22-rdf-syntax-ns#')
 RDFS = CurieNamespace('rdfs', 'http://www.w3.org/2000/01/rdf-schema#')
-SEMAPV = CurieNamespace('semapv', 'https://w3id.org/semapv/')
+SEMAPV = CurieNamespace('semapv', 'https://w3id.org/semapv/vocab/')
 SKOS = CurieNamespace('skos', 'http://www.w3.org/2004/02/skos/core#')
 SSSOM = CurieNamespace('sssom', 'https://w3id.org/sssom/')
 DEFAULT_ = SSSOM