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Copy pathOpenFOAM-3.0.x-ec1903cb.patch
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OpenFOAM-3.0.x-ec1903cb.patch
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.gitignore | 1 +
Allwmake | 17 ++-
applications/Allwmake | 14 +-
.../scalarTransportFoam/scalarTransportFoam.C | 6 +-
.../DelaunayMesh/DelaunayMesh.C | 1 +
.../foamyMesh/conformalVoronoiMesh/Make/options | 3 +-
.../cellSizeAndAlignmentControl.H | 1 +
.../CGALTriangulation3DKernel.H | 2 +
.../foamyQuadMesh/CGALTriangulation2DKernel.H | 2 +
.../foamyMesh/foamyQuadMesh/Make/options | 3 +-
.../mesh/generation/snappyHexMesh/Make/options | 1 -
.../mesh/manipulation/renumberMesh/Make/options | 1 -
.../dataConversion/foamToEnsight/Make/options | 1 -
.../postProcessing/graphics/PV3Readers/Allwmake | 3 +
.../postProcessing/graphics/PV4Readers/Allwmake | 3 +
bin/foamInstallationTest | 21 ++-
bin/foamJob | 6 +
bin/foamMonitor | 11 +-
bin/paraFoam | 5 +
bin/tools/RunFunctions | 123 ++++++++++++----
etc/bashrc | 70 +++++++--
etc/config/CGAL.sh | 55 ++++++-
etc/config/metis.sh | 39 ++++-
etc/config/paraview-osx.sh | 17 +++
etc/config/scotch.sh | 47 +++++-
etc/config/settings.sh | 112 ++++++++++++--
src/Allwmake | 18 ++-
src/OSspecific/POSIX/POSIX.C | 36 +++++
src/OSspecific/POSIX/clockTime/clockTime.H | 3 +
src/OSspecific/POSIX/printStack.C | 72 +++++++--
src/OSspecific/POSIX/signals/sigFpe.C | 92 +++++++++++-
src/OSspecific/POSIX/signals/sigFpe.H | 14 +-
src/OpenFOAM/Make/files | 6 +
src/OpenFOAM/db/IOstreams/IOstreams.H | 4 +
.../db/dynamicLibrary/dynamicCode/dynamicCode.C | 4 +
.../db/dynamicLibrary/dynamicCode/dynamicCode.H | 4 +
src/OpenFOAM/primitives/Scalar/doubleFloat.H | 15 ++
src/OpenFOAM/primitives/ints/int/int.H | 8 +
src/OpenFOAM/primitives/ints/long/long.C | 50 +++++++
src/OpenFOAM/primitives/ints/long/long.H | 138 ++++++++++++++++++
src/OpenFOAM/primitives/ints/long/longIO.C | 104 +++++++++++++
src/OpenFOAM/primitives/ints/ulong/ulong.C | 52 +++++++
src/OpenFOAM/primitives/ints/ulong/ulong.H | 138 ++++++++++++++++++
src/OpenFOAM/primitives/ints/ulong/ulongIO.C | 101 +++++++++++++
.../primitives/ranges/labelRange/labelRangeI.H | 4 +-
.../primitives/ranges/labelRange/labelRangesI.H | 2 +-
src/conversion/ensight/part/ensightPartCells.C | 4 +-
src/fvAgglomerationMethods/Allwmake | 9 +-
.../MGridGenGamgAgglomeration/Make/options | 16 +-
.../edgeFaceCirculator/edgeFaceCirculator.C | 2 +-
src/parallel/decompose/metisDecomp/Allwmake | 6 +-
src/parallel/decompose/metisDecomp/Make/options | 1 -
src/parallel/decompose/metisDecomp/metisDecomp.C | 6 +-
src/parallel/decompose/ptscotchDecomp/Make/options | 10 +-
src/parallel/decompose/scotchDecomp/Make/options | 8 +-
src/renumber/SloanRenumber/Make/options | 31 ++--
wmake/makeWmake | 73 ----------
wmake/{MakefileApps => makefiles/apps} | 7 +-
wmake/{MakefileFiles => makefiles/files} | 36 ++---
wmake/{Makefile => makefiles/general} | 89 +++++------
wmake/rules/General/CGAL | 2 +
wmake/rules/General/X | 2 +
wmake/rules/General/bison | 16 +-
wmake/rules/General/btyacc | 11 +-
wmake/rules/General/btyacc++ | 4 +-
wmake/rules/General/byacc | 11 +-
wmake/rules/General/flex | 8 +-
wmake/rules/General/flex++ | 8 +-
wmake/rules/General/general | 41 +++++-
wmake/rules/General/moc | 8 +-
wmake/rules/General/mplib | 2 +
wmake/rules/General/mplibMPICH | 2 +
wmake/rules/General/mplibMPICH-GM | 2 +
wmake/rules/General/mplibOPENMPI | 1 +
wmake/rules/General/mplibQSMPI | 2 +
