From f43eea4db04cb34ec4b322fa007407a71450027e Mon Sep 17 00:00:00 2001
From: Bob Harris <rsharris@bx.psu.edu>
Date: Tue, 30 Oct 2018 15:30:55 -0400
Subject: [PATCH] bumped to version 1.0.0 in prep for making public; added
 license

---
 LICENSE            | 21 +++++++++++++++++++++
 README.md          |  2 ++
 cmd_version.h      |  8 ++++----
 tutorial/README.md |  5 ++++-
 4 files changed, 31 insertions(+), 5 deletions(-)
 create mode 100644 LICENSE

diff --git a/LICENSE b/LICENSE
new file mode 100644
index 0000000..17e50d4
--- /dev/null
+++ b/LICENSE
@@ -0,0 +1,21 @@
+MIT License
+
+Copyright (c) 2018 Robert S. Harris
+
+Permission is hereby granted, free of charge, to any person obtaining a copy
+of this software and associated documentation files (the "Software"), to deal
+in the Software without restriction, including without limitation the rights
+to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+copies of the Software, and to permit persons to whom the Software is
+furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in all
+copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+SOFTWARE.
diff --git a/README.md b/README.md
index 37f802d..0983b54 100644
--- a/README.md
+++ b/README.md
@@ -20,3 +20,5 @@ To install subutan from the source:
     cd HowDeSBT  
     make  
 ```
+3. A usage tutorial can be found at
+https://github.com/medvedevgroup/HowDeSBT/tree/master/tutorial
diff --git a/cmd_version.h b/cmd_version.h
index f13f227..1c61eae 100644
--- a/cmd_version.h
+++ b/cmd_version.h
@@ -11,10 +11,10 @@
 class VersionCommand: public Command
 	{
 public:
-	static const unsigned int  major    = 0;
-	static const unsigned int  minor    = 2;
-	static const unsigned int  subMinor = 4;
-	static const std::uint32_t date     = 0x20180419;
+	static const unsigned int  major    = 1;
+	static const unsigned int  minor    = 0;
+	static const unsigned int  subMinor = 0;
+	static const std::uint32_t date     = 0x20181030;
 
 public:
 	VersionCommand(const std::string& name): Command(name) {}
diff --git a/tutorial/README.md b/tutorial/README.md
index e020195..de60cf3 100644
--- a/tutorial/README.md
+++ b/tutorial/README.md
@@ -17,7 +17,10 @@ _Note that this size is an overestimate._ However, tests have shown that
 overestimating the Bloom filter size has only a minor effect on the overall
 HowDe-SBT file sizes and query times.
 
-Ntcard is available at https://github.com/bcgsc/ntCard.
+Version 1.0.1 of ntcard was used, fetched as follows:
+```bash  
+git clone https://github.com/bcgsc/ntCard --branch "1.0.1"
+```
 
 ### (2) Convert the fasta files to Bloom filter bit vectors.