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Prokka Partial Genes #356

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pbelmann opened this issue Apr 22, 2024 · 0 comments
Open

Prokka Partial Genes #356

pbelmann opened this issue Apr 22, 2024 · 0 comments

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@pbelmann
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Prodigal usually marks partial genes with "partial" in a gff file. Prokka however does not add this tag. The only way to figure out if a gene is a partial gene or not is to parse the *.tbl files. Since this is quite difficult, we need a better solution.
If it is too difficult to add this information to the gff, it would also be fine to add a separate tsv file or expand the existing tsv file with this information.

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