wmake/rules/General/mplibSGIMPI | 2 +
wmake/rules/General/mplibSYSTEMMPI | 2 +
wmake/rules/General/mplibSYSTEMOPENMPI | 2 +
wmake/rules/General/standard | 2 +-
wmake/rules/General/transform | 6 +-
wmake/rules/General/version | 12 +-
wmake/rules/General/yacc | 20 ++-
wmake/rules/darwin64Clang/c | 23 +++
wmake/rules/darwin64Clang/c++ | 35 +++++
wmake/rules/darwin64Clang/c++Debug | 4 +
wmake/rules/darwin64Clang/c++Opt | 5 +
wmake/rules/darwin64Clang/c++Prof | 4 +
wmake/rules/darwin64Clang/cDebug | 4 +
wmake/rules/darwin64Clang/cOpt | 4 +
wmake/rules/darwin64Clang/cProf | 4 +
wmake/rules/darwin64Clang/general | 12 ++
wmake/rules/linux64Clang/c | 4 +-
wmake/rules/linux64Clang/c++ | 6 +-
wmake/rules/linux64Clang/c++Debug | 2 +
wmake/rules/linux64Clang/c++Opt | 3 +-
wmake/rules/linux64Clang/c++Prof | 2 +
wmake/rules/linux64Clang/cDebug | 2 +
wmake/rules/linux64Clang/cOpt | 2 +
wmake/rules/linux64Clang/cProf | 2 +
wmake/rules/linux64Clang/general | 6 +-
wmake/rules/linux64Clang/mplibHPMPI | 2 +
wmake/rules/linux64Clang/mplibINTELMPI | 2 +
wmake/rules/linux64Gcc/c | 4 +-
wmake/rules/linux64Gcc/c++ | 6 +-
wmake/rules/linux64Gcc/c++Debug | 2 +
wmake/rules/linux64Gcc/c++Opt | 2 +
wmake/rules/linux64Gcc/c++Prof | 2 +
wmake/rules/linux64Gcc/cDebug | 2 +
wmake/rules/linux64Gcc/cOpt | 2 +
wmake/rules/linux64Gcc/cProf | 2 +
wmake/rules/linux64Gcc/general | 6 +-
wmake/rules/linux64Gcc/mplibHPMPI | 2 +
wmake/rules/linux64Gcc/mplibINTELMPI | 2 +
wmake/rules/linux64Gcc45 | 1 -
wmake/rules/linux64Gcc46 | 1 -
wmake/rules/linux64Gcc47 | 1 -
wmake/rules/linux64Gcc48 | 1 -
wmake/rules/linux64Gcc49 | 1 -
wmake/rules/linux64Gcc51 | 1 -
wmake/rules/linux64GccKNL/c | 16 ++
wmake/rules/linux64GccKNL/c++ | 24 +++
wmake/rules/linux64GccKNL/c++Debug | 2 +
wmake/rules/linux64GccKNL/c++Opt | 4 +
wmake/rules/linux64GccKNL/c++Prof | 2 +
wmake/rules/linux64GccKNL/cDebug | 2 +
wmake/rules/linux64GccKNL/cOpt | 2 +
wmake/rules/linux64GccKNL/cProf | 2 +
wmake/rules/linux64GccKNL/general | 8 +
wmake/rules/linux64GccKNL/mplibHPMPI | 3 +
wmake/rules/linux64GccKNL/mplibINTELMPI | 3 +
wmake/rules/linux64Icc/c | 2 +-
wmake/rules/linux64Icc/c++ | 4 +-
wmake/rules/linux64Icc/general | 4 +-
wmake/rules/linux64IccKNL/c | 16 ++
wmake/rules/linux64IccKNL/c++ | 25 ++++
wmake/rules/linux64IccKNL/c++Debug | 2 +
wmake/rules/linux64IccKNL/c++Opt | 2 +
wmake/rules/linux64IccKNL/c++Prof | 2 +
wmake/rules/linux64IccKNL/cDebug | 2 +
wmake/rules/linux64IccKNL/cOpt | 2 +
wmake/rules/linux64IccKNL/cProf | 2 +
wmake/rules/linux64IccKNL/general | 8 +
wmake/rules/linux64IccKNL/mplibHPMPI | 3 +
wmake/rules/linux64IccKNL/mplibINTELMPI | 3 +
wmake/rules/linuxARM7Gcc/c | 2 +-
wmake/rules/linuxARM7Gcc/c++ | 4 +-
wmake/rules/linuxARM7Gcc/general | 4 +-
wmake/rules/linuxClang/c | 2 +-
wmake/rules/linuxClang/c++ | 4 +-
wmake/rules/linuxClang/general | 4 +-
wmake/rules/linuxGcc/c | 2 +-
wmake/rules/linuxGcc/c++ | 4 +-
wmake/rules/linuxGcc/general | 4 +-
wmake/rules/linuxGcc45 | 1 -
wmake/rules/linuxGcc46 | 1 -
wmake/rules/linuxGcc47 | 1 -
wmake/rules/linuxGcc48 | 1 -
wmake/rules/linuxGcc49 | 1 -
wmake/rules/linuxGcc51 | 1 -
wmake/rules/linuxIA64Gcc/c | 2 +-
wmake/rules/linuxIA64Gcc/c++ | 4 +-
wmake/rules/linuxIA64Gcc/general | 6 +-
wmake/rules/linuxIA64Icc/c | 2 +-
wmake/rules/linuxIA64Icc/c++ | 4 +-
wmake/rules/linuxIA64Icc/general | 6 +-
wmake/rules/linuxIcc/c | 2 +-
wmake/rules/linuxIcc/c++ | 2 +-
wmake/rules/linuxIcc/general | 4 +-
wmake/rules/linuxPPC64Gcc/c | 2 +-
wmake/rules/linuxPPC64Gcc/c++ | 4 +-
