diff --git a/.github/workflows/notebooks.yml b/.github/workflows/notebooks.yml
deleted file mode 100644
index dc62fc44e..000000000
--- a/.github/workflows/notebooks.yml
+++ /dev/null
@@ -1,33 +0,0 @@
-name: Notebooks
-
-on:
-    push:
-      branches: [ develop ]
-    pull_request:
-      branches: [ main, develop ]
-
-jobs:
-    run-notebook:
-      runs-on: ubuntu-latest
-
-      steps:
-        - uses: actions/checkout@v4
-        - name: Initialize Python
-          uses: actions/setup-python@v4.3.1
-          with:
-            python-version: '3.11'
-        - name: Setup Python
-          run: |
-            python -m pip install --upgrade pip jupyter
-            python -m pip install .
-            python -m ipykernel install --user --name run-notebook --display-name "Run notebook"
-        - name: Run notebooks
-          run: |
-            # The functional annotation of RPGRIP1, STXBP1, and KBG takes too long.
-            # However, we can add them later, if we will really want that.
-            cohorts=(MAPK8IP3 PPP2R1A SUOX)
-            for cohort in ${cohorts[@]}; do
-              nb="notebooks/${cohort}/${cohort}.ipynb"
-              printf "Processing notebook at %s\n" ${nb}
-              jupyter execute --kernel_name run-notebook ${nb}
-            done