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Update oncoKB annotator version #936

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gongyixiao opened this issue Jan 22, 2022 · 1 comment
Open

Update oncoKB annotator version #936

gongyixiao opened this issue Jan 22, 2022 · 1 comment
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enhancement New feature or request

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@gongyixiao
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gongyixiao commented Jan 22, 2022 •
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Hongxin Zhang suggested us to update to newer version of oncoKB soon since the legacy url will be deprecated eventually and there are also many bug fixes and enhancement been done in newer version of oncoKB.

We are using v1.1.0 which from 2019
But also need to notice that using newer version of oncoKB will result in columns/column names changed in the maf, which requires careful testing before doing so.
@gongyixiao gongyixiao added the enhancement New feature or request label Jan 22, 2022
@gongyixiao gongyixiao mentioned this issue Jan 22, 2022
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https://github.com/mskcc/tempo/tree/feature/oncoKB_Annotator_v2

Seems like there was a branch working on this long time ago

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