wmake/rules/linuxPPC64Gcc/general | 6 +-
wmake/rules/linuxPPC64leGcc/c | 2 +-
wmake/rules/linuxPPC64leGcc/c++ | 4 +-
wmake/rules/linuxPPC64leGcc/general | 6 +-
wmake/rules/solaris64Gcc/c | 2 +-
wmake/rules/solaris64Gcc/c++ | 4 +-
wmake/rules/solaris64Gcc/general | 6 +-
wmake/rules/solarisGcc/c | 2 +-
wmake/rules/solarisGcc/c++ | 4 +-
wmake/rules/solarisGcc/general | 6 +-
wmake/scripts/AllwmakeParseArguments | 24 ++-
wmake/scripts/makeFiles | 4 +-
wmake/scripts/wmakeFunctions | 18 ++-
wmake/src/Makefile | 29 ++--
wmake/src/wmkdep.l | 18 ++-
wmake/wclean | 125 ++++++++++++++--
wmake/wcleanAll | 91 ------------
wmake/wcleanLnIncludeAll | 7 +-
wmake/wcleanMachine | 98 -------------
wmake/wcleanPlatform | 127 ++++++++++++++++
wmake/wdep | 3 +
wmake/wmake | 72 ++++++---
wmake/wmakeCheckPwd | 5 +-
wmake/wmakeFilesAndOptions | 9 +-
wmake/wmakeLnInclude | 31 ++--
wmake/wmakeLnIncludeAll | 19 ++-
wmake/wmakePrintBuild | 5 +-
wmake/wmakeScheduler | 26 ++--
wmake/wmakeSchedulerUptime | 39 +++--
wmake/wrmdep | 162 ++++++++++++++++++---
wmake/wrmdepold | 133 -----------------
wmake/wrmo | 3 +
202 files changed, 2519 insertions(+), 850 deletions(-)
diff --git a/.gitignore b/.gitignore
index 28fb9017..fe1ede44 100644
--- a/.gitignore
+++ b/.gitignore
@@ -39,6 +39,7 @@ linux*Gcc*/
linux*Icc*/
solaris*Gcc*/
SunOS*Gcc*/
+darwin*Clang*/
platforms/
# Reinstate wmake/rules that might look like build directories
diff --git a/Allwmake b/Allwmake
index e0dded16..af7bc9ef 100755
--- a/Allwmake
+++ b/Allwmake
@@ -1,6 +1,17 @@
#!/bin/sh
cd ${0%/*} || exit 1 # Run from this directory
+# Check if environment is configured
+[ -z "$WM_PROJECT_DIR" ] && {
+# No, it is not, so we source bashrc ourselves
+[ -f "$(pwd)/etc/bashrc" ] && {
+echo
+echo "You have forgotten to source etc/bashrc, so I do it myself."
+echo
+source $(pwd)/etc/bashrc
+}
+}
+
# Parse arguments for library compilation without documentation by default
genDoc=0
targetType=libso
@@ -13,11 +24,12 @@ wmakeCheckPwd "$WM_PROJECT_DIR" || {
exit 1
}
-[ -n "$FOAM_EXT_LIBBIN" ] || {
+[ "$(uname -s)" = "Darwin" ] || { [ -n "$FOAM_EXT_LIBBIN" ] || {
echo "Allwmake error: FOAM_EXT_LIBBIN not set"
echo " Check the OpenFOAM entries in your dot-files and source them."
exit 1
}
+}
# Compile wmake support applications
(cd wmake/src && make)
@@ -27,7 +39,8 @@ if [ -d "$WM_THIRD_PARTY_DIR" ]
then
$WM_THIRD_PARTY_DIR/Allwmake
else
- echo "Allwmake: no ThirdParty directory found - skipping"
+ [ "$(uname -s)" = "Darwin" ] \
+ || echo "Allwmake: no ThirdParty directory found - skipping"
fi
# Compile OpenFOAM libraries and applications
diff --git a/applications/Allwmake b/applications/Allwmake
index f23a233b..9c61fdc9 100755
--- a/applications/Allwmake
+++ b/applications/Allwmake
@@ -1,6 +1,17 @@
#!/bin/sh
cd ${0%/*} || exit 1 # Run from this directory
+# Check if environment is configured
+[ -z "$WM_PROJECT_DIR" ] && {
+# No, it is not, so we source bashrc ourselves
+[ -f "$(pwd)/../etc/bashrc" ] && {
+echo
+echo "You have forgotten to source etc/bashrc, so I do it myself."
+echo
+source $(pwd)/../etc/bashrc
+}
+}
+
# Parse arguments for library compilation
targetType=libso
. $WM_PROJECT_DIR/wmake/scripts/AllwmakeParseArguments
@@ -12,11 +23,12 @@ wmakeCheckPwd "$WM_PROJECT_DIR/applications" || {
exit 1
}
-[ -n "$FOAM_EXT_LIBBIN" ] || {
+[ "$(uname -s)" = "Darwin" ] || { [ -n "$FOAM_EXT_LIBBIN" ] || {
echo "Allwmake error: FOAM_EXT_LIBBIN not set"
echo " Check the OpenFOAM entries in your dot-files and source them."
