diff --git a/inst/rs-settings/rstudio-prefs--rstudio-default.json b/inst/rs-settings/rstudio-prefs--rstudio-default.json
index d8bd5107..1b6b0947 100644
--- a/inst/rs-settings/rstudio-prefs--rstudio-default.json
+++ b/inst/rs-settings/rstudio-prefs--rstudio-default.json
@@ -2,6 +2,28 @@
     "allow_source_columns"                         : true,
     "always_enable_rnw_concordance"                : true,
     "always_save_history"                          : true,
+    "always_shown_extensions"                      : [
+      ".circleci",
+      ".gitattributes",
+      ".github",
+      ".gitignore",
+      ".httr-oauth",
+      ".lintr",
+      ".quartoignore",
+      ".r",
+      ".rbuildignore",
+      ".rdata",
+      ".renvignore",
+      ".renviron",
+      ".rhistory",
+      ".rprofile",
+      ".ruserdata"
+    ],
+    "always_shown_files"                           : [
+      ".build.yml",
+      ".gitlab-ci.yml",
+      ".travis.yml"
+    ],
     "ansi_console_mode"                            : "on",
     "auto_append_newline"                          : false,
     "auto_detect_indentation"                      : false,
@@ -13,9 +35,34 @@
     "auto_save_on_idle"                            : "backup",
     "background_diagnostics"                       : true,
     "background_diagnostics_delay_ms"              : 2000,
-    "bioconductor_mirror_name"                     : "Seattle (USA)",
-    "bioconductor_mirror_url"                      : "http://www.bioconductor.org",
     "blinking_cursor"                              : true,
+    "browser_fixed_width_fonts"                    : [
+      "Andale Mono",
+      "Bitstream Vera Sans Mono",
+      "Cascadia Code",
+      "Consolas",
+      "Courier New",
+      "Courier",
+      "DejaVu Sans Mono",
+      "Droid Sans Mono",
+      "Fira Code",
+      "Hack",
+      "IBM Plex Mono",
+      "Inconsolata",
+      "JetBrains Mono",
+      "Lucida Console",
+      "Lucida Sans Typewriter",
+      "Menlo",
+      "Monaco",
+      "Monoid",
+      "Operator Mono",
+      "Pragmata",
+      "SF Mono",
+      "Source Code Pro",
+      "Vera Sans Mono",
+      "Victor Mono",
+      "Ubuntu Mono"
+    ],
     "busy_detection"                               : "always",
     "busy_exclusion_list"                          : ["tmux", "screen"],
     "check_arguments_to_r_function_calls"          : false,
@@ -40,15 +87,11 @@
     "console_suspend_blocked_notice_delay"         : 5,
     "continue_comments_on_newline"                 : false,
     "cpp_template"                                 : "Rcpp",
-    "cran_mirror"                                  : {},
-    "custom_shell_command"                         : "",
-    "custom_shell_options"                         : "",
     "data_viewer_max_cell_size"                    : 50,
     "data_viewer_max_columns"                      : 50,
     "default_encoding"                             : "",
     "default_latex_program"                        : "pdfLaTeX",
     "default_project_location"                     : "",
-    "default_r_version"                            : {},
     "default_sweave_engine"                        : "Sweave",
     "diagnostics_in_r_function_calls"              : true,
     "diagnostics_on_save"                          : true,
@@ -74,7 +117,6 @@
     "font_size_points"                             : 10,
     "full_project_path_in_window_title"            : false,
     "git_diff_ignore_whitespace"                   : false,
-    "git_exe_path"                                 : "",
     "global_theme"                                 : "default",
     "graphics_antialiasing"                        : "default",
     "graphics_backend"                             : "default",
@@ -121,10 +163,7 @@
     "project_safe_startup_seconds"                 : 30,
     "publish_ca_bundle"                            : "",
     "publish_check_certificates"                   : true,
-    "python_path"                                  : "",
     "python_project_environment_automatic_activate": true,
-    "python_type"                                  : "",
-    "python_version"                               : "",
     "rainbow_fenced_divs"                          : true,
     "rainbow_parentheses"                          : false,
     "real_time_spellchecking"                      : true,
@@ -142,7 +181,6 @@
     "rmd_preferred_template_path"                  : "",
     "rmd_viewer_type"                              : "window",
     "root_document"                                : "",
-    "rsa_key_path"                                 : "",
     "run_rprofile_on_resume"                       : false,
     "save_before_sourcing"                         : true,
     "save_files_before_build"                      : false,
@@ -181,7 +219,6 @@
     "soft_wrap_rmd_files"                          : true,
     "sort_file_names_naturally"                    : true,
     "source_with_echo"                             : false,
-    "spelling_custom_dictionaries"                 : [],
     "spelling_dictionary_language"                 : "en_US",
     "ssh_key_type"                                 : "ed25519",
     "strip_trailing_whitespace"                    : false,
@@ -196,6 +233,8 @@
     "tab_multiline_completion"                     : false,
     "terminal_bell_style"                          : "sound",
     "terminal_close_behavior"                      : "always",
+    "terminal_hooks"                               : true,
+    "terminal_ignored_environment_variables"       : [],
     "terminal_initial_directory"                   : "project",
     "terminal_local_echo"                          : true,
     "terminal_path"                                : "",
@@ -236,7 +275,6 @@
     "warn_if_no_such_variable_in_scope"            : false,
     "warn_variable_defined_but_not_used"           : false,
     "windows_terminal_shell"                       : "default",
-    "wrap_tab_navigation"                          : true,
-    "zotero_libraries"                             : ["My Library"]
+    "wrap_tab_navigation"                          : true
 }