diff --git a/.github/workflows/wiki-docs.yaml b/.github/workflows/wiki-docs.yaml
new file mode 100644
index 0000000..2d0d7c4
--- /dev/null
+++ b/.github/workflows/wiki-docs.yaml
@@ -0,0 +1,30 @@
+name: Deploy Sphinx Docs to Wiki
+
+on:
+  release:
+    types:
+      - published
+
+jobs:
+  deploy:
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v3
+      - name: Set up Python
+        uses: actions/setup-python@v4
+        with:
+          python-version: '3.x'
+      - name: Install dependencies
+        run: |
+          pip install poetry
+          poetry install --with docs
+      - name: Build docs
+        run: sphinx-build -M markdown ./docs ./docs/_build
+      - name: Push to Wiki
+        run: |
+          git clone https://github.com/molecularmodelinglab/ChemGED.wiki.git
+          cp -r ./docs/_build/markdown/* ChemGED.wiki
+          cd ChemGED.wiki
+          git add .
+          git commit -m "Update documentation [auto-build]"
+          git push
diff --git a/.gitignore b/.gitignore
index f3e87b5..63288bf 100644
--- a/.gitignore
+++ b/.gitignore
@@ -2,3 +2,4 @@
 .venv
 tests/test-results/
 docs/_build/
+dist/
diff --git a/README.md b/README.md
index 35339bc..eb0af01 100644
--- a/README.md
+++ b/README.md
@@ -54,7 +54,7 @@ print(distances_matrix)  # Square form
 ```
 
 ## Documentation
-For more detailed documentation, please visit [ReadTheDocs](https://chemged.readthedocs.io/).
+You can read more detailed documentation in the docs folder.
 
 ## Implementation
 The approach used here uses bipartite graph matching[[1]](#1), and most of its implementation in python
diff --git a/docs/conf.py b/docs/conf.py
index 0c23a00..21b4732 100644
--- a/docs/conf.py
+++ b/docs/conf.py
@@ -33,6 +33,7 @@
     "sphinx.ext.napoleon",
     "sphinx.ext.intersphinx",
     "sphinx.ext.mathjax",
+    "sphinx_markdown_builder",
 ]
 
 templates_path = ["_templates"]
diff --git a/docs/requirements.txt b/docs/requirements.txt
index 3c934c0..2ab002b 100644
--- a/docs/requirements.txt
+++ b/docs/requirements.txt
@@ -1,5 +1,6 @@
 sphinx>=7.1.2
 sphinx_rtd_theme>=1.3.0
+sphinx-markdown-builder>=0.6.8
 networkx>=3.5
 numpy>=2.0.0
 scipy>=1.15.3
diff --git a/poetry.lock b/poetry.lock
index 61a69f6..02e484d 100644
--- a/poetry.lock
+++ b/poetry.lock
@@ -2585,6 +2585,26 @@ docs = ["sphinxcontrib-websupport"]
 lint = ["flake8 (>=3.5.0)", "importlib_metadata", "mypy (==1.9.0)", "pytest (>=6.0)", "ruff (==0.3.7)", "sphinx-lint", "tomli", "types-docutils", "types-requests"]
 test = ["cython (>=3.0)", "defusedxml (>=0.7.1)", "pytest (>=6.0)", "setuptools (>=67.0)"]
 
+[[package]]
+name = "sphinx-markdown-builder"
+version = "0.6.8"
+description = "A Sphinx extension to add markdown generation support."
+optional = false
+python-versions = ">=3.7"
+groups = ["docs"]
+files = [
+    {file = "sphinx_markdown_builder-0.6.8-py3-none-any.whl", hash = "sha256:f04ab42d52449363228b9104569c56b778534f9c41a168af8cfc721a1e0e3edc"},
+    {file = "sphinx_markdown_builder-0.6.8.tar.gz", hash = "sha256:6141b566bf18dd1cd515a0a90efd91c6c4d10fc638554fab2fd19cba66543dd7"},
+]
+
+[package.dependencies]
+docutils = "*"
+sphinx = ">=5.1.0"
+tabulate = "*"
+
+[package.extras]
+dev = ["black", "bumpver", "coveralls", "flake8", "isort", "pip-tools", "pylint", "pytest", "pytest-cov", "sphinx (>=5.3.0)", "sphinxcontrib-plantuml", "sphinxcontrib.httpdomain"]
+
 [[package]]
 name = "sphinx-rtd-theme"
 version = "1.3.0"
@@ -2720,6 +2740,21 @@ lint = ["mypy", "ruff (==0.5.5)", "types-docutils"]
 standalone = ["Sphinx (>=5)"]
 test = ["pytest"]
 
+[[package]]
+name = "tabulate"
+version = "0.9.0"
+description = "Pretty-print tabular data"
+optional = false
+python-versions = ">=3.7"
+groups = ["docs"]
+files = [
+    {file = "tabulate-0.9.0-py3-none-any.whl", hash = "sha256:024ca478df22e9340661486f85298cff5f6dcdba14f3813e8830015b9ed1948f"},
+    {file = "tabulate-0.9.0.tar.gz", hash = "sha256:0095b12bf5966de529c0feb1fa08671671b3368eec77d7ef7ab114be2c068b3c"},
+]
+
+[package.extras]
+widechars = ["wcwidth"]
+
 [[package]]
 name = "tomlkit"
 version = "0.13.3"
@@ -3056,4 +3091,4 @@ cffi = ["cffi (>=1.11)"]
 [metadata]
 lock-version = "2.1"
 python-versions = ">=3.11,<4.0"
-content-hash = "4a27def5957fabf64e9dc6885e04324be378588256e5247aae0874f1de895f98"
+content-hash = "781b8dc780dfb2dff7f00474d2aa1391460724d0b3176c547c8dbf59cab6a33c"
diff --git a/pyproject.toml b/pyproject.toml
index 00e1b1e..ba6d06e 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -53,6 +53,7 @@ optional = true
 [tool.poetry.group.docs.dependencies]
 sphinx = "^7.1.2"
 sphinx_rtd_theme = "^1.3.0"
+sphinx-markdown-builder = "^0.6.8"
 
 [[tool.poetry.source]]
 name = "PyPI"