exit 1
}
+}
set -x
diff --git a/applications/solvers/basic/scalarTransportFoam/scalarTransportFoam.C b/applications/solvers/basic/scalarTransportFoam/scalarTransportFoam.C
index 2430732e..5c4937b5 100644
--- a/applications/solvers/basic/scalarTransportFoam/scalarTransportFoam.C
+++ b/applications/solvers/basic/scalarTransportFoam/scalarTransportFoam.C
@@ -58,7 +58,7 @@ int main(int argc, char *argv[])
while (simple.correctNonOrthogonal())
{
- solve
+ fvScalarMatrix TEqn
(
fvm::ddt(T)
+ fvm::div(phi, T)
@@ -66,6 +66,10 @@ int main(int argc, char *argv[])
==
fvOptions(T)
);
+
+ fvOptions.constrain(TEqn);
+
+ TEqn.solve();
}
runTime.write();
diff --git a/applications/utilities/mesh/generation/foamyMesh/conformalVoronoiMesh/DelaunayMesh/DelaunayMesh.C b/applications/utilities/mesh/generation/foamyMesh/conformalVoronoiMesh/DelaunayMesh/DelaunayMesh.C
index eb88c435..3950ce25 100644
--- a/applications/utilities/mesh/generation/foamyMesh/conformalVoronoiMesh/DelaunayMesh/DelaunayMesh.C
+++ b/applications/utilities/mesh/generation/foamyMesh/conformalVoronoiMesh/DelaunayMesh/DelaunayMesh.C
@@ -30,6 +30,7 @@ License
#include "scalarIOField.H"
#include "labelIOField.H"
#include "pointConversion.H"
+#include "Time.H"
// * * * * * * * * * * * * * * * * Constructors * * * * * * * * * * * * * * //
diff --git a/applications/utilities/mesh/generation/foamyMesh/conformalVoronoiMesh/Make/options b/applications/utilities/mesh/generation/foamyMesh/conformalVoronoiMesh/Make/options
index 44c1d877..082c0eb9 100644
--- a/applications/utilities/mesh/generation/foamyMesh/conformalVoronoiMesh/Make/options
+++ b/applications/utilities/mesh/generation/foamyMesh/conformalVoronoiMesh/Make/options
@@ -23,8 +23,7 @@ EXE_INC = \
-I$(LIB_SRC)/triSurface/lnInclude \
-I$(LIB_SRC)/sampling/lnInclude \
-I$(LIB_SRC)/mesh/autoMesh/lnInclude \
- -IPrintTable \
- -I/usr/include
+ -IPrintTable
LIB_LIBS = \
${CGAL_LIBS} \
diff --git a/applications/utilities/mesh/generation/foamyMesh/conformalVoronoiMesh/cellShapeControl/cellSizeAndAlignmentControl/cellSizeAndAlignmentControl/cellSizeAndAlignmentControl.H b/applications/utilities/mesh/generation/foamyMesh/conformalVoronoiMesh/cellShapeControl/cellSizeAndAlignmentControl/cellSizeAndAlignmentControl/cellSizeAndAlignmentControl.H
index adda0867..87194fd3 100644
--- a/applications/utilities/mesh/generation/foamyMesh/conformalVoronoiMesh/cellShapeControl/cellSizeAndAlignmentControl/cellSizeAndAlignmentControl/cellSizeAndAlignmentControl.H
+++ b/applications/utilities/mesh/generation/foamyMesh/conformalVoronoiMesh/cellShapeControl/cellSizeAndAlignmentControl/cellSizeAndAlignmentControl/cellSizeAndAlignmentControl.H
@@ -35,6 +35,7 @@ SourceFiles
#ifndef cellSizeAndAlignmentControl_H
#define cellSizeAndAlignmentControl_H
+#include "Switch.H"
#include "dictionary.H"
#include "conformationSurfaces.H"
#include "Time.H"
diff --git a/applications/utilities/mesh/generation/foamyMesh/conformalVoronoiMesh/conformalVoronoiMesh/CGALTriangulation3DKernel.H b/applications/utilities/mesh/generation/foamyMesh/conformalVoronoiMesh/conformalVoronoiMesh/CGALTriangulation3DKernel.H
index cdafc7ab..2f52a342 100644
--- a/applications/utilities/mesh/generation/foamyMesh/conformalVoronoiMesh/conformalVoronoiMesh/CGALTriangulation3DKernel.H
+++ b/applications/utilities/mesh/generation/foamyMesh/conformalVoronoiMesh/conformalVoronoiMesh/CGALTriangulation3DKernel.H
@@ -31,6 +31,8 @@ Description
#ifndef CGALTriangulation3DKernel_H
#define CGALTriangulation3DKernel_H
+#pragma clang diagnostic ignored "-Wshift-negative-value"
+
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
#include "CGAL/Delaunay_triangulation_3.h"
diff --git a/applications/utilities/mesh/generation/foamyMesh/foamyQuadMesh/CGALTriangulation2DKernel.H b/applications/utilities/mesh/generation/foamyMesh/foamyQuadMesh/CGALTriangulation2DKernel.H
index 012192b1..31129a27 100644
--- a/applications/utilities/mesh/generation/foamyMesh/foamyQuadMesh/CGALTriangulation2DKernel.H
+++ b/applications/utilities/mesh/generation/foamyMesh/foamyQuadMesh/CGALTriangulation2DKernel.H
@@ -31,6 +31,8 @@ Description
#ifndef CGALTriangulation2DKernel_H
#define CGALTriangulation2DKernel_H
+#pragma clang diagnostic ignored "-Wshift-negative-value"
+
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
#include "CGAL/Delaunay_triangulation_2.h"
diff --git a/applications/utilities/mesh/generation/foamyMesh/foamyQuadMesh/Make/options b/applications/utilities/mesh/generation/foamyMesh/foamyQuadMesh/Make/options
index 0c04fa99..017ff544 100644
--- a/applications/utilities/mesh/generation/foamyMesh/foamyQuadMesh/Make/options
+++ b/applications/utilities/mesh/generation/foamyMesh/foamyQuadMesh/Make/options
@@ -21,8 +21,7 @@ EXE_INC = \
-I$(LIB_SRC)/sampling/lnInclude \
-I$(LIB_SRC)/triSurface/lnInclude \
-I$(LIB_SRC)/fileFormats/lnInclude \
- -I$(LIB_SRC)/mesh/autoMesh/lnInclude \
- -I/usr/include
+ -I$(LIB_SRC)/mesh/autoMesh/lnInclude
EXE_LIBS = \
$(CGAL_LIBS) \
diff --git a/applications/utilities/mesh/generation/snappyHexMesh/Make/options b/applications/utilities/mesh/generation/snappyHexMesh/Make/options
index 219e3d41..e8b06882 100644
--- a/applications/utilities/mesh/generation/snappyHexMesh/Make/options
