Similarity Processes

ProSim

In this directory is presented the tool ProSim, which allows users to compare processes (in the forme of a json file : output of Nextflow Analyzer) folowing different hypotheses. These different hypotheses are presente in the Jupyter notebook.

The results of Prosim are presented in different csv(s) files in the form of matrixes.

Install and Run

To install :

sudo python3 setup.py install

To run :

Single mode :

ProSim --mode "single" --results_directory "some/adress" --processA "address/to/json/A" --processB "address/to/json/B"

Multi mode :

ProSim --mode "multi" --results_directory "some/adress" --processes "address/to/the/json/of/the/processes/"