Error in rule kmc_to_genmatrix

[enricorox]

Hi!
Running your example $ essColorCompress -i list_mini_k18c4m7 -k 18 -o output_test/ -j 8 gives me the following error:

Error in rule kmc_to_genmatrix:
    jobid: 1
    output: col_bitmatrix, ess_boundary_bit.txt, stat_nkmer_ess, kb_sec_genmatrix
    shell:
        /usr/bin/time  -f "%M %e %U %S" --output-file=kb_sec_genmatrix genmatrix  -c list_kmc -o col_bitmatrix ess_boundary_bit.txt stat_nkmer_ess kb_sec_genmatrix -s -l mega.essd -k 18
        (one of the commands exited with non-zero exit code; note that snakemake uses bash strict mode!)

Is it because genmatrix does not exist in my path? Compilation did not make this executable

[enricorox]

This is probably caused by #8