+++ b/applications/utilities/mesh/generation/snappyHexMesh/Make/options
@@ -1,5 +1,4 @@
EXE_INC = \
- /* -g -DFULLDEBUG -O0 */ \
-I$(LIB_SRC)/parallel/decompose/decompositionMethods/lnInclude \
-I$(LIB_SRC)/mesh/autoMesh/lnInclude \
-I$(LIB_SRC)/meshTools/lnInclude \
diff --git a/applications/utilities/mesh/manipulation/renumberMesh/Make/options b/applications/utilities/mesh/manipulation/renumberMesh/Make/options
index 49a1c3d2..882d1e43 100644
--- a/applications/utilities/mesh/manipulation/renumberMesh/Make/options
+++ b/applications/utilities/mesh/manipulation/renumberMesh/Make/options
@@ -1,5 +1,4 @@
EXE_INC = \
- /* -DFULLDEBUG -g -O0 */ \
${COMPILE_FLAGS} \
-I$(LIB_SRC)/meshTools/lnInclude \
-I$(LIB_SRC)/dynamicMesh/lnInclude \
diff --git a/applications/utilities/postProcessing/dataConversion/foamToEnsight/Make/options b/applications/utilities/postProcessing/dataConversion/foamToEnsight/Make/options
index 77992428..b4382c4d 100644
--- a/applications/utilities/postProcessing/dataConversion/foamToEnsight/Make/options
+++ b/applications/utilities/postProcessing/dataConversion/foamToEnsight/Make/options
@@ -1,5 +1,4 @@
EXE_INC = \
- /* -DFULLDEBUG -g -O0 */ \
-I$(LIB_SRC)/finiteVolume/lnInclude \
-I$(LIB_SRC)/meshTools/lnInclude \
-I$(LIB_SRC)/sampling/lnInclude \
diff --git a/applications/utilities/postProcessing/graphics/PV3Readers/Allwmake b/applications/utilities/postProcessing/graphics/PV3Readers/Allwmake
index ae0915f2..f974dbbd 100755
--- a/applications/utilities/postProcessing/graphics/PV3Readers/Allwmake
+++ b/applications/utilities/postProcessing/graphics/PV3Readers/Allwmake
@@ -2,6 +2,9 @@
cd ${0%/*} || exit 1 # Run from this directory
#set -x
+# Skip on OS X
+[ "$(uname -s)" = "Darwin" ] && exit 0
+
case "$ParaView_VERSION" in
3*)
if [ -d "$ParaView_DIR" -a -r "$ParaView_DIR" ]
diff --git a/applications/utilities/postProcessing/graphics/PV4Readers/Allwmake b/applications/utilities/postProcessing/graphics/PV4Readers/Allwmake
index 6f6e56b9..694f73f3 100755
--- a/applications/utilities/postProcessing/graphics/PV4Readers/Allwmake
+++ b/applications/utilities/postProcessing/graphics/PV4Readers/Allwmake
@@ -2,6 +2,9 @@
cd ${0%/*} || exit 1 # Run from this directory
#set -x
+# Skip on OS X
+[ "$(uname -s)" = "Darwin" ] && exit 0
+
case "$ParaView_VERSION" in
4*)
if [ -d "$ParaView_DIR" -a -r "$ParaView_DIR" ]
diff --git a/bin/foamInstallationTest b/bin/foamInstallationTest
index 17b285a5..f11e61e4 100755
--- a/bin/foamInstallationTest
+++ b/bin/foamInstallationTest
@@ -306,13 +306,23 @@ reportExecutable()
VERSION=`$APP_PATH --version | head -1`
;;
tar)
- VERSION=`$APP_PATH --version | head -1 | cut -d" " -f4`
- ;;
+ case "$OSTYPE" in
+ Darwin)
+ VERSION=`$APP_PATH --version | head -1 | cut -d" " -f2`
+ ;;
+ *)
+ VERSION=`$APP_PATH --version | head -1 | cut -d" " -f4`
+ ;;
+ esac
+ ;;
gzip)
case "$OSTYPE" in
SunOS)
VERSION=`$1 --version 2>&1 | grep gzip | cut -d" " -f2`
;;
+ Darwin)
+ VERSION=`$1 --version 2>&1`
+ ;;
*)
VERSION=`$1 --version | head -1 | cut -d" " -f2`
;;
@@ -341,6 +351,7 @@ reportExecutable()
checkOpenFOAMEnvironment()
{
[ -d "$WM_PROJECT_INST_DIR" ] && [ -d "$WM_THIRD_PARTY_DIR" ] || {
+ [ "$(uname -s)" = "Darwin" ] && return 0
echo ""
echo "FATAL ERROR: OpenFOAM environment not configured."
echo ""
@@ -388,7 +399,7 @@ checkHostName()
checkOS()
{
case "$OSTYPE" in
- Linux | LinuxAMD64 | SunOS )
+ Linux | LinuxAMD64 | SunOS | Darwin )
echo "`fixlen OS: $WIDTH` $OSTYPE version $(uname -r)"
;;
*)
@@ -429,7 +440,7 @@ echo "$COL1 $COL2 $COL3 $COL5"
hline
reportEnv '$WM_PROJECT_INST_DIR' 'noPath' "yes"
reportEnv '$WM_PROJECT_USER_DIR' 'noPath' "no"
-reportEnv '$WM_THIRD_PARTY_DIR' 'noPath' "yes"
+[ "$(uname -s)" = "Darwin" ] || reportEnv '$WM_THIRD_PARTY_DIR' 'noPath' "yes"
hline
#------------------------------------------------------------------------------
@@ -468,7 +479,7 @@ reportExecutable flex
reportExecutable "$WM_CC"
reportExecutable "$WM_CXX"
reportExecutable gzip
-if [ "$OSTYPE" = Linux ]
+if [ "$OSTYPE" = Linux -o "$OSTYPE" = "Darwin" ]
then
reportExecutable tar
else
diff --git a/bin/foamJob b/bin/foamJob
index 6646e5dd..512ab761 100755
--- a/bin/foamJob
+++ b/bin/foamJob
@@ -277,6 +277,12 @@ then
fi
else
+ # Check if we are on El Capitan or higher
+ if test "$(uname -s)" = "Darwin" && \
+ { test "$(uname -r | cut -d. -f1)" -gt 15; }
+ then
+ APPLICATION="foamExec $APPLICATION"
+ fi
#
# Run (on single processor)
#
diff --git a/bin/foamMonitor b/bin/foamMonitor
index e38545f0..cbd9602b 100755
--- a/bin/foamMonitor
+++ b/bin/foamMonitor
@@ -57,7 +57,12 @@ USAGE
plotFileHeader() {
cat<<EOF
-set term x11 1 font "helvetica,17" linewidth 1.5 persist noraise
+if (strstrt(GPVAL_TERMINALS, 'wxt')) {
+ selected_terminal = 'wxt'
+} else {
+ selected_terminal = 'x11'
+}
+set term selected_terminal 1 font "helvetica,17" linewidth 1.5 persist noraise
$LOGSCALE
$YRANGE
set title "Data Monitoring"
@@ -82,6 +87,8 @@ LOGSCALE=""
YRANGE=""
GNUPLOT=$(which gnuplot)
! [ "x$GNUPLOT" = "x" ] || usage "Gnuplot not installed"
+STAT="stat --format=%Y"
+[ "$(uname -s)" = "Darwin" ] && STAT="stat -f %m"
# parse options
while [ "$#" -gt 0 ]
@@ -169,7 +176,7 @@ PID=$!
