forked from nipreps/nibabies
-
Notifications
You must be signed in to change notification settings - Fork 0
/
Copy pathrequirements.txt
316 lines (316 loc) · 5.42 KB
/
requirements.txt
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
#
# This file is autogenerated by pip-compile with Python 3.10
# by the following command:
#
# pip-compile --extra=telemetry --resolver=backtracking
#
astor==0.8.1
# via formulaic
attrs==23.1.0
# via
# niworkflows
# sdcflows
bids-validator==1.11.0
# via pybids
bokeh==2.2.3
# via tedana
certifi==2023.7.22
# via requests
charset-normalizer==3.1.0
# via requests
ci-info==0.3.0
# via
# etelemetry
# migas
click==8.1.3
# via
# nipype
# pybids
contourpy==1.1.0
# via matplotlib
cycler==0.11.0
# via matplotlib
cython==0.29.35
# via nitime
docopt==0.6.2
# via num2words
etelemetry==0.3.0
# via nipype
filelock==3.12.2
# via nipype
fonttools==4.40.0
# via matplotlib
formulaic==0.5.2
# via pybids
greenlet==2.0.2
# via sqlalchemy
h5py==3.9.0
# via nitransforms
idna==3.4
# via requests
imageio==2.31.1
# via scikit-image
importlib-resources==6.1.1
# via niworkflows
indexed-gzip==1.7.1
# via smriprep
interface-meta==1.3.0
# via formulaic
isodate==0.6.1
# via rdflib
jinja2==3.0.1
# via
# bokeh
# niworkflows
# tedana
joblib==1.3.1
# via
# nilearn
# scikit-learn
kiwisolver==1.4.4
# via matplotlib
lazy-loader==0.2
# via scikit-image
lockfile==0.12.2
# via smriprep
looseversion==1.2.0
# via
# nipype
# niworkflows
# smriprep
lxml==4.9.2
# via
# nilearn
# prov
# svgutils
mapca==0.0.3
# via tedana
markupsafe==2.1.3
# via jinja2
matplotlib==3.7.1
# via
# nitime
# niworkflows
# seaborn
# smriprep
# tedana
migas==0.4.0
# via nibabies (pyproject.toml)
networkx==3.1
# via
# nipype
# nitime
# prov
# scikit-image
nibabel==5.1.0
# via
# mapca
# nibabies (pyproject.toml)
# nilearn
# nipype
# nitime
# nitransforms
# niworkflows
# pybids
# sdcflows
# smriprep
# tedana
nilearn==0.10.1
# via
# mapca
# niworkflows
# tedana
nipype==1.8.6
# via
# nibabies (pyproject.toml)
# niworkflows
# sdcflows
# smriprep
nitime==0.10.1
# via nibabies (pyproject.toml)
nitransforms==23.0.1
# via
# nibabies (pyproject.toml)
# niworkflows
# sdcflows
niworkflows==1.9.0
# via
# nibabies (pyproject.toml)
# sdcflows
# smriprep
num2words==0.5.12
# via pybids
numpy==1.25.0
# via
# bokeh
# contourpy
# formulaic
# h5py
# imageio
# mapca
# matplotlib
# nibabel
# nibabies (pyproject.toml)
# nilearn
# nipype
# nitime
# nitransforms
# niworkflows
# pandas
# pybids
# pywavelets
# scikit-image
# scikit-learn
# scipy
# sdcflows
# seaborn
# smriprep
# tedana
# tifffile
packaging==23.1
# via
# bokeh
# matplotlib
# nibabel
# nibabies (pyproject.toml)
# nilearn
# nipype
# niworkflows
# scikit-image
# smriprep
pandas==2.0.3
# via
# formulaic
# nibabies (pyproject.toml)
# nilearn
# niworkflows
# pybids
# seaborn
# tedana
pillow==10.0.1
# via
# bokeh
# imageio
# matplotlib
# scikit-image
prov==2.0.0
# via nipype
psutil==5.9.5
# via nibabies (pyproject.toml)
pybids==0.16.1
# via
# nibabies (pyproject.toml)
# niworkflows
# sdcflows
# smriprep
# templateflow
pydot==1.4.2
# via nipype
pyparsing==3.1.0
# via
# matplotlib
# pydot
# rdflib
python-dateutil==2.8.2
# via
# bokeh
# matplotlib
# nipype
# pandas
# prov
pytz==2023.3
# via pandas
pywavelets==1.4.1
# via scikit-image
pyyaml==6.0
# via
# bokeh
# niworkflows
# smriprep
rdflib==6.3.2
# via
# nipype
# prov
requests==2.31.0
# via
# etelemetry
# nibabies (pyproject.toml)
# nilearn
# templateflow
scikit-image==0.21.0
# via
# niworkflows
# sdcflows
scikit-learn==1.2.2
# via
# mapca
# nilearn
# tedana
scipy==1.11.1
# via
# formulaic
# mapca
# nilearn
# nipype
# nitime
# nitransforms
# niworkflows
# pybids
# scikit-image
# scikit-learn
# sdcflows
# tedana
sdcflows==2.5.2
# via nibabies (pyproject.toml)
seaborn==0.12.2
# via niworkflows
simplejson==3.19.1
# via nipype
six==1.16.0
# via
# isodate
# python-dateutil
smriprep==0.12.2
# via nibabies (pyproject.toml)
sqlalchemy==2.0.17
# via pybids
svgutils==0.3.4
# via niworkflows
tedana==0.0.13
# via nibabies (pyproject.toml)
templateflow==23.0.0
# via
# nibabies (pyproject.toml)
# niworkflows
# sdcflows
# smriprep
threadpoolctl==3.1.0
# via
# scikit-learn
# tedana
tifffile==2023.4.12
# via scikit-image
toml==0.10.2
# via nibabies (pyproject.toml)
tornado==6.3.3
# via bokeh
tqdm==4.65.0
# via templateflow
traits==6.3.2
# via
# nipype
# niworkflows
# sdcflows
transforms3d==0.4.1
# via niworkflows
typing-extensions==4.7.0
# via
# bokeh
# formulaic
# sqlalchemy
tzdata==2023.3
# via pandas
urllib3==2.0.7
# via requests
wrapt==1.15.0
# via formulaic