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When trying to run the creat_inputs script for a longitudinal sample, is there anyway to specify multiple tumor IDs so that the correct VCF columns are used? Mutect outputs the tumor/normal columns alphabetically(or numerically) ordered, so being able to designate the correct columns for multiple samples would be ideal.
Is this functionality already included?
best,
David
The text was updated successfully, but these errors were encountered:
Hello,
When trying to run the creat_inputs script for a longitudinal sample, is there anyway to specify multiple tumor IDs so that the correct VCF columns are used? Mutect outputs the tumor/normal columns alphabetically(or numerically) ordered, so being able to designate the correct columns for multiple samples would be ideal.
Is this functionality already included?
best,
David
The text was updated successfully, but these errors were encountered: