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Get jellyfish dataset #2

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arkivm opened this issue Feb 27, 2020 · 2 comments
Open

Get jellyfish dataset #2

arkivm opened this issue Feb 27, 2020 · 2 comments
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arkivm commented Feb 27, 2020 •
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Collect all the samples specified in jellyfish paper to setup a baseline
@arkivm arkivm self-assigned this Feb 27, 2020
@arkivm arkivm added the documentation Improvements or additions to documentation label Feb 27, 2020
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arkivm commented Feb 27, 2020

M gallopavo
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2935454/bin/pbio.1000475.s001.doc

Homo Sapiens dataset
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2935454/
ftp://ftp.ncbi.nlm.nih.gov/genomes/Homo_sapiens/ARCHIVE/BUILD.37.3

Drosophila ananassae - ftp://ftp.flybase.net/genomes/Drosophila_ananassae/

Coxiella burnetii
https://www.ncbi.nlm.nih.gov/nuccore/NC_002971.4?report=fasta

Zea Mays
https://www.ncbi.nlm.nih.gov/genome/?term=Zea+mays

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M gallopavo dataset
https://www.ncbi.nlm.nih.gov/assembly/GCA_000146605.4
M gallopavo old dataset
https://www.ncbi.nlm.nih.gov/assembly/GCA_000146605.1/

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