while true
do
- MODTIME=$(stat --format=%Y $FILE)
+ MODTIME=$($STAT $FILE)
IDLEAGO=$(expr $(date +%s) - $IDLE)
test "$MODTIME" -gt "$IDLEAGO" || break
sleep $REFRESH
diff --git a/bin/paraFoam b/bin/paraFoam
index b032fc6c..fb513327 100755
--- a/bin/paraFoam
+++ b/bin/paraFoam
@@ -72,6 +72,11 @@ extension=OpenFOAM
requirePV=1
+[ "$(uname -s)" = "Darwin" ] && {
+extension=foam
+requirePV=0
+}
+
# Parse options
while [ "$#" -gt 0 ]
do
diff --git a/bin/tools/RunFunctions b/bin/tools/RunFunctions
index 5a254ea4..b36c5251 100644
--- a/bin/tools/RunFunctions
+++ b/bin/tools/RunFunctions
@@ -2,7 +2,7 @@
# ========= |
# \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
# \\ / O peration |
-# \\ / A nd | Copyright (C) 2011-2015 OpenFOAM Foundation
+# \\ / A nd | Copyright (C) 2011-2012 OpenFOAM Foundation
# \\/ M anipulation |
#------------------------------------------------------------------------------
# License
@@ -28,75 +28,142 @@
# Miscellaneous functions for running tutorial cases
#------------------------------------------------------------------------------
+isSIPEnabled()
+{
+ $(which -s csrutil) && {
+ [ $(csrutil status | awk '{print $5}' | tr -d ".") = "enabled" ] \
+ && return 0
+ }
+ return 1
+}
+
+# Workaround for cleared DYLD_LIBRARY_PATH
+[ "$(uname -s)" = "Darwin" ] && isSIPEnabled && . $WM_PROJECT_DIR/etc/bashrc
+
getNumberOfProcessors()
{
- sed -ne 's/^numberOfSubdomains\s*\(.*\);/\1/p' system/decomposeParDict
+ grep numberOfSubdomains system/decomposeParDict \
+ | awk '{print $2}' \
+ | tr -d ";"
}
getApplication()
{
- sed -ne 's/^ *application\s*\([a-zA-Z]*\)\s*;.*$/\1/p' system/controlDict
+ grep application system/controlDict \
+ | awk '{print $2}' \
+ | tr -d ";"
}
runApplication()
{
- APP_RUN=$1
- APP_NAME=${1##*/}
+ local force=
+ local append=
+
+ local app_run="$1"
+ while [ "$(echo $app_run | cut -c1)" = "-" ]; do
+ case $app_run in
+ -f|--force|-force|-overwrite)
+ force=y
+ ;;
+ -a|--append|-append)
+ append=y
+ ;;
+ esac
+ shift
+ app_run="$1"
+ done
shift
+ local app_name=${app_run##*/}
+
+ [ -x "$(which $app_run)" ] || {
+ echo "Application $app_run does not exist or is not executable."
+ exit 1
+ }
+
+ [ "$force" = "y" ] && rm -f "log.$app_name"
- if [ -f log.$APP_NAME ]
+ if [ -f "log.$app_name" ]
then
- echo "$APP_NAME already run on $PWD: remove log file to re-run"
+ if [ "$append" = "y" ]
+ then
+ echo "Running $app_run on $PWD (appending to log.$app_name)"
+ $app_run "$@" >> "log.$app_name" 2>&1
+ else
+ echo "$app_name already run on $PWD: remove log file to re-run"
+ fi
else
- echo "Running $APP_RUN on $PWD"
- $APP_RUN "$@" > log.$APP_NAME 2>&1
+ echo "Running $app_run on $PWD"
+ $app_run "$@" > "log.$app_name" 2>&1
fi
}
runParallel()
{
- APP_RUN=$1
- APP_NAME=${1##*/}
+ local force=
+ local append=
+
+ local app_run="$1"
+ while [ "$(echo $app_run | cut -c1)" = "-" ]; do
+ case $app_run in
+ -f|--force|-force|-o|-overwrite)
+ force=y
+ ;;
+ -a|--append|-append)
+ append=y
+ ;;
+ esac
+ shift
+ app_run="$1"
+ done
+ shift
+ local app_name=${app_run##*/}
+
+ [ -x "$(which $app_run)" ] || {
+ echo "Application $app_run does not exist or is not executable."
