DESCRIPTION

Package: gread
Type: Package
Title: Fast Reading and Processing of Common Gene Annotation and Next 
        Generation Sequencing Format Files
Version: 0.99.2
Authors@R: c(
    person("Arunkumar", "Srinivasan", , "asrinivasan@openanalytics.eu", 
    c("aut", "cre")), person("Open Analytics", role = "cph"))
Maintainer: Arunkumar Srinivasan <asrinivasan@openanalytics.eu>
Depends:
    R (>= 3.3),
    GenomicRanges
Imports:
    stats,
    utils,
    methods,
    tools,
    data.table (>= 1.9.6),
    stringi,
    S4Vectors,
    Rsamtools,
    rtracklayer,
    IRanges,
    GenomicFeatures,
    GenomicAlignments
Suggests:
    knitr
Description: It allows for fast reading and processing of genome read and
    annotation files such as gtf/gff/bed/bam. In addition, it also provides
    functions for advanced manipulations such as filling missing intron 
    coordinates, extracting non-overlapping intron coordinates, extracting 
    overlapping genes etc.
License: GPL-3
LazyData: true
VignetteBuilder: knitr
RoxygenNote: 5.0.1
biocViews: Annotation, DataImport, Sequencing, RNASeq, Software, Coverage