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replace or upgrade delly #1011

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anoronh4 opened this issue May 20, 2024 · 0 comments
Open

replace or upgrade delly #1011

anoronh4 opened this issue May 20, 2024 · 0 comments
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somatic analysis related to post-alignment analysis of the tumor sample

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Delly is consistently very slow for certain samples, specifically WGS samples, especially if they are high coverage or have a lot of alterations. Currently we are running v0.8.2. We might consider to upgrade this or replace with another caller such as lumpy or gridss.
@anoronh4 anoronh4 added the somatic analysis related to post-alignment analysis of the tumor sample label May 20, 2024
@anoronh4 anoronh4 self-assigned this May 20, 2024
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