From bc53d8f31a293db5c812c29b5b7242fb6b2a07f8 Mon Sep 17 00:00:00 2001 From: Ilya Minkin Date: Thu, 18 May 2017 16:47:50 -0400 Subject: [PATCH] Fixed version numbers --- README.md | 4 ++-- example/README.md | 2 +- src/graphconstructor/CMakeLists.txt | 2 +- src/graphconstructor/constructor.cpp | 2 +- src/graphdump/CMakeLists.txt | 2 +- src/graphdump/graphdump.cpp | 2 +- 6 files changed, 7 insertions(+), 7 deletions(-) diff --git a/README.md b/README.md index 3949995..f4d1a2e 100644 --- a/README.md +++ b/README.md @@ -1,6 +1,6 @@ -TwoPaCo 0.9.1 +TwoPaCo 0.9.2 -Release date: 29th March 2017 +Release date: 18th May 2017 ============================= Authors diff --git a/example/README.md b/example/README.md index 449297f..12cf77d 100644 --- a/example/README.md +++ b/example/README.md @@ -3,7 +3,7 @@ Introduction Here is an example of the de Bruijn graph built from a small input with k=11. Below are commands used to produce the files. Run TwoPaCo: - twopaco -f 20 -k 11 example.fa -o example1.dbg + twopaco -f 20 -k 11 example.fa -o example.dbg Get DOT file for Graphviz visualisation and render it: diff --git a/src/graphconstructor/CMakeLists.txt b/src/graphconstructor/CMakeLists.txt index 716399f..939b52d 100644 --- a/src/graphconstructor/CMakeLists.txt +++ b/src/graphconstructor/CMakeLists.txt @@ -13,4 +13,4 @@ target_link_libraries(twopaco "tbb") set(CPACK_PACKAGE_VERSION_MAJOR "0") set(CPACK_PACKAGE_VERSION_MINOR "9") -set(CPACK_PACKAGE_VERSION_PATCH "0") \ No newline at end of file +set(CPACK_PACKAGE_VERSION_PATCH "2") \ No newline at end of file diff --git a/src/graphconstructor/constructor.cpp b/src/graphconstructor/constructor.cpp index fee7617..4d003ef 100644 --- a/src/graphconstructor/constructor.cpp +++ b/src/graphconstructor/constructor.cpp @@ -55,7 +55,7 @@ int main(int argc, char * argv[]) OddConstraint constraint; try { - TCLAP::CmdLine cmd("Program for construction of the condensed de Bruijn graph from complete genomes", ' ', "0.9.0"); + TCLAP::CmdLine cmd("Program for construction of the condensed de Bruijn graph from complete genomes", ' ', "0.9.2"); TCLAP::ValueArg kvalue("k", "kvalue", diff --git a/src/graphdump/CMakeLists.txt b/src/graphdump/CMakeLists.txt index e4d5adc..fb88b1b 100644 --- a/src/graphdump/CMakeLists.txt +++ b/src/graphdump/CMakeLists.txt @@ -14,4 +14,4 @@ target_link_libraries(graphdump "tbb") set(CPACK_PACKAGE_VERSION_MAJOR "0") set(CPACK_PACKAGE_VERSION_MINOR "9") -set(CPACK_PACKAGE_VERSION_PATCH "0") \ No newline at end of file +set(CPACK_PACKAGE_VERSION_PATCH "2") \ No newline at end of file diff --git a/src/graphdump/graphdump.cpp b/src/graphdump/graphdump.cpp index f819af5..dd22d77 100644 --- a/src/graphdump/graphdump.cpp +++ b/src/graphdump/graphdump.cpp @@ -618,7 +618,7 @@ int main(int argc, char * argv[]) std::copy(format.begin(), format.begin(), std::ostream_iterator(formatString, "|")); try { - TCLAP::CmdLine cmd("This utility converts the binary output of TwoPaCo to another format", ' ', "0.9.0"); + TCLAP::CmdLine cmd("This utility converts the binary output of TwoPaCo to another format", ' ', "0.9.2"); TCLAP::SwitchArg prefix("", "prefix", "Add a prefix to segments in GFA (in case if you have genomes with identical FASTA headers)", cmd, false); TCLAP::UnlabeledValueArg inputFileName("infile",