+ exit 1
+ }
+
+ [ "$force" = "y" ] && rm -f "log.$app_name"
+
+ local n_procs="$1"
shift
- if [ -f log.$APP_NAME ]
+ if [ -f "log.$app_name" ]
then
- echo "$APP_NAME already run on $PWD: remove log file to re-run"
+ if [ "$append" = "y" ]
+ then
+ echo
+ else
+ echo "$app_name already run on $PWD: remove log file to re-run"
+ fi
else
- nProcs=$1
- shift
- echo "Running $APP_RUN in parallel on $PWD using $nProcs processes"
-
- #if [ "$WM_SCHEDULER" ]
- #then
- # echo "$PWD: $WM_SCHEDULER -np $nProcs" 1>&2
- # $WM_SCHEDULER -np $nProcs "( mpirun -np $nProcs $APP_RUN -parallel "$@" < /dev/null > log.$APP_NAME 2>&1 )"
- #else
- ( mpirun -np $nProcs $APP_RUN -parallel "$@" < /dev/null > log.$APP_NAME 2>&1 )
- #fi
+ echo "Running $app_run in parallel on $PWD using $n_procs processes"
+
+ ( mpirun -np "$n_procs" $app_run -parallel "$@" < /dev/null > "log.$app_name" 2>&1 )
fi
}
compileApplication()
{
echo "Compiling $1 application"
- wmake $1
+ wmake "$1"
}
cloneCase()
{
- if [ -d $2 ]
+ if [ -d "$2" ]
then
echo "Case already cloned: remove case directory $2 to clone"
else
echo "Cloning $2 case from $1"
- mkdir $2
+ mkdir "$2"
cpfiles="0 system constant"
for f in $cpfiles
do
- cp -r $1/$f $2
+ cp -r "$1/$f" "$2"
done
fi
}
+# vim: set ft=sh:
#------------------------------------------------------------------------------
diff --git a/etc/bashrc b/etc/bashrc
index d04695de..40fa45d9 100644
--- a/etc/bashrc
+++ b/etc/bashrc
@@ -121,7 +121,8 @@ export WM_PROJECT_DIR=$WM_PROJECT_INST_DIR/$WM_PROJECT-$WM_PROJECT_VERSION
# Location of third-party software
# ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-export WM_THIRD_PARTY_DIR=$WM_PROJECT_INST_DIR/ThirdParty-$WM_PROJECT_VERSION
+[ "$(uname -s)" = "Darwin" ] || \
+ export WM_THIRD_PARTY_DIR=$WM_PROJECT_INST_DIR/ThirdParty-$WM_PROJECT_VERSION
# Location of site-specific templates etc
# ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
@@ -137,6 +138,17 @@ fi
# ~~~~~~~~~~~~~~~~~~~~~~
export WM_PROJECT_USER_DIR=$HOME/$WM_PROJECT/$USER-$WM_PROJECT_VERSION
+# Check if we are building OpenFOAM on OS X
+_foamOnOSX()
+{
+ # For portability we will not rely on $?
+ if [ "$(uname -s)" = "Darwin" ]
+ then
+ return 0
+ else
+ return 1
+ fi
+}
# Source files, possibly with some verbosity
_foamSource()
@@ -199,14 +211,28 @@ foamClean=$WM_PROJECT_DIR/bin/foamCleanPath
#- Clean PATH
cleaned=`$foamClean "$PATH" "$foamOldDirs"` && PATH="$cleaned"
-#- Clean LD_LIBRARY_PATH
-cleaned=`$foamClean "$LD_LIBRARY_PATH" "$foamOldDirs"` \
- && LD_LIBRARY_PATH="$cleaned"
+if _foamOnOSX
+then
+ #- Clean DYLD_LIBRARY_PATH
+ cleaned=`$foamClean "$DYLD_LIBRARY_PATH" "$foamOldDirs"` \
+ && DYLD_LIBRARY_PATH="$cleaned"
+else
+ #- Clean LD_LIBRARY_PATH
+ cleaned=`$foamClean "$LD_LIBRARY_PATH" "$foamOldDirs"` \
+ && LD_LIBRARY_PATH="$cleaned"
+fi
#- Clean MANPATH
cleaned=`$foamClean "$MANPATH" "$foamOldDirs"` && MANPATH="$cleaned"
-export PATH LD_LIBRARY_PATH MANPATH
+export PATH MANPATH
+
+if _foamOnOSX
+then
+ export DYLD_LIBRARY_PATH
+else
+ export LD_LIBRARY_PATH
+fi
# Source project setup files
@@ -217,14 +243,16 @@ _foamSource $WM_PROJECT_DIR/etc/config/aliases.sh
# Source user setup files for optional packages
# ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-_foamSource `$WM_PROJECT_DIR/bin/foamEtcFile config/paraview.sh`
+_foamOnOSX \
+ && _foamSource `$WM_PROJECT_DIR/bin/foamEtcFile config/paraview-osx.sh` \
+ || _foamSource `$WM_PROJECT_DIR/bin/foamEtcFile config/paraview.sh`
+_foamOnOSX || {
_foamSource `$WM_PROJECT_DIR/bin/foamEtcFile config/ensight.sh`
_foamSource `$WM_PROJECT_DIR/bin/foamEtcFile config/gperftools.sh`
+}
-if [ ! -z "$FOAMY_HEX_MESH" ]
-then
- _foamSource `$WM_PROJECT_DIR/bin/foamEtcFile config/CGAL.sh`
-fi
+[ ! -z "$FOAMY_HEX_MESH" ] \
+ && _foamSource `$WM_PROJECT_DIR/bin/foamEtcFile config/CGAL.sh`
