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Not locating libhts.so #20
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did you run ldconfig after installing htslib? and make sure that directory is inclduded on your ld.so.conf? |
Just tried running sudo ldconfig and added that folder to ld.so.conf. Didn't work. To clarify, I used A further quesition I have is about In any case, the issue is solved, as the binary works. Just the direct nimble installation that seems borked. Perhaps you want to close this. Thanks! |
Thanks @brentp for jumping in and @lf-araujo for the report. @lf-araujo glad you got it working with the static build. Can I just check -- you said "I used nimble install nimpress, not the instructions in the github readme." Can you confirm if the readme build instructions worked for you or not? We can look into fixing the nimble install but I hope the readme instructions at least work. On your question about |
Hi @mpinese and @brentp,
upon first attempt using a linux distribution the executable seems not to be finding the libhts.so that is installed at
/usr/local/lib
in my system. My steps were:installing htslib:
The file is at the
/lib
folder:But simply calling nimpress ends with error:
[luis@solus] ➜ Downloads nimpress ebi-a-GCST006686.vcf.gz could not load: libhts.so (compile with -d:nimDebugDlOpen for more information)
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