From 98eb7ae8244389ce230eef77f5cdb90be836271f Mon Sep 17 00:00:00 2001 From: Silas Kieser Date: Fri, 12 May 2023 15:02:50 +0200 Subject: [PATCH] allways run dram on genomes --- workflow/config/template_config.yaml | 12 +++++++----- 1 file changed, 7 insertions(+), 5 deletions(-) diff --git a/workflow/config/template_config.yaml b/workflow/config/template_config.yaml index e08d1bbe..bf9ad11b 100644 --- a/workflow/config/template_config.yaml +++ b/workflow/config/template_config.yaml @@ -207,14 +207,12 @@ annotations: - gtdb_tree - gtdb_taxonomy - genes - # - kegg_modules - # - dram + - kegg_modules + - dram + -gene_annotations: - - eggNOG - # - dram ######################## # Gene catalog @@ -228,5 +226,9 @@ genecatalog: extra: " " SubsetSize: 500000 +gene_annotations: + - eggNOG + # - dram + eggNOG_use_virtual_disk: false # coping the eggNOG DB to a virtual disk can sppeed up the annotation virtual_disk: "/dev/shm" # But you need 37G extra ram