# Clean environment paths again. Only remove duplicates
@@ -232,13 +260,27 @@ fi
#- Clean PATH
cleaned=`$foamClean "$PATH"` && PATH="$cleaned"
-#- Clean LD_LIBRARY_PATH
-cleaned=`$foamClean "$LD_LIBRARY_PATH"` && LD_LIBRARY_PATH="$cleaned"
+if _foamOnOSX
+then
+ #- Clean DYLD_LIBRARY_PATH
+ cleaned=`$foamClean "$DYLD_LIBRARY_PATH"` \
+ && DYLD_LIBRARY_PATH="$cleaned"
+else
+ #- Clean LD_LIBRARY_PATH
+ cleaned=`$foamClean "$LD_LIBRARY_PATH"` && LD_LIBRARY_PATH="$cleaned"
+fi
#- Clean MANPATH (trailing ':' to find system pages)
cleaned=`$foamClean "$MANPATH"`: && MANPATH="$cleaned"
-export PATH LD_LIBRARY_PATH MANPATH
+export PATH MANPATH
+
+if _foamOnOSX
+then
+ export DYLD_LIBRARY_PATH
+else
+ export LD_LIBRARY_PATH
+fi
#- Clean LD_PRELOAD
if [ -n "$LD_PRELOAD" ]
@@ -251,6 +293,6 @@ fi
# cleanup environment:
# ~~~~~~~~~~~~~~~~~~~~
unset cleaned foamClean foamInstall foamOldDirs
-unset _foamSource _foamEval
+unset _foamSource _foamEval _foamOnOSX
# ----------------------------------------------------------------- end-of-file
diff --git a/etc/config/CGAL.sh b/etc/config/CGAL.sh
index 7a59fc6e..61383404 100644
--- a/etc/config/CGAL.sh
+++ b/etc/config/CGAL.sh
@@ -29,11 +29,54 @@
# Sourced from OpenFOAM-<VERSION>/etc/bashrc
#------------------------------------------------------------------------------
-boost_version=boost-system
-cgal_version=CGAL-4.7
+if [ "$(uname -s)" = "Darwin" ]
+then
+ cgal_version=
+ _have_brew=$(which -s brew && echo "Y")
+ _have_port=$(which -s port && echo "Y")
+
+ if [ -n "$_have_brew" ]
+ then
+ _brew_prefix="$(brew --prefix)"
+ boost_version="boost-$(basename $(readlink "$_brew_prefix/opt/boost"))"
+ cgal_version="CGAL-$(basename $(readlink "$_brew_prefix/opt/cgal"))"
+
+ export BOOST_ARCH_PATH="$_brew_prefix/opt/boost"
+ export CGAL_ARCH_PATH="$_brew_prefix/opt/cgal"
+ export GMP_ARCH_PATH="$_brew_prefix/opt/gmp"
+ export MPFR_ARCH_PATH="$_brew_prefix/opt/mpfr"
+
+ unset _brew_prefix
+ elif [ -n "$_have_port" ]
+ then
+ _port_prefix=$(dirname $(dirname $(which port)))
+ boost_version="boost-macports"
+ cgal_version="CGAL-macports"
+
+ export BOOST_ARCH_PATH="$_port_prefix"
+ export CGAL_ARCH_PATH="$_port_prefix"
+ export GMP_ARCH_PATH="$_port_prefix"
+ export MPFR_ARCH_PATH="$_port_prefix"
-export BOOST_ARCH_PATH=$WM_THIRD_PARTY_DIR/platforms/$WM_ARCH$WM_COMPILER/$boost_version
-export CGAL_ARCH_PATH=$WM_THIRD_PARTY_DIR/platforms/$WM_ARCH$WM_COMPILER/$cgal_version
+ unset _port_prefix
+ else
+ boost_version="boost-unknown"
+ cgal_version="CGAL-unknown"
+
+ export BOOST_ARCH_PATH="/usr/local"
+ export CGAL_ARCH_PATH="/usr/local"
+ export GMP_ARCH_PATH="/usr/local"
+ export MPFR_ARCH_PATH="/usr/local"
+ fi
+
+ unset _have_brew _have_port
+else
+ boost_version=boost-system
+ cgal_version=CGAL-4.7
+
+ export BOOST_ARCH_PATH=$WM_THIRD_PARTY_DIR/platforms/$WM_ARCH$WM_COMPILER/$boost_version
+ export CGAL_ARCH_PATH=$WM_THIRD_PARTY_DIR/platforms/$WM_ARCH$WM_COMPILER/$cgal_version
+fi
if [ "$FOAM_VERBOSE" -a "$PS1" ]
then
@@ -44,12 +87,12 @@ fi
if [ -d "$CGAL_ARCH_PATH" ]
then
- _foamAddLib $CGAL_ARCH_PATH/lib
+ _foamOnOSX || _foamAddLib "$CGAL_ARCH_PATH/lib"
fi
if [ -d "$BOOST_ARCH_PATH" ]
then
- _foamAddLib $BOOST_ARCH_PATH/lib
+ _foamOnOSX || _foamAddLib "$BOOST_ARCH_PATH/lib"
fi
unset boost_version cgal_version
diff --git a/etc/config/metis.sh b/etc/config/metis.sh
index af7efde3..51a927e6 100644
--- a/etc/config/metis.sh
+++ b/etc/config/metis.sh
@@ -33,7 +33,42 @@
# during the wmake process
#------------------------------------------------------------------------------
-export METIS_VERSION=metis-5.1.0
-export METIS_ARCH_PATH=$WM_THIRD_PARTY_DIR/platforms/$WM_ARCH$WM_COMPILER/$METIS_VERSION
+if [ "$(uname -s)" = "Darwin" ]
+then
+ METIS_VERSION=
+
+ set +e
+ _have_brew=$(which -s brew && echo "Y")
+ _have_port=$(which -s port && echo "Y")
+ set -e
+
+ if [ -n "$_have_brew" ]
+ then