v0.2.1

• updated tests.
• allow empty kraken reports for email.

karlmann

Major changes:

• kraken for contamination screens, with some updated organism features (viruses, bacterial contamination, ...)
• readthedocs
• flow cells without an index are possible

Minor changes:

• including docs link / build badges, and readme updates
• stripped env name in conda environment
• purge fastqscreen dependencies
• diskspace in periphery is included in the email
• precommit for flake8 test
• pytests include mask calculation for common use cases
• cleaned up 'float reporting' in mqc report & email.

docs

• initiate docs
• move exec to conda env
• init kraken/contaminome
• include wd40/tools
• includes email into exec + configs

ludwig

• replaced executables with entry points
• conda install
• versioning etc with pbr

v0.0.2

Tiny changes into:

• multiqc reports
• email sent

v0.0.1

Merge pull request #30 from maxplanck-ie/WD

pycov req